RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 TIAM1Q13009 1591 aa38.53■■■■□ 3.76
ACTR3B-201ENST00000256001 MAP3K1Q13233 1512 aa38.53■■■■□ 3.76
ACTR3B-201ENST00000256001 RRBP1Q9P2E9 1410 aaKnown RBP38.52■■■■□ 3.76
ACTR3B-201ENST00000256001 EFCAB5A4FU69 1503 aa38.5■■■■□ 3.75
ACTR3B-201ENST00000256001 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
ACTR3B-201ENST00000256001 FHOD3Q2V2M9 1422 aa38.49■■■■□ 3.75
ACTR3B-201ENST00000256001 PCF11O94913 1555 aaKnown RBP38.43■■■■□ 3.74
ACTR3B-201ENST00000256001 CCNB3Q8WWL7 1395 aa38.4■■■■□ 3.74
ACTR3B-201ENST00000256001 ATP1B4Q9UN42 357 aaPredicted RBP38.38■■■■□ 3.73
ACTR3B-201ENST00000256001 LRRC9Q6ZRR7 1453 aa38.38■■■■□ 3.73
ACTR3B-201ENST00000256001 FYCO1Q9BQS8 1478 aa38.31■■■■□ 3.72
ACTR3B-201ENST00000256001 CFAP43Q8NDM7 1665 aa38.31■■■■□ 3.72
ACTR3B-201ENST00000256001 AQRO60306 1485 aaKnown RBP eCLIP38.3■■■■□ 3.721e-6■■■■■ 33.8
ACTR3B-201ENST00000256001 CASKIN1Q8WXD9 1431 aa38.29■■■■□ 3.72
ACTR3B-201ENST00000256001 PBRM1Q86U86 1689 aa38.28■■■■□ 3.72
ACTR3B-201ENST00000256001 FMN1Q68DA7 1419 aa38.25■■■■□ 3.71
ACTR3B-201ENST00000256001 SAMD9Q5K651 1589 aa38.22■■■■□ 3.71
ACTR3B-201ENST00000256001 WDR62O43379 1518 aa38.2■■■■□ 3.71
ACTR3B-201ENST00000256001 ITGAEP38570 1179 aa38.18■■■■□ 3.7
ACTR3B-201ENST00000256001 PHLDB1Q86UU1 1377 aa38.18■■■■□ 3.7
ACTR3B-201ENST00000256001 IFT140Q96RY7 1462 aa38.17■■■■□ 3.7
ACTR3B-201ENST00000256001 GRIN2BQ13224 1484 aa38.15■■■■□ 3.7
ACTR3B-201ENST00000256001 ADAMTS12P58397 1594 aa38.13■■■■□ 3.69
ACTR3B-201ENST00000256001 SNAPC4Q5SXM2 1469 aa38.13■■■■□ 3.69
ACTR3B-201ENST00000256001 DHX57Q6P158 1386 aaKnown RBP38.11■■■■□ 3.69
ACTR3B-201ENST00000256001 ZNF608Q9ULD9 1512 aaPredicted RBP38.1■■■■□ 3.69
ACTR3B-201ENST00000256001 ERCC6Q03468 1493 aa38.08■■■■□ 3.69
ACTR3B-201ENST00000256001 CLSPNQ9HAW4 1339 aa38.05■■■■□ 3.68
ACTR3B-201ENST00000256001 FAM50AQ14320 339 aaKnown RBP38■■■■□ 3.67
ACTR3B-201ENST00000256001 IQGAP2Q13576 1575 aa37.98■■■■□ 3.67
ACTR3B-201ENST00000256001 ZNF316A6NFI3 1004 aaPredicted RBP37.96■■■■□ 3.67
ACTR3B-201ENST00000256001 DIEXFQ68CQ4 756 aaKnown RBP37.96■■■■□ 3.67
ACTR3B-201ENST00000256001 MTUS2Q5JR59 1369 aa37.92■■■■□ 3.66
ACTR3B-201ENST00000256001 LRRIQ1Q96JM4 1722 aa37.9■■■■□ 3.66
ACTR3B-201ENST00000256001 THOC2Q8NI27 1593 aaKnown RBP37.88■■■■□ 3.65
ACTR3B-201ENST00000256001 RAB3GAP2Q9H2M9 1393 aa37.88■■■■□ 3.65
ACTR3B-201ENST00000256001 EIF4G3O43432 1585 aaKnown RBP37.87■■■■□ 3.65
ACTR3B-201ENST00000256001 SETD5Q9C0A6 1442 aa37.82■■■■□ 3.64
ACTR3B-201ENST00000256001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.78■■■■□ 3.64
ACTR3B-201ENST00000256001 FGD6Q6ZV73 1430 aa37.76■■■■□ 3.64
ACTR3B-201ENST00000256001 UGGT2Q9NYU1 1516 aa37.76■■■■□ 3.63
ACTR3B-201ENST00000256001 KIAA0586Q9BVV6 1533 aa37.73■■■■□ 3.63
ACTR3B-201ENST00000256001 GRIN2AQ12879 1464 aa37.72■■■■□ 3.63
ACTR3B-201ENST00000256001 CCDC18Q5T9S5 1454 aa37.72■■■■□ 3.63
ACTR3B-201ENST00000256001 NCOA2Q15596 1464 aa37.71■■■■□ 3.63
ACTR3B-201ENST00000256001 EHBP1L1Q8N3D4 1523 aa37.7■■■■□ 3.63
ACTR3B-201ENST00000256001 HECW1Q76N89 1606 aa37.7■■■■□ 3.63
ACTR3B-201ENST00000256001 SUPT6HQ7KZ85 1726 aaKnown RBP37.67■■■■□ 3.62
ACTR3B-201ENST00000256001 MAGI1Q96QZ7 1491 aaPredicted RBP37.66■■■■□ 3.62
ACTR3B-201ENST00000256001 MAGI3Q5TCQ9 1506 aa37.62■■■■□ 3.61
ACTR3B-201ENST00000256001 MYOM3Q5VTT5 1437 aa37.62■■■■□ 3.61
ACTR3B-201ENST00000256001 EPRSP07814 1512 aaKnown RBP37.61■■■■□ 3.61
ACTR3B-201ENST00000256001 CHMP7Q8WUX9 453 aaPredicted RBP37.6■■■■□ 3.61
ACTR3B-201ENST00000256001 DISP1Q96F81 1524 aa37.58■■■■□ 3.61
ACTR3B-201ENST00000256001 MAPKBP1O60336 1514 aa37.57■■■■□ 3.6
ACTR3B-201ENST00000256001 KIAA0556O60303 1618 aa37.57■■■■□ 3.6
ACTR3B-201ENST00000256001 SYNJ2O15056 1496 aa37.56■■■■□ 3.6
ACTR3B-201ENST00000256001 ARHGEF11O15085 1522 aa37.53■■■■□ 3.6
ACTR3B-201ENST00000256001 CDK13Q14004 1512 aaKnown RBP37.53■■■■□ 3.6
ACTR3B-201ENST00000256001 FBLN2P98095 1184 aa37.52■■■■□ 3.6
ACTR3B-201ENST00000256001 ARID3CA6NKF2 412 aa37.51■■■■□ 3.6
ACTR3B-201ENST00000256001 CEP170Q5SW79 1584 aa37.47■■■■□ 3.59
ACTR3B-201ENST00000256001 PTPRKQ15262 1439 aa37.46■■■■□ 3.59
ACTR3B-201ENST00000256001 PTPN23Q9H3S7 1636 aa37.44■■■■□ 3.58
ACTR3B-201ENST00000256001 HFM1A2PYH4 1435 aa37.37■■■■□ 3.57
ACTR3B-201ENST00000256001 RAPGEF6Q8TEU7 1601 aa37.34■■■■□ 3.57
ACTR3B-201ENST00000256001 NUP153P49790 1475 aaKnown RBP37.34■■■■□ 3.57
ACTR3B-201ENST00000256001 NUP160Q12769 1436 aa37.34■■■■□ 3.57
ACTR3B-201ENST00000256001 TCOF1Q13428 1488 aaKnown RBP37.32■■■■□ 3.56
ACTR3B-201ENST00000256001 SIN3AQ96ST3 1273 aa37.3■■■■□ 3.56
ACTR3B-201ENST00000256001 JPH4Q96JJ6 628 aa37.28■■■■□ 3.56
ACTR3B-201ENST00000256001 NEUROD1Q13562 356 aa37.27■■■■□ 3.56
ACTR3B-201ENST00000256001 NAIPQ13075 1403 aa37.27■■■■□ 3.56
ACTR3B-201ENST00000256001 MIA2Q96PC5 1412 aa37.26■■■■□ 3.56
ACTR3B-201ENST00000256001 CARMIL2Q6F5E8 1435 aa37.24■■■■□ 3.55
ACTR3B-201ENST00000256001 MIER1Q8N108 512 aa37.22■■■■□ 3.55
ACTR3B-201ENST00000256001 CDK11AQ9UQ88 783 aaPredicted RBP37.22■■■■□ 3.55
ACTR3B-201ENST00000256001 UACAQ9BZF9 1416 aa37.19■■■■□ 3.54
ACTR3B-201ENST00000256001 PLB1Q6P1J6 1458 aa37.18■■■■□ 3.54
ACTR3B-201ENST00000256001 CHIC2Q9UKJ5 165 aa37.17■■■■□ 3.54
ACTR3B-201ENST00000256001 RRP7BPQ9NSQ0 103 aa37.14■■■■□ 3.54
ACTR3B-201ENST00000256001 TIMELESSQ9UNS1 1208 aa37.12■■■■□ 3.53
ACTR3B-201ENST00000256001 PRG4Q92954 1404 aaPredicted RBP37.06■■■■□ 3.52
ACTR3B-201ENST00000256001 ACIN1Q9UKV3 1341 aaKnown RBP37.06■■■■□ 3.52
ACTR3B-201ENST00000256001 CENPBP07199 599 aaPredicted RBP37.06■■■■□ 3.52
ACTR3B-201ENST00000256001 TROQ12816 1431 aaPredicted RBP37.05■■■■□ 3.52
ACTR3B-201ENST00000256001 AKNAQ7Z591 1439 aa37.04■■■■□ 3.52
ACTR3B-201ENST00000256001 GCC2Q8IWJ2 1684 aa37.03■■■■□ 3.52
ACTR3B-201ENST00000256001 SCAF1Q9H7N4 1312 aaKnown RBP37■■■■□ 3.51
ACTR3B-201ENST00000256001 ZNF644Q9H582 1327 aaPredicted RBP36.97■■■■□ 3.51
ACTR3B-201ENST00000256001 DAPK1P53355 1430 aa36.96■■■■□ 3.51
ACTR3B-201ENST00000256001 PPP1R15AO75807 674 aaPredicted RBP36.94■■■■□ 3.5
ACTR3B-201ENST00000256001 ABCA8O94911 1581 aa36.93■■■■□ 3.5
ACTR3B-201ENST00000256001 TRIM52Q96A61 297 aa36.91■■■■□ 3.5
ACTR3B-201ENST00000256001 KDM6BO15054 1643 aa36.91■■■■□ 3.5
ACTR3B-201ENST00000256001 TONSLQ96HA7 1378 aa36.91■■■■□ 3.5
ACTR3B-201ENST00000256001 ABCC5O15440 1437 aa36.91■■■■□ 3.5
ACTR3B-201ENST00000256001 DNMT1P26358 1616 aaKnown RBP36.9■■■■□ 3.5
ACTR3B-201ENST00000256001 YTHDC1Q96MU7 727 aaKnown RBP36.9■■■■□ 3.5
ACTR3B-201ENST00000256001 KIF14Q15058 1648 aa36.88■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms