RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TONSLQ96HA7 1378 aa6.66□□□□□ -1.34
USP44-201ENST00000258499 RAB3GAP2Q9H2M9 1393 aa6.65□□□□□ -1.34
USP44-201ENST00000258499 RNF39Q9H2S5 420 aa6.65□□□□□ -1.35
USP44-201ENST00000258499 KIF21BO75037 1637 aa6.65□□□□□ -1.35
USP44-201ENST00000258499 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.35
USP44-201ENST00000258499 HNRNPUQ00839 825 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP44-201ENST00000258499 CUX2O14529 1486 aa6.64□□□□□ -1.35
USP44-201ENST00000258499 EIF4G1Q04637 1599 aaKnown RBP6.63□□□□□ -1.35
USP44-201ENST00000258499 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
USP44-201ENST00000258499 PPP6R1Q9UPN7 881 aa6.63□□□□□ -1.35
USP44-201ENST00000258499 CARMIL1Q5VZK9 1371 aa6.63□□□□□ -1.35
USP44-201ENST00000258499 RRP7BPQ9NSQ0 103 aa6.62□□□□□ -1.35
USP44-201ENST00000258499 MTUS2Q5JR59 1369 aa6.62□□□□□ -1.35
USP44-201ENST00000258499 DNAJC5BQ9UF47 199 aa6.6□□□□□ -1.35
USP44-201ENST00000258499 ARAP1Q96P48 1450 aa6.6□□□□□ -1.35
USP44-201ENST00000258499 SETD5Q9C0A6 1442 aa6.6□□□□□ -1.35
USP44-201ENST00000258499 FAM9BQ8IZU0 186 aa6.6□□□□□ -1.35
USP44-201ENST00000258499 TSHZ2Q9NRE2 1034 aa6.6□□□□□ -1.35
USP44-201ENST00000258499 CDK11AQ9UQ88 783 aaPredicted RBP6.59□□□□□ -1.36
USP44-201ENST00000258499 SENP3-EIF4A1A0A087X0R7 540 aa6.58□□□□□ -1.36
USP44-201ENST00000258499 PPP1R15AO75807 674 aaPredicted RBP6.56□□□□□ -1.36
USP44-201ENST00000258499 PRXQ9BXM0 1461 aa6.56□□□□□ -1.36
USP44-201ENST00000258499 FHOD3Q2V2M9 1422 aa6.56□□□□□ -1.36
USP44-201ENST00000258499 IGF1RP08069 1367 aa6.56□□□□□ -1.36
USP44-201ENST00000258499 ZNF777Q9ULD5 760 aaPredicted RBP6.56□□□□□ -1.36
USP44-201ENST00000258499 FHAD1B1AJZ9 1412 aa6.56□□□□□ -1.36
USP44-201ENST00000258499 BICRAQ9NZM4 1560 aa6.55□□□□□ -1.36
USP44-201ENST00000258499 ANP32EQ9BTT0 268 aa6.55□□□□□ -1.36
USP44-201ENST00000258499 PHLDB1Q86UU1 1377 aa6.55□□□□□ -1.36
USP44-201ENST00000258499 ARHGAP35Q9NRY4 1499 aa6.55□□□□□ -1.36
USP44-201ENST00000258499 FBLN2P98095 1184 aa6.54□□□□□ -1.36
USP44-201ENST00000258499 MRS2Q9HD23 443 aa6.54□□□□□ -1.36
USP44-201ENST00000258499 RRBP1Q9P2E9 1410 aaKnown RBP6.54□□□□□ -1.36
USP44-201ENST00000258499 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP44-201ENST00000258499 CADPSQ9ULU8 1353 aa6.52□□□□□ -1.37
USP44-201ENST00000258499 RBM19Q9Y4C8 960 aaKnown RBP6.52□□□□□ -1.37
USP44-201ENST00000258499 TOP2BQ02880 1626 aa6.52□□□□□ -1.37
USP44-201ENST00000258499 CUX1P39880 1505 aa6.52□□□□□ -1.37
USP44-201ENST00000258499 TDRD9Q8NDG6 1382 aaKnown RBP6.52□□□□□ -1.37
USP44-201ENST00000258499 TIMELESSQ9UNS1 1208 aa6.52□□□□□ -1.37
USP44-201ENST00000258499 CCER2I3L3R5 266 aa6.51□□□□□ -1.37
USP44-201ENST00000258499 ERICH3Q5RHP9 1530 aa6.51□□□□□ -1.37
USP44-201ENST00000258499 HSPA5P11021 654 aaKnown RBP6.51□□□□□ -1.37
USP44-201ENST00000258499 SLC4A1APQ9BWU0 796 aaKnown RBP6.51□□□□□ -1.37
USP44-201ENST00000258499 SALL2Q9Y467 1007 aaPredicted RBP6.51□□□□□ -1.37
USP44-201ENST00000258499 UNC13AQ9UPW8 1703 aa6.5□□□□□ -1.37
USP44-201ENST00000258499 C1QBPQ07021 282 aaKnown RBP6.5□□□□□ -1.37
USP44-201ENST00000258499 NCAPD3P42695 1498 aa6.49□□□□□ -1.37
USP44-201ENST00000258499 LRRC9Q6ZRR7 1453 aa6.49□□□□□ -1.37
USP44-201ENST00000258499 FGD5Q6ZNL6 1462 aa6.49□□□□□ -1.37
USP44-201ENST00000258499 B4GALNT3Q6L9W6 998 aa6.49□□□□□ -1.37
USP44-201ENST00000258499 KDM2AQ9Y2K7 1162 aa6.48□□□□□ -1.37
USP44-201ENST00000258499 CFTRP13569 1480 aa6.48□□□□□ -1.37
USP44-201ENST00000258499 RAD54L2Q9Y4B4 1467 aa6.48□□□□□ -1.37
USP44-201ENST00000258499 PEG3Q9GZU2 1588 aa6.47□□□□□ -1.37
USP44-201ENST00000258499 L3MBTL2Q969R5 705 aa6.47□□□□□ -1.37
USP44-201ENST00000258499 WDR97A6NE52 1622 aa6.46□□□□□ -1.37
USP44-201ENST00000258499 TMC1Q8TDI8 760 aa6.46□□□□□ -1.38
USP44-201ENST00000258499 FMN1Q68DA7 1419 aa6.46□□□□□ -1.38
USP44-201ENST00000258499 NBR1Q14596 966 aa6.46□□□□□ -1.38
USP44-201ENST00000258499 CCDC136Q96JN2 1154 aa6.46□□□□□ -1.38
USP44-201ENST00000258499 MPHOSPH9Q99550 1183 aa6.46□□□□□ -1.38
USP44-201ENST00000258499 NPM2Q86SE8 214 aaKnown RBP6.45□□□□□ -1.38
USP44-201ENST00000258499 SLC24A1O60721 1099 aa6.45□□□□□ -1.38
USP44-201ENST00000258499 FANCD2Q9BXW9 1451 aa6.45□□□□□ -1.38
USP44-201ENST00000258499 CCDC18Q5T9S5 1454 aa6.45□□□□□ -1.38
USP44-201ENST00000258499 PPP4R2Q9NY27 417 aa6.44□□□□□ -1.38
USP44-201ENST00000258499 FGD6Q6ZV73 1430 aa6.44□□□□□ -1.38
USP44-201ENST00000258499 TIAM1Q13009 1591 aa6.43□□□□□ -1.38
USP44-201ENST00000258499 RTL5Q5HYW3 569 aaPredicted RBP6.43□□□□□ -1.38
USP44-201ENST00000258499 CFDP1Q9UEE9 299 aaPredicted RBP6.43□□□□□ -1.38
USP44-201ENST00000258499 MYT1LQ9UL68 1186 aa6.43□□□□□ -1.38
USP44-201ENST00000258499 ANP32AP39687 249 aaKnown RBP6.42□□□□□ -1.38
USP44-201ENST00000258499 WASHC2AQ641Q2 1341 aa6.42□□□□□ -1.38
USP44-201ENST00000258499 ADRA2BP18089 450 aa6.42□□□□□ -1.38
USP44-201ENST00000258499 CCDC184Q52MB2 194 aa6.41□□□□□ -1.38
USP44-201ENST00000258499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.41□□□□□ -1.38
USP44-201ENST00000258499 MAPKBP1O60336 1514 aa6.41□□□□□ -1.38
USP44-201ENST00000258499 RGL3Q3MIN7 710 aa6.41□□□□□ -1.38
USP44-201ENST00000258499 CHMP7Q8WUX9 453 aaPredicted RBP6.41□□□□□ -1.38
USP44-201ENST00000258499 PRKRIP1Q9H875 184 aaPredicted RBP6.41□□□□□ -1.38
USP44-201ENST00000258499 UACAQ9BZF9 1416 aa6.4□□□□□ -1.38
USP44-201ENST00000258499 CASKIN1Q8WXD9 1431 aa6.4□□□□□ -1.38
USP44-201ENST00000258499 CARD11Q9BXL7 1154 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 BCL11AQ9H165 835 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 BIVM-ERCC5R4GMW8 1640 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 TSPY4P0CV99 314 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 TSPY10P0CW01 314 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 ZNF644Q9H582 1327 aaPredicted RBP6.4□□□□□ -1.39
USP44-201ENST00000258499 NESP48681 1621 aa6.4□□□□□ -1.39
USP44-201ENST00000258499 DAXXQ9UER7 740 aaPredicted RBP6.39□□□□□ -1.39
USP44-201ENST00000258499 PKD2Q13563 968 aa6.39□□□□□ -1.39
USP44-201ENST00000258499 MYOM3Q5VTT5 1437 aa6.38□□□□□ -1.39
USP44-201ENST00000258499 NCOA2Q15596 1464 aa6.38□□□□□ -1.39
USP44-201ENST00000258499 PCF11O94913 1555 aaKnown RBP6.37□□□□□ -1.39
USP44-201ENST00000258499 FYCO1Q9BQS8 1478 aa6.37□□□□□ -1.39
USP44-201ENST00000258499 POLA1P09884 1462 aaPredicted RBP6.37□□□□□ -1.39
USP44-201ENST00000258499 DCAF11Q8TEB1 546 aa6.37□□□□□ -1.39
USP44-201ENST00000258499 ZBTB47Q9UFB7 747 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms