RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 SALL2Q9Y467 1007 aaPredicted RBP14.6□□□□□ -0.07
DCLK1-201ENST00000255448 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
DCLK1-201ENST00000255448 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
DCLK1-201ENST00000255448 CHGAP10645 457 aaKnown RBP14.57□□□□□ -0.08
DCLK1-201ENST00000255448 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
DCLK1-201ENST00000255448 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
DCLK1-201ENST00000255448 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
DCLK1-201ENST00000255448 CDK11BP21127 795 aaKnown RBP14.55□□□□□ -0.08
DCLK1-201ENST00000255448 EEA1Q15075 1411 aa14.55□□□□□ -0.08
DCLK1-201ENST00000255448 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
DCLK1-201ENST00000255448 MRS2Q9HD23 443 aa14.53□□□□□ -0.08
DCLK1-201ENST00000255448 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.09
DCLK1-201ENST00000255448 CLIP1P30622 1438 aa14.5□□□□□ -0.09
DCLK1-201ENST00000255448 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
DCLK1-201ENST00000255448 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
DCLK1-201ENST00000255448 BECN1Q14457 450 aa14.49□□□□□ -0.09
DCLK1-201ENST00000255448 HIRIP3Q9BW71 556 aaPredicted RBP14.49□□□□□ -0.09
DCLK1-201ENST00000255448 PPP4R2Q9NY27 417 aa14.48□□□□□ -0.09
DCLK1-201ENST00000255448 CHIC2Q9UKJ5 165 aa14.47□□□□□ -0.09
DCLK1-201ENST00000255448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
DCLK1-201ENST00000255448 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.46□□□□□ -0.09
DCLK1-201ENST00000255448 PRKCSHP14314 528 aaPredicted RBP14.46□□□□□ -0.09
DCLK1-201ENST00000255448 TMC1Q8TDI8 760 aa14.46□□□□□ -0.1
DCLK1-201ENST00000255448 DNTTIP2Q5QJE6 756 aaKnown RBP14.45□□□□□ -0.1
DCLK1-201ENST00000255448 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
DCLK1-201ENST00000255448 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
DCLK1-201ENST00000255448 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
DCLK1-201ENST00000255448 B4GALNT3Q6L9W6 998 aa14.42□□□□□ -0.1
DCLK1-201ENST00000255448 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
DCLK1-201ENST00000255448 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
DCLK1-201ENST00000255448 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
DCLK1-201ENST00000255448 VSIG10Q8N0Z9 540 aa14.4□□□□□ -0.1
DCLK1-201ENST00000255448 PTMAP06454 111 aaKnown RBP14.4□□□□□ -0.1
DCLK1-201ENST00000255448 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
DCLK1-201ENST00000255448 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
DCLK1-201ENST00000255448 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
DCLK1-201ENST00000255448 GOLGA6L22H0YM25 854 aa14.36□□□□□ -0.11
DCLK1-201ENST00000255448 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
DCLK1-201ENST00000255448 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
DCLK1-201ENST00000255448 SENP3-EIF4A1A0A087X0R7 540 aa14.34□□□□□ -0.11
DCLK1-201ENST00000255448 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
DCLK1-201ENST00000255448 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
DCLK1-201ENST00000255448 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
DCLK1-201ENST00000255448 ARID3AQ99856 593 aa14.31□□□□□ -0.12
DCLK1-201ENST00000255448 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
DCLK1-201ENST00000255448 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
DCLK1-201ENST00000255448 WDR43Q15061 677 aaKnown RBP eCLIP14.29□□□□□ -0.12
DCLK1-201ENST00000255448 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
DCLK1-201ENST00000255448 ANO8Q9HCE9 1232 aaPredicted RBP14.27□□□□□ -0.12
DCLK1-201ENST00000255448 TNIKQ9UKE5 1360 aa14.27□□□□□ -0.12
DCLK1-201ENST00000255448 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.12
DCLK1-201ENST00000255448 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.13
DCLK1-201ENST00000255448 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
DCLK1-201ENST00000255448 MSNP26038 577 aaKnown RBP14.26□□□□□ -0.13
DCLK1-201ENST00000255448 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
DCLK1-201ENST00000255448 RGS3P49796 1198 aa14.24□□□□□ -0.13
DCLK1-201ENST00000255448 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
DCLK1-201ENST00000255448 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
DCLK1-201ENST00000255448 PKNOX2Q96KN3 472 aa14.2□□□□□ -0.14
DCLK1-201ENST00000255448 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
DCLK1-201ENST00000255448 PLCB2Q00722 1185 aa14.18□□□□□ -0.14
DCLK1-201ENST00000255448 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
DCLK1-201ENST00000255448 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
DCLK1-201ENST00000255448 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
DCLK1-201ENST00000255448 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
DCLK1-201ENST00000255448 GZF1Q9H116 711 aaPredicted RBP14.15□□□□□ -0.14
DCLK1-201ENST00000255448 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
DCLK1-201ENST00000255448 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
DCLK1-201ENST00000255448 A0A0U1RQG5 324 aaPredicted RBP14.14□□□□□ -0.15
DCLK1-201ENST00000255448 ZBTB7CA1YPR0 619 aa14.14□□□□□ -0.15
DCLK1-201ENST00000255448 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
DCLK1-201ENST00000255448 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
DCLK1-201ENST00000255448 SPRYD3Q8NCJ5 442 aa14.12□□□□□ -0.15
DCLK1-201ENST00000255448 CUX2O14529 1486 aa14.12□□□□□ -0.15
DCLK1-201ENST00000255448 RGL3Q3MIN7 710 aa14.12□□□□□ -0.15
DCLK1-201ENST00000255448 TNNT3P45378 269 aaPredicted RBP14.12□□□□□ -0.15
DCLK1-201ENST00000255448 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
DCLK1-201ENST00000255448 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
DCLK1-201ENST00000255448 PODXL2Q9NZ53 605 aa14.1□□□□□ -0.15
DCLK1-201ENST00000255448 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
DCLK1-201ENST00000255448 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
DCLK1-201ENST00000255448 USP35Q9P2H5 1018 aa14.08□□□□□ -0.15
DCLK1-201ENST00000255448 GOLGA6L3A6NEY3 463 aa14.08□□□□□ -0.16
DCLK1-201ENST00000255448 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
DCLK1-201ENST00000255448 GSE1Q14687 1217 aa14.07□□□□□ -0.16
DCLK1-201ENST00000255448 SLKQ9H2G2 1235 aaPredicted RBP14.07□□□□□ -0.16
DCLK1-201ENST00000255448 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
DCLK1-201ENST00000255448 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
DCLK1-201ENST00000255448 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
DCLK1-201ENST00000255448 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
DCLK1-201ENST00000255448 CARMIL2Q6F5E8 1435 aa14.05□□□□□ -0.16
DCLK1-201ENST00000255448 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
DCLK1-201ENST00000255448 HSCBQ8IWL3 235 aa14.03□□□□□ -0.16
DCLK1-201ENST00000255448 KANK1Q14678 1352 aa14.03□□□□□ -0.16
DCLK1-201ENST00000255448 A0A0G2JS52 829 aa14.01□□□□□ -0.17
DCLK1-201ENST00000255448 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
DCLK1-201ENST00000255448 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
DCLK1-201ENST00000255448 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
DCLK1-201ENST00000255448 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
DCLK1-201ENST00000255448 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms