RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
ZKSCAN3-201ENST00000252211 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
ZKSCAN3-201ENST00000252211 PPP1R15AO75807 674 aaPredicted RBP16.75■□□□□ 0.27
ZKSCAN3-201ENST00000252211 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
ZKSCAN3-201ENST00000252211 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
ZKSCAN3-201ENST00000252211 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
ZKSCAN3-201ENST00000252211 FHAD1B1AJZ9 1412 aa16.72■□□□□ 0.27
ZKSCAN3-201ENST00000252211 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
ZKSCAN3-201ENST00000252211 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
ZKSCAN3-201ENST00000252211 CARMIL2Q6F5E8 1435 aa16.69■□□□□ 0.26
ZKSCAN3-201ENST00000252211 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
ZKSCAN3-201ENST00000252211 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
ZKSCAN3-201ENST00000252211 WIZO95785 1651 aa16.62■□□□□ 0.25
ZKSCAN3-201ENST00000252211 C14orf37Q86TY3 774 aa16.62■□□□□ 0.25
ZKSCAN3-201ENST00000252211 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
ZKSCAN3-201ENST00000252211 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
ZKSCAN3-201ENST00000252211 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
ZKSCAN3-201ENST00000252211 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
ZKSCAN3-201ENST00000252211 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
ZKSCAN3-201ENST00000252211 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.249e-7■■■■□ 21.9
ZKSCAN3-201ENST00000252211 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
ZKSCAN3-201ENST00000252211 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
ZKSCAN3-201ENST00000252211 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
ZKSCAN3-201ENST00000252211 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
ZKSCAN3-201ENST00000252211 MLECQ14165 292 aa16.5■□□□□ 0.23
ZKSCAN3-201ENST00000252211 FMN1Q68DA7 1419 aa16.49■□□□□ 0.23
ZKSCAN3-201ENST00000252211 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
ZKSCAN3-201ENST00000252211 KANK1Q14678 1352 aa16.48■□□□□ 0.23
ZKSCAN3-201ENST00000252211 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
ZKSCAN3-201ENST00000252211 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
ZKSCAN3-201ENST00000252211 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
ZKSCAN3-201ENST00000252211 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
ZKSCAN3-201ENST00000252211 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
ZKSCAN3-201ENST00000252211 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
ZKSCAN3-201ENST00000252211 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
ZKSCAN3-201ENST00000252211 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
ZKSCAN3-201ENST00000252211 GGT6Q6P531 493 aa16.43■□□□□ 0.22
ZKSCAN3-201ENST00000252211 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
ZKSCAN3-201ENST00000252211 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
ZKSCAN3-201ENST00000252211 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
ZKSCAN3-201ENST00000252211 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
ZKSCAN3-201ENST00000252211 CARD11Q9BXL7 1154 aa16.41■□□□□ 0.22
ZKSCAN3-201ENST00000252211 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
ZKSCAN3-201ENST00000252211 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
ZKSCAN3-201ENST00000252211 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
ZKSCAN3-201ENST00000252211 POGKQ9P215 609 aa16.41■□□□□ 0.22
ZKSCAN3-201ENST00000252211 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
ZKSCAN3-201ENST00000252211 A0A0G2JS52 829 aa16.38■□□□□ 0.21
ZKSCAN3-201ENST00000252211 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
ZKSCAN3-201ENST00000252211 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
ZKSCAN3-201ENST00000252211 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
ZKSCAN3-201ENST00000252211 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
ZKSCAN3-201ENST00000252211 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
ZKSCAN3-201ENST00000252211 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
ZKSCAN3-201ENST00000252211 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
ZKSCAN3-201ENST00000252211 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
ZKSCAN3-201ENST00000252211 PTPRGP23470 1445 aa16.31■□□□□ 0.2
ZKSCAN3-201ENST00000252211 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
ZKSCAN3-201ENST00000252211 RTL5Q5HYW3 569 aaPredicted RBP16.3■□□□□ 0.2
ZKSCAN3-201ENST00000252211 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
ZKSCAN3-201ENST00000252211 DCAF11Q8TEB1 546 aa16.3■□□□□ 0.2
ZKSCAN3-201ENST00000252211 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
ZKSCAN3-201ENST00000252211 ANKRD30AQ9BXX3 1397 aa16.27■□□□□ 0.2
ZKSCAN3-201ENST00000252211 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.2
ZKSCAN3-201ENST00000252211 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
ZKSCAN3-201ENST00000252211 PKD2Q13563 968 aa16.27■□□□□ 0.19
ZKSCAN3-201ENST00000252211 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.19
ZKSCAN3-201ENST00000252211 KIF3BO15066 747 aa16.26■□□□□ 0.19
ZKSCAN3-201ENST00000252211 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
ZKSCAN3-201ENST00000252211 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
ZKSCAN3-201ENST00000252211 HNRNPMP52272 730 aaKnown RBP eCLIP16.24■□□□□ 0.19
ZKSCAN3-201ENST00000252211 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
ZKSCAN3-201ENST00000252211 NUP155O75694 1391 aa16.23■□□□□ 0.19
ZKSCAN3-201ENST00000252211 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
ZKSCAN3-201ENST00000252211 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
ZKSCAN3-201ENST00000252211 IGF1RP08069 1367 aa16.2■□□□□ 0.18
ZKSCAN3-201ENST00000252211 TMF1P82094 1093 aa16.19■□□□□ 0.18
ZKSCAN3-201ENST00000252211 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
ZKSCAN3-201ENST00000252211 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
ZKSCAN3-201ENST00000252211 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
ZKSCAN3-201ENST00000252211 FKBP8Q14318 412 aa16.17■□□□□ 0.18
ZKSCAN3-201ENST00000252211 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
ZKSCAN3-201ENST00000252211 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
ZKSCAN3-201ENST00000252211 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
ZKSCAN3-201ENST00000252211 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
ZKSCAN3-201ENST00000252211 MIER1Q8N108 512 aa16.14■□□□□ 0.17
ZKSCAN3-201ENST00000252211 STK26Q9P289 416 aa16.14■□□□□ 0.17
ZKSCAN3-201ENST00000252211 FOXD1Q16676 465 aa16.13■□□□□ 0.17
ZKSCAN3-201ENST00000252211 CFTRP13569 1480 aa16.13■□□□□ 0.17
ZKSCAN3-201ENST00000252211 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
ZKSCAN3-201ENST00000252211 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
ZKSCAN3-201ENST00000252211 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
ZKSCAN3-201ENST00000252211 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
ZKSCAN3-201ENST00000252211 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
ZKSCAN3-201ENST00000252211 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
ZKSCAN3-201ENST00000252211 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
ZKSCAN3-201ENST00000252211 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
ZKSCAN3-201ENST00000252211 NESP48681 1621 aa16.09■□□□□ 0.17
ZKSCAN3-201ENST00000252211 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
ZKSCAN3-201ENST00000252211 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms