RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 CUL7Q14999 1698 aa29.03■■■□□ 2.24
FXR2-201ENST00000250113 CCNB3Q8WWL7 1395 aa29.02■■■□□ 2.24
FXR2-201ENST00000250113 RRBP1Q9P2E9 1410 aaKnown RBP29.01■■■□□ 2.23
FXR2-201ENST00000250113 TIAM1Q13009 1591 aa29■■■□□ 2.23
FXR2-201ENST00000250113 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
FXR2-201ENST00000250113 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
FXR2-201ENST00000250113 NEUROD1Q13562 356 aa28.99■■■□□ 2.23
FXR2-201ENST00000250113 AQRO60306 1485 aaKnown RBP eCLIP28.98■■■□□ 2.231e-8■■■■■ 34.1
FXR2-201ENST00000250113 PCF11O94913 1555 aaKnown RBP28.96■■■□□ 2.23
FXR2-201ENST00000250113 LRRC9Q6ZRR7 1453 aa28.94■■■□□ 2.22
FXR2-201ENST00000250113 FAM50AQ14320 339 aaKnown RBP28.92■■■□□ 2.22
FXR2-201ENST00000250113 PHLDB1Q86UU1 1377 aa28.92■■■□□ 2.22
FXR2-201ENST00000250113 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
FXR2-201ENST00000250113 YTHDC1Q96MU7 727 aaKnown RBP28.89■■■□□ 2.22
FXR2-201ENST00000250113 CTTNBP2Q8WZ74 1663 aa28.89■■■□□ 2.22
FXR2-201ENST00000250113 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
FXR2-201ENST00000250113 DHX57Q6P158 1386 aaKnown RBP28.86■■■□□ 2.21
FXR2-201ENST00000250113 ZNF316A6NFI3 1004 aaPredicted RBP28.84■■■□□ 2.21
FXR2-201ENST00000250113 EFCAB5A4FU69 1503 aa28.84■■■□□ 2.21
FXR2-201ENST00000250113 MAP3K1Q13233 1512 aa28.84■■■□□ 2.21
FXR2-201ENST00000250113 CASKIN1Q8WXD9 1431 aa28.81■■■□□ 2.2
FXR2-201ENST00000250113 ACIN1Q9UKV3 1341 aaKnown RBP28.79■■■□□ 2.2
FXR2-201ENST00000250113 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
FXR2-201ENST00000250113 FYCO1Q9BQS8 1478 aa28.78■■■□□ 2.2
FXR2-201ENST00000250113 FMN1Q68DA7 1419 aa28.77■■■□□ 2.2
FXR2-201ENST00000250113 ARID3CA6NKF2 412 aa28.72■■■□□ 2.19
FXR2-201ENST00000250113 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
FXR2-201ENST00000250113 ERCC6Q03468 1493 aa28.71■■■□□ 2.19
FXR2-201ENST00000250113 RAB3GAP2Q9H2M9 1393 aa28.7■■■□□ 2.19
FXR2-201ENST00000250113 SNAPC4Q5SXM2 1469 aa28.69■■■□□ 2.18
FXR2-201ENST00000250113 PBRM1Q86U86 1689 aa28.69■■■□□ 2.18
FXR2-201ENST00000250113 GTF3C3Q9Y5Q9 886 aa28.68■■■□□ 2.18
FXR2-201ENST00000250113 MTUS2Q5JR59 1369 aa28.68■■■□□ 2.18
FXR2-201ENST00000250113 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
FXR2-201ENST00000250113 SAMD9Q5K651 1589 aa28.65■■■□□ 2.18
FXR2-201ENST00000250113 MIER1Q8N108 512 aa28.62■■■□□ 2.17
FXR2-201ENST00000250113 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
FXR2-201ENST00000250113 CLSPNQ9HAW4 1339 aa28.61■■■□□ 2.17
FXR2-201ENST00000250113 ADAMTS12P58397 1594 aa28.59■■■□□ 2.17
FXR2-201ENST00000250113 WDR62O43379 1518 aa28.59■■■□□ 2.17
FXR2-201ENST00000250113 SETD5Q9C0A6 1442 aa28.58■■■□□ 2.16
FXR2-201ENST00000250113 FBLN2P98095 1184 aa28.57■■■□□ 2.16
FXR2-201ENST00000250113 IQGAP2Q13576 1575 aa28.53■■■□□ 2.16
FXR2-201ENST00000250113 LRRIQ1Q96JM4 1722 aa28.53■■■□□ 2.16
FXR2-201ENST00000250113 CENPBP07199 599 aaPredicted RBP28.5■■■□□ 2.15
FXR2-201ENST00000250113 FGD6Q6ZV73 1430 aa28.49■■■□□ 2.15
FXR2-201ENST00000250113 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
FXR2-201ENST00000250113 NCOA2Q15596 1464 aa28.46■■■□□ 2.15
FXR2-201ENST00000250113 SIN3AQ96ST3 1273 aa28.45■■■□□ 2.15
FXR2-201ENST00000250113 EIF4G3O43432 1585 aaKnown RBP28.44■■■□□ 2.14
FXR2-201ENST00000250113 MAGI3Q5TCQ9 1506 aa28.41■■■□□ 2.14
FXR2-201ENST00000250113 MAPKBP1O60336 1514 aa28.4■■■□□ 2.14
FXR2-201ENST00000250113 PTPRKQ15262 1439 aa28.38■■■□□ 2.13
FXR2-201ENST00000250113 CDK13Q14004 1512 aaKnown RBP28.38■■■□□ 2.13
FXR2-201ENST00000250113 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
FXR2-201ENST00000250113 MYOM3Q5VTT5 1437 aa28.36■■■□□ 2.13
FXR2-201ENST00000250113 CHIC2Q9UKJ5 165 aa28.35■■■□□ 2.13
FXR2-201ENST00000250113 THOC2Q8NI27 1593 aaKnown RBP28.35■■■□□ 2.13
FXR2-201ENST00000250113 KIAA0586Q9BVV6 1533 aa28.34■■■□□ 2.13
FXR2-201ENST00000250113 EPRSP07814 1512 aaKnown RBP28.34■■■□□ 2.13
FXR2-201ENST00000250113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.33■■■□□ 2.13
FXR2-201ENST00000250113 EHBP1L1Q8N3D4 1523 aa28.31■■■□□ 2.12
FXR2-201ENST00000250113 UGGT2Q9NYU1 1516 aa28.31■■■□□ 2.12
FXR2-201ENST00000250113 SUPT6HQ7KZ85 1726 aaKnown RBP28.3■■■□□ 2.12
FXR2-201ENST00000250113 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
FXR2-201ENST00000250113 DISP1Q96F81 1524 aa28.29■■■□□ 2.12
FXR2-201ENST00000250113 HECW1Q76N89 1606 aa28.29■■■□□ 2.12
FXR2-201ENST00000250113 RRP7BPQ9NSQ0 103 aa28.28■■■□□ 2.12
FXR2-201ENST00000250113 KIAA0556O60303 1618 aa28.21■■■□□ 2.11
FXR2-201ENST00000250113 MAGI1Q96QZ7 1491 aaPredicted RBP28.21■■■□□ 2.11
FXR2-201ENST00000250113 SYNJ2O15056 1496 aa28.2■■■□□ 2.11
FXR2-201ENST00000250113 PTPN23Q9H3S7 1636 aa28.19■■■□□ 2.1
FXR2-201ENST00000250113 JPH4Q96JJ6 628 aa28.19■■■□□ 2.1
FXR2-201ENST00000250113 CEP170Q5SW79 1584 aa28.18■■■□□ 2.1
FXR2-201ENST00000250113 ARHGEF11O15085 1522 aa28.16■■■□□ 2.1
FXR2-201ENST00000250113 HFM1A2PYH4 1435 aa28.16■■■□□ 2.1
FXR2-201ENST00000250113 NAIPQ13075 1403 aa28.15■■■□□ 2.1
FXR2-201ENST00000250113 NUP153P49790 1475 aaKnown RBP28.14■■■□□ 2.1
FXR2-201ENST00000250113 ZNF644Q9H582 1327 aaPredicted RBP28.13■■■□□ 2.09
FXR2-201ENST00000250113 PLB1Q6P1J6 1458 aa28.11■■■□□ 2.09
FXR2-201ENST00000250113 HIRIP3Q9BW71 556 aaPredicted RBP28.09■■■□□ 2.09
FXR2-201ENST00000250113 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
FXR2-201ENST00000250113 CDK11AQ9UQ88 783 aaPredicted RBP28.07■■■□□ 2.08
FXR2-201ENST00000250113 RAPGEF6Q8TEU7 1601 aa28.05■■■□□ 2.08
FXR2-201ENST00000250113 PRG4Q92954 1404 aaPredicted RBP28.05■■■□□ 2.08
FXR2-201ENST00000250113 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
FXR2-201ENST00000250113 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.08
FXR2-201ENST00000250113 NUP160Q12769 1436 aa28.01■■■□□ 2.07
FXR2-201ENST00000250113 ZNF777Q9ULD5 760 aaPredicted RBP28.01■■■□□ 2.07
FXR2-201ENST00000250113 CARMIL2Q6F5E8 1435 aa28■■■□□ 2.07
FXR2-201ENST00000250113 PPP1R15AO75807 674 aaPredicted RBP28■■■□□ 2.07
FXR2-201ENST00000250113 MIA2Q96PC5 1412 aa27.98■■■□□ 2.07
FXR2-201ENST00000250113 TONSLQ96HA7 1378 aa27.97■■■□□ 2.07
FXR2-201ENST00000250113 KCNH8Q96L42 1107 aa27.97■■■□□ 2.07
FXR2-201ENST00000250113 FOXD1Q16676 465 aa27.95■■■□□ 2.07
FXR2-201ENST00000250113 CFDP1Q9UEE9 299 aaPredicted RBP27.94■■■□□ 2.06
FXR2-201ENST00000250113 KDM6BO15054 1643 aa27.93■■■□□ 2.06
FXR2-201ENST00000250113 TIMELESSQ9UNS1 1208 aa27.92■■■□□ 2.06
FXR2-201ENST00000250113 PELP1Q8IZL8 1130 aaKnown RBP27.91■■■□□ 2.06
FXR2-201ENST00000250113 DDX10Q13206 875 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms