RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 SMARCA4P51532 1647 aa13.84□□□□□ -0.19
SIX1-201ENST00000247182 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
SIX1-201ENST00000247182 SALL2Q9Y467 1007 aaPredicted RBP13.82□□□□□ -0.2
SIX1-201ENST00000247182 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
SIX1-201ENST00000247182 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
SIX1-201ENST00000247182 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
SIX1-201ENST00000247182 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
SIX1-201ENST00000247182 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
SIX1-201ENST00000247182 DHX57Q6P158 1386 aaKnown RBP13.74□□□□□ -0.21
SIX1-201ENST00000247182 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
SIX1-201ENST00000247182 LAS1LQ9Y4W2 734 aaKnown RBP13.72□□□□□ -0.21
SIX1-201ENST00000247182 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
SIX1-201ENST00000247182 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
SIX1-201ENST00000247182 MSH5O43196 834 aa13.7□□□□□ -0.22
SIX1-201ENST00000247182 CCNB3Q8WWL7 1395 aa13.68□□□□□ -0.22
SIX1-201ENST00000247182 GLIPR1L2Q4G1C9 344 aa13.67□□□□□ -0.22
SIX1-201ENST00000247182 FAM9BQ8IZU0 186 aa13.67□□□□□ -0.22
SIX1-201ENST00000247182 ARXQ96QS3 562 aa13.66□□□□□ -0.22
SIX1-201ENST00000247182 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
SIX1-201ENST00000247182 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
SIX1-201ENST00000247182 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
SIX1-201ENST00000247182 NEFMP07197 916 aa13.64□□□□□ -0.23
SIX1-201ENST00000247182 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
SIX1-201ENST00000247182 KIF21BO75037 1637 aa13.64□□□□□ -0.23
SIX1-201ENST00000247182 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
SIX1-201ENST00000247182 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
SIX1-201ENST00000247182 RRP7BPQ9NSQ0 103 aa13.61□□□□□ -0.23
SIX1-201ENST00000247182 ARAP1Q96P48 1450 aa13.58□□□□□ -0.24
SIX1-201ENST00000247182 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
SIX1-201ENST00000247182 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
SIX1-201ENST00000247182 CUX2O14529 1486 aa13.57□□□□□ -0.24
SIX1-201ENST00000247182 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
SIX1-201ENST00000247182 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
SIX1-201ENST00000247182 PPP4R2Q9NY27 417 aa13.56□□□□□ -0.24
SIX1-201ENST00000247182 FOXD1Q16676 465 aa13.54□□□□□ -0.24
SIX1-201ENST00000247182 CARMIL1Q5VZK9 1371 aa13.52□□□□□ -0.25
SIX1-201ENST00000247182 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
SIX1-201ENST00000247182 SETD5Q9C0A6 1442 aa13.49□□□□□ -0.25
SIX1-201ENST00000247182 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
SIX1-201ENST00000247182 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
SIX1-201ENST00000247182 FHOD3Q2V2M9 1422 aa13.47□□□□□ -0.25
SIX1-201ENST00000247182 MRS2Q9HD23 443 aa13.46□□□□□ -0.25
SIX1-201ENST00000247182 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
SIX1-201ENST00000247182 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
SIX1-201ENST00000247182 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
SIX1-201ENST00000247182 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
SIX1-201ENST00000247182 ARID4BQ4LE39 1312 aaPredicted RBP13.44□□□□□ -0.26
SIX1-201ENST00000247182 PKNOX2Q96KN3 472 aa13.43□□□□□ -0.26
SIX1-201ENST00000247182 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
SIX1-201ENST00000247182 NAP1L5Q96NT1 182 aaPredicted RBP13.43□□□□□ -0.26
SIX1-201ENST00000247182 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
SIX1-201ENST00000247182 IGF1RP08069 1367 aa13.43□□□□□ -0.26
SIX1-201ENST00000247182 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
SIX1-201ENST00000247182 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
SIX1-201ENST00000247182 FBLN2P98095 1184 aa13.4□□□□□ -0.26
SIX1-201ENST00000247182 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
SIX1-201ENST00000247182 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
SIX1-201ENST00000247182 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
SIX1-201ENST00000247182 CUX1P39880 1505 aa13.37□□□□□ -0.27
SIX1-201ENST00000247182 UBE2Q2Q8WVN8 375 aa13.37□□□□□ -0.27
SIX1-201ENST00000247182 HSPA5P11021 654 aaKnown RBP13.37□□□□□ -0.27
SIX1-201ENST00000247182 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
SIX1-201ENST00000247182 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
SIX1-201ENST00000247182 CCER2I3L3R5 266 aa13.34□□□□□ -0.27
SIX1-201ENST00000247182 EIF4G2P78344 907 aaKnown RBP eCLIP13.33□□□□□ -0.27
SIX1-201ENST00000247182 CCDC184Q52MB2 194 aa13.33□□□□□ -0.28
SIX1-201ENST00000247182 TOP2BQ02880 1626 aa13.33□□□□□ -0.28
SIX1-201ENST00000247182 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
SIX1-201ENST00000247182 RAD54L2Q9Y4B4 1467 aa13.32□□□□□ -0.28
SIX1-201ENST00000247182 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
SIX1-201ENST00000247182 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
SIX1-201ENST00000247182 L3MBTL2Q969R5 705 aa13.28□□□□□ -0.28
SIX1-201ENST00000247182 FHAD1B1AJZ9 1412 aa13.28□□□□□ -0.28
SIX1-201ENST00000247182 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
SIX1-201ENST00000247182 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
SIX1-201ENST00000247182 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
SIX1-201ENST00000247182 GSE1Q14687 1217 aa13.25□□□□□ -0.29
SIX1-201ENST00000247182 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
SIX1-201ENST00000247182 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
SIX1-201ENST00000247182 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
SIX1-201ENST00000247182 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
SIX1-201ENST00000247182 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
SIX1-201ENST00000247182 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
SIX1-201ENST00000247182 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
SIX1-201ENST00000247182 MAPKBP1O60336 1514 aa13.22□□□□□ -0.29
SIX1-201ENST00000247182 HSP90AA2PQ14568 343 aaPredicted RBP13.22□□□□□ -0.29
SIX1-201ENST00000247182 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
SIX1-201ENST00000247182 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
SIX1-201ENST00000247182 TMC1Q8TDI8 760 aa13.21□□□□□ -0.3
SIX1-201ENST00000247182 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
SIX1-201ENST00000247182 ARID3AQ99856 593 aa13.2□□□□□ -0.3
SIX1-201ENST00000247182 CFTRP13569 1480 aa13.19□□□□□ -0.3
SIX1-201ENST00000247182 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
SIX1-201ENST00000247182 C11orf95C9JLR9 678 aaPredicted RBP13.19□□□□□ -0.3
SIX1-201ENST00000247182 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
SIX1-201ENST00000247182 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
SIX1-201ENST00000247182 NESP48681 1621 aa13.17□□□□□ -0.3
SIX1-201ENST00000247182 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
SIX1-201ENST00000247182 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
SIX1-201ENST00000247182 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms