RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TNIKQ9UKE5 1360 aa26.98■■□□□ 1.91
CDKN1A-201ENST00000244741 HRCP23327 699 aa26.92■■□□□ 1.9
CDKN1A-201ENST00000244741 CEP170Q5SW79 1584 aa26.91■■□□□ 1.9
CDKN1A-201ENST00000244741 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
CDKN1A-201ENST00000244741 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
CDKN1A-201ENST00000244741 NUP160Q12769 1436 aa26.84■■□□□ 1.89
CDKN1A-201ENST00000244741 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
CDKN1A-201ENST00000244741 KIAA0586Q9BVV6 1533 aa26.78■■□□□ 1.88
CDKN1A-201ENST00000244741 CLIP1P30622 1438 aa26.78■■□□□ 1.88
CDKN1A-201ENST00000244741 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
CDKN1A-201ENST00000244741 OSCARQ8IYS5 282 aa26.74■■□□□ 1.87
CDKN1A-201ENST00000244741 JPH4Q96JJ6 628 aa26.71■■□□□ 1.87
CDKN1A-201ENST00000244741 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
CDKN1A-201ENST00000244741 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
CDKN1A-201ENST00000244741 CLASP1Q7Z460 1538 aa26.63■■□□□ 1.85
CDKN1A-201ENST00000244741 TRIM26Q12899 539 aaPredicted RBP26.63■■□□□ 1.85
CDKN1A-201ENST00000244741 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
CDKN1A-201ENST00000244741 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
CDKN1A-201ENST00000244741 UGGT2Q9NYU1 1516 aa26.6■■□□□ 1.85
CDKN1A-201ENST00000244741 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.85
CDKN1A-201ENST00000244741 DISP1Q96F81 1524 aa26.57■■□□□ 1.84
CDKN1A-201ENST00000244741 SAMD9Q5K651 1589 aa26.55■■□□□ 1.84
CDKN1A-201ENST00000244741 EFCAB5A4FU69 1503 aa26.53■■□□□ 1.84
CDKN1A-201ENST00000244741 ERCC6L2Q5T890 1561 aa26.53■■□□□ 1.84
CDKN1A-201ENST00000244741 KIAA0556O60303 1618 aa26.51■■□□□ 1.83
CDKN1A-201ENST00000244741 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
CDKN1A-201ENST00000244741 CARMIL2Q6F5E8 1435 aa26.48■■□□□ 1.83
CDKN1A-201ENST00000244741 ATP1B4Q9UN42 357 aaPredicted RBP26.44■■□□□ 1.82
CDKN1A-201ENST00000244741 VPS8Q8N3P4 1428 aa26.41■■□□□ 1.82
CDKN1A-201ENST00000244741 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
CDKN1A-201ENST00000244741 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
CDKN1A-201ENST00000244741 PTPRGP23470 1445 aa26.34■■□□□ 1.81
CDKN1A-201ENST00000244741 FMN1Q68DA7 1419 aa26.34■■□□□ 1.81
CDKN1A-201ENST00000244741 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
CDKN1A-201ENST00000244741 PLB1Q6P1J6 1458 aa26.29■■□□□ 1.8
CDKN1A-201ENST00000244741 ARHGEF11O15085 1522 aa26.27■■□□□ 1.8
CDKN1A-201ENST00000244741 CASKIN1Q8WXD9 1431 aa26.24■■□□□ 1.79
CDKN1A-201ENST00000244741 APLP2Q06481 763 aa26.21■■□□□ 1.79
CDKN1A-201ENST00000244741 FYCO1Q9BQS8 1478 aa26.19■■□□□ 1.78
CDKN1A-201ENST00000244741 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
CDKN1A-201ENST00000244741 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
CDKN1A-201ENST00000244741 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
CDKN1A-201ENST00000244741 RAPGEF6Q8TEU7 1601 aa26.18■■□□□ 1.78
CDKN1A-201ENST00000244741 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
CDKN1A-201ENST00000244741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.16■■□□□ 1.78
CDKN1A-201ENST00000244741 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
CDKN1A-201ENST00000244741 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
CDKN1A-201ENST00000244741 ABCA8O94911 1581 aa26.14■■□□□ 1.78
CDKN1A-201ENST00000244741 NUP153P49790 1475 aaKnown RBP26.14■■□□□ 1.78
CDKN1A-201ENST00000244741 LRRIQ1Q96JM4 1722 aa26.13■■□□□ 1.77
CDKN1A-201ENST00000244741 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
CDKN1A-201ENST00000244741 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
CDKN1A-201ENST00000244741 HECW1Q76N89 1606 aa26.12■■□□□ 1.77
CDKN1A-201ENST00000244741 EPRSP07814 1512 aaKnown RBP26.09■■□□□ 1.77
CDKN1A-201ENST00000244741 ABCC2Q92887 1545 aa26.05■■□□□ 1.76
CDKN1A-201ENST00000244741 TIAM1Q13009 1591 aa26.04■■□□□ 1.76
CDKN1A-201ENST00000244741 ADCY10Q96PN6 1610 aa26.02■■□□□ 1.76
CDKN1A-201ENST00000244741 ATP10BO94823 1461 aa26.02■■□□□ 1.76
CDKN1A-201ENST00000244741 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
CDKN1A-201ENST00000244741 CFAP43Q8NDM7 1665 aa25.98■■□□□ 1.75
CDKN1A-201ENST00000244741 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
CDKN1A-201ENST00000244741 UHRF1BP1LA0JNW5 1464 aa25.97■■□□□ 1.75
CDKN1A-201ENST00000244741 MAGI3Q5TCQ9 1506 aa25.95■■□□□ 1.74
CDKN1A-201ENST00000244741 MTUS2Q5JR59 1369 aa25.95■■□□□ 1.74
CDKN1A-201ENST00000244741 LRRC9Q6ZRR7 1453 aa25.95■■□□□ 1.74
CDKN1A-201ENST00000244741 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
CDKN1A-201ENST00000244741 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
CDKN1A-201ENST00000244741 ZCCHC11Q5TAX3 1644 aaKnown RBP25.91■■□□□ 1.74
CDKN1A-201ENST00000244741 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
CDKN1A-201ENST00000244741 KDM5BQ9UGL1 1544 aa25.9■■□□□ 1.74
CDKN1A-201ENST00000244741 PLEKHD1A6NEE1 506 aa25.89■■□□□ 1.74
CDKN1A-201ENST00000244741 NPM1P06748 294 aaKnown RBP eCLIP25.89■■□□□ 1.74
CDKN1A-201ENST00000244741 KCNH8Q96L42 1107 aa25.86■■□□□ 1.73
CDKN1A-201ENST00000244741 EHBP1L1Q8N3D4 1523 aa25.8■■□□□ 1.72
CDKN1A-201ENST00000244741 TROQ12816 1431 aaPredicted RBP25.8■■□□□ 1.72
CDKN1A-201ENST00000244741 ASXL2Q76L83 1435 aa25.77■■□□□ 1.72
CDKN1A-201ENST00000244741 KIF14Q15058 1648 aa25.76■■□□□ 1.71
CDKN1A-201ENST00000244741 NCOA2Q15596 1464 aa25.76■■□□□ 1.71
CDKN1A-201ENST00000244741 PHLDB1Q86UU1 1377 aa25.75■■□□□ 1.71
CDKN1A-201ENST00000244741 SUPT6HQ7KZ85 1726 aaKnown RBP25.72■■□□□ 1.71
CDKN1A-201ENST00000244741 WDR7Q9Y4E6 1490 aa25.71■■□□□ 1.71
CDKN1A-201ENST00000244741 CCNB3Q8WWL7 1395 aa25.64■■□□□ 1.7
CDKN1A-201ENST00000244741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.61■■□□□ 1.69
CDKN1A-201ENST00000244741 TTC37Q6PGP7 1564 aa25.61■■□□□ 1.69
CDKN1A-201ENST00000244741 ABCC10Q5T3U5 1492 aa25.6■■□□□ 1.69
CDKN1A-201ENST00000244741 MAPKBP1O60336 1514 aa25.6■■□□□ 1.69
CDKN1A-201ENST00000244741 MYOM3Q5VTT5 1437 aa25.59■■□□□ 1.69
CDKN1A-201ENST00000244741 FAM50AQ14320 339 aaKnown RBP25.59■■□□□ 1.69
CDKN1A-201ENST00000244741 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.68
CDKN1A-201ENST00000244741 GPATCH8Q9UKJ3 1502 aaKnown RBP25.56■■□□□ 1.68
CDKN1A-201ENST00000244741 CFDP1Q9UEE9 299 aaPredicted RBP25.55■■□□□ 1.68
CDKN1A-201ENST00000244741 FGD6Q6ZV73 1430 aa25.55■■□□□ 1.68
CDKN1A-201ENST00000244741 ZNF644Q9H582 1327 aaPredicted RBP25.55■■□□□ 1.68
CDKN1A-201ENST00000244741 ITGAEP38570 1179 aa25.54■■□□□ 1.68
CDKN1A-201ENST00000244741 FAM69CQ0P6D2 419 aa25.54■■□□□ 1.68
CDKN1A-201ENST00000244741 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
CDKN1A-201ENST00000244741 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
CDKN1A-201ENST00000244741 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
CDKN1A-201ENST00000244741 ABCA9Q8IUA7 1624 aa25.46■■□□□ 1.67
CDKN1A-201ENST00000244741 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms