RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.31
USP30-201ENST00000257548 ANP32AP39687 249 aaKnown RBP17.02■□□□□ 0.31
USP30-201ENST00000257548 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
USP30-201ENST00000257548 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
USP30-201ENST00000257548 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
USP30-201ENST00000257548 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
USP30-201ENST00000257548 MSH5O43196 834 aa16.94■□□□□ 0.3
USP30-201ENST00000257548 ZNF326Q5BKZ1 582 aaKnown RBP16.94■□□□□ 0.3
USP30-201ENST00000257548 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
USP30-201ENST00000257548 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
USP30-201ENST00000257548 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
USP30-201ENST00000257548 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
USP30-201ENST00000257548 EEA1Q15075 1411 aa16.89■□□□□ 0.29
USP30-201ENST00000257548 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
USP30-201ENST00000257548 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
USP30-201ENST00000257548 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
USP30-201ENST00000257548 VPS8Q8N3P4 1428 aa16.85■□□□□ 0.29
USP30-201ENST00000257548 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
USP30-201ENST00000257548 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
USP30-201ENST00000257548 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.29
USP30-201ENST00000257548 ARID3CA6NKF2 412 aa16.83■□□□□ 0.28
USP30-201ENST00000257548 PRKCSHP14314 528 aaPredicted RBP16.83■□□□□ 0.28
USP30-201ENST00000257548 CHIC2Q9UKJ5 165 aa16.81■□□□□ 0.28
USP30-201ENST00000257548 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
USP30-201ENST00000257548 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
USP30-201ENST00000257548 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
USP30-201ENST00000257548 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
USP30-201ENST00000257548 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
USP30-201ENST00000257548 ARXQ96QS3 562 aa16.74■□□□□ 0.27
USP30-201ENST00000257548 NEFMP07197 916 aa16.73■□□□□ 0.27
USP30-201ENST00000257548 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
USP30-201ENST00000257548 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
USP30-201ENST00000257548 KIF21BO75037 1637 aa16.7■□□□□ 0.26
USP30-201ENST00000257548 CUX1P39880 1505 aa16.68■□□□□ 0.26
USP30-201ENST00000257548 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
USP30-201ENST00000257548 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
USP30-201ENST00000257548 IL27Q8NEV9 243 aa16.66■□□□□ 0.26
USP30-201ENST00000257548 CUX2O14529 1486 aa16.66■□□□□ 0.26
USP30-201ENST00000257548 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP30-201ENST00000257548 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
USP30-201ENST00000257548 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
USP30-201ENST00000257548 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
USP30-201ENST00000257548 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
USP30-201ENST00000257548 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
USP30-201ENST00000257548 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
USP30-201ENST00000257548 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
USP30-201ENST00000257548 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
USP30-201ENST00000257548 FOXD1Q16676 465 aa16.57■□□□□ 0.24
USP30-201ENST00000257548 IGF1RP08069 1367 aa16.56■□□□□ 0.24
USP30-201ENST00000257548 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
USP30-201ENST00000257548 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
USP30-201ENST00000257548 NESP48681 1621 aa16.55■□□□□ 0.24
USP30-201ENST00000257548 CFTRP13569 1480 aa16.55■□□□□ 0.24
USP30-201ENST00000257548 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
USP30-201ENST00000257548 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
USP30-201ENST00000257548 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
USP30-201ENST00000257548 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
USP30-201ENST00000257548 SLC4A3P48751 1232 aa16.49■□□□□ 0.23
USP30-201ENST00000257548 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
USP30-201ENST00000257548 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
USP30-201ENST00000257548 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
USP30-201ENST00000257548 MTUS2Q5JR59 1369 aa16.44■□□□□ 0.22
USP30-201ENST00000257548 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
USP30-201ENST00000257548 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
USP30-201ENST00000257548 TIMELESSQ9UNS1 1208 aa16.43■□□□□ 0.22
USP30-201ENST00000257548 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
USP30-201ENST00000257548 ERICH6BQ5W0A0 696 aa16.41■□□□□ 0.22
USP30-201ENST00000257548 PRKRIP1Q9H875 184 aaPredicted RBP16.41■□□□□ 0.22
USP30-201ENST00000257548 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
USP30-201ENST00000257548 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
USP30-201ENST00000257548 BIVM-ERCC5R4GMW8 1640 aa16.4■□□□□ 0.22
USP30-201ENST00000257548 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
USP30-201ENST00000257548 RGS3P49796 1198 aa16.4■□□□□ 0.22
USP30-201ENST00000257548 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
USP30-201ENST00000257548 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
USP30-201ENST00000257548 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
USP30-201ENST00000257548 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
USP30-201ENST00000257548 WASHC2AQ641Q2 1341 aa16.37■□□□□ 0.21
USP30-201ENST00000257548 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
USP30-201ENST00000257548 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
USP30-201ENST00000257548 EXOC6Q8TAG9 804 aa16.34■□□□□ 0.21
USP30-201ENST00000257548 NUDCQ9Y266 331 aa16.33■□□□□ 0.2
USP30-201ENST00000257548 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
USP30-201ENST00000257548 PLIN1O60240 522 aa16.32■□□□□ 0.2
USP30-201ENST00000257548 PDE4AP27815 886 aa16.32■□□□□ 0.2
USP30-201ENST00000257548 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
USP30-201ENST00000257548 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
USP30-201ENST00000257548 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
USP30-201ENST00000257548 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
USP30-201ENST00000257548 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
USP30-201ENST00000257548 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
USP30-201ENST00000257548 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
USP30-201ENST00000257548 FBLN2P98095 1184 aa16.26■□□□□ 0.19
USP30-201ENST00000257548 RCAN3Q9UKA8 241 aa16.26■□□□□ 0.19
USP30-201ENST00000257548 NAP1L5Q96NT1 182 aaPredicted RBP16.24■□□□□ 0.19
USP30-201ENST00000257548 GSE1Q14687 1217 aa16.24■□□□□ 0.19
USP30-201ENST00000257548 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
USP30-201ENST00000257548 C11orf95C9JLR9 678 aaPredicted RBP16.23■□□□□ 0.19
USP30-201ENST00000257548 SLKQ9H2G2 1235 aaPredicted RBP16.23■□□□□ 0.19
USP30-201ENST00000257548 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms