RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
PCDHGA3-201ENST00000253812 PTMAP06454 111 aaKnown RBP17.41■□□□□ 0.38
PCDHGA3-201ENST00000253812 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
PCDHGA3-201ENST00000253812 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
PCDHGA3-201ENST00000253812 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
PCDHGA3-201ENST00000253812 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
PCDHGA3-201ENST00000253812 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
PCDHGA3-201ENST00000253812 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
PCDHGA3-201ENST00000253812 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
PCDHGA3-201ENST00000253812 CLIP1P30622 1438 aa17.34■□□□□ 0.37
PCDHGA3-201ENST00000253812 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
PCDHGA3-201ENST00000253812 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA3-201ENST00000253812 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
PCDHGA3-201ENST00000253812 L1TD1Q5T7N2 865 aaKnown RBP17.3■□□□□ 0.36
PCDHGA3-201ENST00000253812 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
PCDHGA3-201ENST00000253812 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
PCDHGA3-201ENST00000253812 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.28■□□□□ 0.36
PCDHGA3-201ENST00000253812 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCDHGA3-201ENST00000253812 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
PCDHGA3-201ENST00000253812 EEA1Q15075 1411 aa17.27■□□□□ 0.35
PCDHGA3-201ENST00000253812 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
PCDHGA3-201ENST00000253812 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
PCDHGA3-201ENST00000253812 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
PCDHGA3-201ENST00000253812 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
PCDHGA3-201ENST00000253812 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
PCDHGA3-201ENST00000253812 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
PCDHGA3-201ENST00000253812 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
PCDHGA3-201ENST00000253812 MSNP26038 577 aaKnown RBP17.2■□□□□ 0.34
PCDHGA3-201ENST00000253812 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
PCDHGA3-201ENST00000253812 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
PCDHGA3-201ENST00000253812 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
PCDHGA3-201ENST00000253812 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHGA3-201ENST00000253812 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
PCDHGA3-201ENST00000253812 TNIKQ9UKE5 1360 aa17.13■□□□□ 0.33
PCDHGA3-201ENST00000253812 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA3-201ENST00000253812 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
PCDHGA3-201ENST00000253812 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
PCDHGA3-201ENST00000253812 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
PCDHGA3-201ENST00000253812 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
PCDHGA3-201ENST00000253812 HSP90AA2PQ14568 343 aaPredicted RBP17.1■□□□□ 0.33
PCDHGA3-201ENST00000253812 TSPY4P0CV99 314 aa17.09■□□□□ 0.33
PCDHGA3-201ENST00000253812 TSPY10P0CW01 314 aa17.09■□□□□ 0.33
PCDHGA3-201ENST00000253812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
PCDHGA3-201ENST00000253812 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
PCDHGA3-201ENST00000253812 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
PCDHGA3-201ENST00000253812 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
PCDHGA3-201ENST00000253812 SOGA1O94964 1423 aa17.08■□□□□ 0.33
PCDHGA3-201ENST00000253812 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
PCDHGA3-201ENST00000253812 NRDCO43847 1150 aa17.07■□□□□ 0.32
PCDHGA3-201ENST00000253812 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
PCDHGA3-201ENST00000253812 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
PCDHGA3-201ENST00000253812 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
PCDHGA3-201ENST00000253812 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
PCDHGA3-201ENST00000253812 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
PCDHGA3-201ENST00000253812 GOLGA6L6A8MZA4 724 aa17.02■□□□□ 0.32
PCDHGA3-201ENST00000253812 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
PCDHGA3-201ENST00000253812 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
PCDHGA3-201ENST00000253812 CUX2O14529 1486 aa16.98■□□□□ 0.31
PCDHGA3-201ENST00000253812 HIRIP3Q9BW71 556 aaPredicted RBP16.98■□□□□ 0.31
PCDHGA3-201ENST00000253812 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
PCDHGA3-201ENST00000253812 RGS3P49796 1198 aa16.98■□□□□ 0.31
PCDHGA3-201ENST00000253812 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
PCDHGA3-201ENST00000253812 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
PCDHGA3-201ENST00000253812 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.3
PCDHGA3-201ENST00000253812 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.3
PCDHGA3-201ENST00000253812 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
PCDHGA3-201ENST00000253812 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
PCDHGA3-201ENST00000253812 WIZO95785 1651 aa16.95■□□□□ 0.3
PCDHGA3-201ENST00000253812 KIAA2012Q0VF49 1180 aa16.94■□□□□ 0.3
PCDHGA3-201ENST00000253812 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
PCDHGA3-201ENST00000253812 ARID3AQ99856 593 aa16.93■□□□□ 0.3
PCDHGA3-201ENST00000253812 HSCBQ8IWL3 235 aa16.92■□□□□ 0.3
PCDHGA3-201ENST00000253812 PTMSP20962 102 aa16.91■□□□□ 0.3
PCDHGA3-201ENST00000253812 IPO9Q96P70 1041 aaKnown RBP16.9■□□□□ 0.3
PCDHGA3-201ENST00000253812 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
PCDHGA3-201ENST00000253812 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
PCDHGA3-201ENST00000253812 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
PCDHGA3-201ENST00000253812 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
PCDHGA3-201ENST00000253812 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
PCDHGA3-201ENST00000253812 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
PCDHGA3-201ENST00000253812 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
PCDHGA3-201ENST00000253812 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.28
PCDHGA3-201ENST00000253812 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
PCDHGA3-201ENST00000253812 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
PCDHGA3-201ENST00000253812 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
PCDHGA3-201ENST00000253812 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
PCDHGA3-201ENST00000253812 PKNOX2Q96KN3 472 aa16.81■□□□□ 0.28
PCDHGA3-201ENST00000253812 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
PCDHGA3-201ENST00000253812 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
PCDHGA3-201ENST00000253812 DRC7Q8IY82 874 aa16.8■□□□□ 0.28
PCDHGA3-201ENST00000253812 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
PCDHGA3-201ENST00000253812 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
PCDHGA3-201ENST00000253812 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
PCDHGA3-201ENST00000253812 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
PCDHGA3-201ENST00000253812 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
PCDHGA3-201ENST00000253812 SENP3Q9H4L4 574 aaPredicted RBP16.76■□□□□ 0.27
PCDHGA3-201ENST00000253812 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
PCDHGA3-201ENST00000253812 MS4A1P11836 297 aa16.75■□□□□ 0.27
PCDHGA3-201ENST00000253812 GSE1Q14687 1217 aa16.75■□□□□ 0.27
PCDHGA3-201ENST00000253812 SIN3AQ96ST3 1273 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms