RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
MBD4-201ENST00000249910 CUL7Q14999 1698 aa22.16■■□□□ 1.14
MBD4-201ENST00000249910 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
MBD4-201ENST00000249910 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
MBD4-201ENST00000249910 ITGAEP38570 1179 aa22.12■■□□□ 1.13
MBD4-201ENST00000249910 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
MBD4-201ENST00000249910 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
MBD4-201ENST00000249910 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
MBD4-201ENST00000249910 TIAM1Q13009 1591 aa22.04■■□□□ 1.12
MBD4-201ENST00000249910 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
MBD4-201ENST00000249910 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
MBD4-201ENST00000249910 PCF11O94913 1555 aaKnown RBP22.02■■□□□ 1.12
MBD4-201ENST00000249910 LRRC9Q6ZRR7 1453 aa22.01■■□□□ 1.11
MBD4-201ENST00000249910 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
MBD4-201ENST00000249910 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
MBD4-201ENST00000249910 EFCAB5A4FU69 1503 aa21.98■■□□□ 1.11
MBD4-201ENST00000249910 WDR62O43379 1518 aa21.96■■□□□ 1.11
MBD4-201ENST00000249910 CASKIN1Q8WXD9 1431 aa21.94■■□□□ 1.1
MBD4-201ENST00000249910 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
MBD4-201ENST00000249910 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
MBD4-201ENST00000249910 MAP3K1Q13233 1512 aa21.94■■□□□ 1.1
MBD4-201ENST00000249910 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
MBD4-201ENST00000249910 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
MBD4-201ENST00000249910 FYCO1Q9BQS8 1478 aa21.91■■□□□ 1.1
MBD4-201ENST00000249910 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
MBD4-201ENST00000249910 ARID3CA6NKF2 412 aa21.87■■□□□ 1.09
MBD4-201ENST00000249910 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
MBD4-201ENST00000249910 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
MBD4-201ENST00000249910 FBLN2P98095 1184 aa21.86■■□□□ 1.09
MBD4-201ENST00000249910 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
MBD4-201ENST00000249910 DHX57Q6P158 1386 aaKnown RBP21.85■■□□□ 1.09
MBD4-201ENST00000249910 MTUS2Q5JR59 1369 aa21.83■■□□□ 1.08
MBD4-201ENST00000249910 CFAP43Q8NDM7 1665 aa21.81■■□□□ 1.08
MBD4-201ENST00000249910 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
MBD4-201ENST00000249910 IQGAP2Q13576 1575 aa21.79■■□□□ 1.08
MBD4-201ENST00000249910 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
MBD4-201ENST00000249910 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
MBD4-201ENST00000249910 RAB3GAP2Q9H2M9 1393 aa21.76■■□□□ 1.07
MBD4-201ENST00000249910 DIEXFQ68CQ4 756 aaKnown RBP21.74■■□□□ 1.07
MBD4-201ENST00000249910 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
MBD4-201ENST00000249910 LRRIQ1Q96JM4 1722 aa21.7■■□□□ 1.06
MBD4-201ENST00000249910 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
MBD4-201ENST00000249910 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
MBD4-201ENST00000249910 FGD6Q6ZV73 1430 aa21.66■■□□□ 1.06
MBD4-201ENST00000249910 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
MBD4-201ENST00000249910 CLSPNQ9HAW4 1339 aa21.66■■□□□ 1.06
MBD4-201ENST00000249910 NCOA2Q15596 1464 aa21.66■■□□□ 1.06
MBD4-201ENST00000249910 MAGI3Q5TCQ9 1506 aa21.64■■□□□ 1.06
MBD4-201ENST00000249910 UGGT2Q9NYU1 1516 aa21.64■■□□□ 1.05
MBD4-201ENST00000249910 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
MBD4-201ENST00000249910 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
MBD4-201ENST00000249910 CDK13Q14004 1512 aaKnown RBP21.63■■□□□ 1.05
MBD4-201ENST00000249910 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
MBD4-201ENST00000249910 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
MBD4-201ENST00000249910 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
MBD4-201ENST00000249910 PTPRKQ15262 1439 aa21.58■■□□□ 1.05
MBD4-201ENST00000249910 MYOM3Q5VTT5 1437 aa21.58■■□□□ 1.05
MBD4-201ENST00000249910 CEP170Q5SW79 1584 aa21.56■■□□□ 1.04
MBD4-201ENST00000249910 CCDC18Q5T9S5 1454 aa21.56■■□□□ 1.04
MBD4-201ENST00000249910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.56■■□□□ 1.04
MBD4-201ENST00000249910 KIAA0556O60303 1618 aa21.55■■□□□ 1.04
MBD4-201ENST00000249910 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
MBD4-201ENST00000249910 EHBP1L1Q8N3D4 1523 aa21.54■■□□□ 1.04
MBD4-201ENST00000249910 SIN3AQ96ST3 1273 aa21.54■■□□□ 1.04
MBD4-201ENST00000249910 CHIC2Q9UKJ5 165 aa21.54■■□□□ 1.04
MBD4-201ENST00000249910 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
MBD4-201ENST00000249910 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
MBD4-201ENST00000249910 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
MBD4-201ENST00000249910 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
MBD4-201ENST00000249910 PLB1Q6P1J6 1458 aa21.49■■□□□ 1.03
MBD4-201ENST00000249910 NUP160Q12769 1436 aa21.48■■□□□ 1.03
MBD4-201ENST00000249910 RRP7BPQ9NSQ0 103 aa21.48■■□□□ 1.03
MBD4-201ENST00000249910 ARHGEF11O15085 1522 aa21.47■■□□□ 1.03
MBD4-201ENST00000249910 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
MBD4-201ENST00000249910 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
MBD4-201ENST00000249910 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
MBD4-201ENST00000249910 CARMIL2Q6F5E8 1435 aa21.41■■□□□ 1.02
MBD4-201ENST00000249910 HFM1A2PYH4 1435 aa21.41■■□□□ 1.02
MBD4-201ENST00000249910 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
MBD4-201ENST00000249910 NAIPQ13075 1403 aa21.4■■□□□ 1.02
MBD4-201ENST00000249910 RAPGEF6Q8TEU7 1601 aa21.39■■□□□ 1.02
MBD4-201ENST00000249910 MIER1Q8N108 512 aa21.37■■□□□ 1.01
MBD4-201ENST00000249910 MIA2Q96PC5 1412 aa21.33■■□□□ 1
MBD4-201ENST00000249910 TCOF1Q13428 1488 aaKnown RBP21.33■■□□□ 1
MBD4-201ENST00000249910 ZNF777Q9ULD5 760 aaPredicted RBP21.32■■□□□ 1
MBD4-201ENST00000249910 TRIM52Q96A61 297 aa21.3■■□□□ 1
MBD4-201ENST00000249910 CFDP1Q9UEE9 299 aaPredicted RBP21.3■■□□□ 1
MBD4-201ENST00000249910 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
MBD4-201ENST00000249910 UACAQ9BZF9 1416 aa21.29■■□□□ 1
MBD4-201ENST00000249910 PLEKHD1A6NEE1 506 aa21.27■■□□□ 1
MBD4-201ENST00000249910 PTPRGP23470 1445 aa21.25■□□□□ 0.99
MBD4-201ENST00000249910 YTHDC1Q96MU7 727 aaKnown RBP21.24■□□□□ 0.99
MBD4-201ENST00000249910 ATP10BO94823 1461 aa21.23■□□□□ 0.99
MBD4-201ENST00000249910 ABCC5O15440 1437 aa21.22■□□□□ 0.99
MBD4-201ENST00000249910 FOXD1Q16676 465 aa21.21■□□□□ 0.99
MBD4-201ENST00000249910 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
MBD4-201ENST00000249910 DAPK1P53355 1430 aa21.21■□□□□ 0.99
MBD4-201ENST00000249910 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
MBD4-201ENST00000249910 KDM6BO15054 1643 aa21.2■□□□□ 0.98
MBD4-201ENST00000249910 KIF14Q15058 1648 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms