RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
APOBEC3A-201ENST00000249116 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
APOBEC3A-201ENST00000249116 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
APOBEC3A-201ENST00000249116 FOXD1Q16676 465 aa22.52■■□□□ 1.2
APOBEC3A-201ENST00000249116 RUSC2Q8N2Y8 1516 aa22.5■■□□□ 1.19
APOBEC3A-201ENST00000249116 IGF1RP08069 1367 aa22.48■■□□□ 1.19
APOBEC3A-201ENST00000249116 CUL7Q14999 1698 aa22.45■■□□□ 1.19
APOBEC3A-201ENST00000249116 KIAA0586Q9BVV6 1533 aa22.43■■□□□ 1.18
APOBEC3A-201ENST00000249116 NPM1P06748 294 aaKnown RBP eCLIP22.39■■□□□ 1.17
APOBEC3A-201ENST00000249116 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
APOBEC3A-201ENST00000249116 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
APOBEC3A-201ENST00000249116 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
APOBEC3A-201ENST00000249116 ADCY10Q96PN6 1610 aa22.26■■□□□ 1.15
APOBEC3A-201ENST00000249116 FAM69CQ0P6D2 419 aa22.25■■□□□ 1.15
APOBEC3A-201ENST00000249116 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
APOBEC3A-201ENST00000249116 CARMIL2Q6F5E8 1435 aa22.24■■□□□ 1.15
APOBEC3A-201ENST00000249116 PTPRGP23470 1445 aa22.23■■□□□ 1.15
APOBEC3A-201ENST00000249116 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
APOBEC3A-201ENST00000249116 IQGAP2Q13576 1575 aa22.19■■□□□ 1.14
APOBEC3A-201ENST00000249116 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
APOBEC3A-201ENST00000249116 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
APOBEC3A-201ENST00000249116 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
APOBEC3A-201ENST00000249116 ABCC2Q92887 1545 aa22.1■■□□□ 1.13
APOBEC3A-201ENST00000249116 DISP1Q96F81 1524 aa22.08■■□□□ 1.12
APOBEC3A-201ENST00000249116 UHRF1BP1LA0JNW5 1464 aa22.06■■□□□ 1.12
APOBEC3A-201ENST00000249116 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
APOBEC3A-201ENST00000249116 UGGT2Q9NYU1 1516 aa22.05■■□□□ 1.12
APOBEC3A-201ENST00000249116 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
APOBEC3A-201ENST00000249116 ASXL2Q76L83 1435 aa22.02■■□□□ 1.11
APOBEC3A-201ENST00000249116 KDM6BO15054 1643 aa22■■□□□ 1.11
APOBEC3A-201ENST00000249116 KIAA0556O60303 1618 aa21.99■■□□□ 1.11
APOBEC3A-201ENST00000249116 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
APOBEC3A-201ENST00000249116 KDM5BQ9UGL1 1544 aa21.95■■□□□ 1.1
APOBEC3A-201ENST00000249116 GLI2P10070 1586 aa21.95■■□□□ 1.1
APOBEC3A-201ENST00000249116 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
APOBEC3A-201ENST00000249116 GOLGA3Q08378 1498 aa21.92■■□□□ 1.1
APOBEC3A-201ENST00000249116 PRXQ9BXM0 1461 aa21.91■■□□□ 1.1
APOBEC3A-201ENST00000249116 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
APOBEC3A-201ENST00000249116 EPRSP07814 1512 aaKnown RBP21.87■■□□□ 1.09
APOBEC3A-201ENST00000249116 PPRC1Q5VV67 1664 aaKnown RBP21.83■■□□□ 1.08
APOBEC3A-201ENST00000249116 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
APOBEC3A-201ENST00000249116 TEX14Q8IWB6 1497 aa21.81■■□□□ 1.08
APOBEC3A-201ENST00000249116 MAP3K4Q9Y6R4 1608 aa21.8■■□□□ 1.08
APOBEC3A-201ENST00000249116 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
APOBEC3A-201ENST00000249116 ABCA8O94911 1581 aa21.78■■□□□ 1.08
APOBEC3A-201ENST00000249116 CSRNP3Q8WYN3 585 aa21.78■■□□□ 1.08
APOBEC3A-201ENST00000249116 KDM4FA0A1W2PPD8 638 aa21.76■■□□□ 1.07
APOBEC3A-201ENST00000249116 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
APOBEC3A-201ENST00000249116 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
APOBEC3A-201ENST00000249116 EEA1Q15075 1411 aa21.7■■□□□ 1.06
APOBEC3A-201ENST00000249116 COL17A1Q9UMD9 1497 aaPredicted RBP21.7■■□□□ 1.06
APOBEC3A-201ENST00000249116 CD109Q6YHK3 1445 aa21.69■■□□□ 1.06
APOBEC3A-201ENST00000249116 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
APOBEC3A-201ENST00000249116 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
APOBEC3A-201ENST00000249116 MAGI3Q5TCQ9 1506 aa21.66■■□□□ 1.06
APOBEC3A-201ENST00000249116 SAMD9Q5K651 1589 aa21.63■■□□□ 1.05
APOBEC3A-201ENST00000249116 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
APOBEC3A-201ENST00000249116 ATP10BO94823 1461 aa21.61■■□□□ 1.05
APOBEC3A-201ENST00000249116 ADGRL1O94910 1474 aa21.6■■□□□ 1.05
APOBEC3A-201ENST00000249116 RAPGEF6Q8TEU7 1601 aa21.56■■□□□ 1.04
APOBEC3A-201ENST00000249116 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
APOBEC3A-201ENST00000249116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
APOBEC3A-201ENST00000249116 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
APOBEC3A-201ENST00000249116 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
APOBEC3A-201ENST00000249116 ABCA9Q8IUA7 1624 aa21.49■■□□□ 1.03
APOBEC3A-201ENST00000249116 PHLDB1Q86UU1 1377 aa21.49■■□□□ 1.03
APOBEC3A-201ENST00000249116 ARAP3Q8WWN8 1544 aa21.48■■□□□ 1.03
APOBEC3A-201ENST00000249116 KIF21BO75037 1637 aa21.48■■□□□ 1.03
APOBEC3A-201ENST00000249116 NUP153P49790 1475 aaKnown RBP21.48■■□□□ 1.03
APOBEC3A-201ENST00000249116 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
APOBEC3A-201ENST00000249116 PLEKHD1A6NEE1 506 aa21.43■■□□□ 1.02
APOBEC3A-201ENST00000249116 NEO1Q92859 1461 aa21.42■■□□□ 1.02
APOBEC3A-201ENST00000249116 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
APOBEC3A-201ENST00000249116 RAPGEF3O95398 923 aa21.35■■□□□ 1.01
APOBEC3A-201ENST00000249116 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
APOBEC3A-201ENST00000249116 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
APOBEC3A-201ENST00000249116 FMN1Q68DA7 1419 aa21.29■■□□□ 1
APOBEC3A-201ENST00000249116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.27■■□□□ 1
APOBEC3A-201ENST00000249116 AKNAQ7Z591 1439 aa21.27■■□□□ 1
APOBEC3A-201ENST00000249116 FANCAO15360 1455 aa21.27■■□□□ 1
APOBEC3A-201ENST00000249116 DENND4BO75064 1496 aaPredicted RBP21.27■■□□□ 1
APOBEC3A-201ENST00000249116 CFAP74Q9C0B2 1584 aa21.27■□□□□ 0.99
APOBEC3A-201ENST00000249116 CDK13Q14004 1512 aaKnown RBP21.26■□□□□ 0.99
APOBEC3A-201ENST00000249116 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
APOBEC3A-201ENST00000249116 FRMPD1Q5SYB0 1578 aa21.26■□□□□ 0.99
APOBEC3A-201ENST00000249116 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
APOBEC3A-201ENST00000249116 ARID4BQ4LE39 1312 aaPredicted RBP21.23■□□□□ 0.99
APOBEC3A-201ENST00000249116 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
APOBEC3A-201ENST00000249116 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
APOBEC3A-201ENST00000249116 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
APOBEC3A-201ENST00000249116 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
APOBEC3A-201ENST00000249116 RICTORQ6R327 1708 aa21.18■□□□□ 0.98
APOBEC3A-201ENST00000249116 ARHGEF40Q8TER5 1519 aa21.18■□□□□ 0.98
APOBEC3A-201ENST00000249116 PTPRMP28827 1452 aa21.18■□□□□ 0.98
APOBEC3A-201ENST00000249116 PLCH2O75038 1416 aa21.17■□□□□ 0.98
APOBEC3A-201ENST00000249116 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
APOBEC3A-201ENST00000249116 MSH5O43196 834 aa21.14■□□□□ 0.98
APOBEC3A-201ENST00000249116 ZMYM4Q5VZL5 1548 aa21.14■□□□□ 0.97
APOBEC3A-201ENST00000249116 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
APOBEC3A-201ENST00000249116 MAGI2Q86UL8 1455 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms