RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 MSH5O43196 834 aa12.83□□□□□ -0.36
SRSF6-201ENST00000244020 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
SRSF6-201ENST00000244020 SETD5Q9C0A6 1442 aa12.81□□□□□ -0.36
SRSF6-201ENST00000244020 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
SRSF6-201ENST00000244020 NBR1Q14596 966 aa12.78□□□□□ -0.36
SRSF6-201ENST00000244020 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.36
SRSF6-201ENST00000244020 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
SRSF6-201ENST00000244020 WDR97A6NE52 1622 aa12.77□□□□□ -0.37
SRSF6-201ENST00000244020 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
SRSF6-201ENST00000244020 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
SRSF6-201ENST00000244020 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
SRSF6-201ENST00000244020 CUX2O14529 1486 aa12.74□□□□□ -0.37
SRSF6-201ENST00000244020 GLIPR1L2Q4G1C9 344 aa12.73□□□□□ -0.37
SRSF6-201ENST00000244020 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
SRSF6-201ENST00000244020 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
SRSF6-201ENST00000244020 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
SRSF6-201ENST00000244020 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
SRSF6-201ENST00000244020 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.37
SRSF6-201ENST00000244020 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
SRSF6-201ENST00000244020 FAM9BQ8IZU0 186 aa12.7□□□□□ -0.38
SRSF6-201ENST00000244020 B4GALNT3Q6L9W6 998 aa12.69□□□□□ -0.38
SRSF6-201ENST00000244020 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
SRSF6-201ENST00000244020 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
SRSF6-201ENST00000244020 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
SRSF6-201ENST00000244020 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
SRSF6-201ENST00000244020 PHLDB1Q86UU1 1377 aa12.65□□□□□ -0.38
SRSF6-201ENST00000244020 NPM2Q86SE8 214 aaKnown RBP12.64□□□□□ -0.39
SRSF6-201ENST00000244020 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
SRSF6-201ENST00000244020 NOP58Q9Y2X3 529 aaKnown RBP12.64□□□□□ -0.39
SRSF6-201ENST00000244020 MRS2Q9HD23 443 aa12.63□□□□□ -0.39
SRSF6-201ENST00000244020 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
SRSF6-201ENST00000244020 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
SRSF6-201ENST00000244020 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
SRSF6-201ENST00000244020 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
SRSF6-201ENST00000244020 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRSF6-201ENST00000244020 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
SRSF6-201ENST00000244020 TIAM1Q13009 1591 aa12.57□□□□□ -0.4
SRSF6-201ENST00000244020 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
SRSF6-201ENST00000244020 CCDC136Q96JN2 1154 aa12.57□□□□□ -0.4
SRSF6-201ENST00000244020 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
SRSF6-201ENST00000244020 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
SRSF6-201ENST00000244020 ARXQ96QS3 562 aa12.55□□□□□ -0.4
SRSF6-201ENST00000244020 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
SRSF6-201ENST00000244020 CCDC184Q52MB2 194 aa12.53□□□□□ -0.4
SRSF6-201ENST00000244020 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
SRSF6-201ENST00000244020 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
SRSF6-201ENST00000244020 CHIC2Q9UKJ5 165 aa12.53□□□□□ -0.4
SRSF6-201ENST00000244020 CUX1P39880 1505 aa12.52□□□□□ -0.41
SRSF6-201ENST00000244020 IGF1RP08069 1367 aa12.52□□□□□ -0.41
SRSF6-201ENST00000244020 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
SRSF6-201ENST00000244020 RRP7BPQ9NSQ0 103 aa12.51□□□□□ -0.41
SRSF6-201ENST00000244020 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
SRSF6-201ENST00000244020 SENP3-EIF4A1A0A087X0R7 540 aa12.51□□□□□ -0.41
SRSF6-201ENST00000244020 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
SRSF6-201ENST00000244020 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
SRSF6-201ENST00000244020 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
SRSF6-201ENST00000244020 MAP3K1Q13233 1512 aa12.49□□□□□ -0.41
SRSF6-201ENST00000244020 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
SRSF6-201ENST00000244020 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
SRSF6-201ENST00000244020 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
SRSF6-201ENST00000244020 FHOD3Q2V2M9 1422 aa12.47□□□□□ -0.41
SRSF6-201ENST00000244020 UACAQ9BZF9 1416 aa12.47□□□□□ -0.41
SRSF6-201ENST00000244020 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
SRSF6-201ENST00000244020 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
SRSF6-201ENST00000244020 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
SRSF6-201ENST00000244020 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
SRSF6-201ENST00000244020 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
SRSF6-201ENST00000244020 FOXD1Q16676 465 aa12.41□□□□□ -0.42
SRSF6-201ENST00000244020 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
SRSF6-201ENST00000244020 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
SRSF6-201ENST00000244020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.4□□□□□ -0.422e-17■■□□□ 11.8
SRSF6-201ENST00000244020 NEFMP07197 916 aa12.39□□□□□ -0.43
SRSF6-201ENST00000244020 NUDCQ9Y266 331 aa12.39□□□□□ -0.43
SRSF6-201ENST00000244020 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
SRSF6-201ENST00000244020 HFM1A2PYH4 1435 aa12.39□□□□□ -0.43
SRSF6-201ENST00000244020 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
SRSF6-201ENST00000244020 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
SRSF6-201ENST00000244020 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
SRSF6-201ENST00000244020 AKNAQ7Z591 1439 aa12.38□□□□□ -0.43
SRSF6-201ENST00000244020 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
SRSF6-201ENST00000244020 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
SRSF6-201ENST00000244020 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
SRSF6-201ENST00000244020 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
SRSF6-201ENST00000244020 NAIPQ13075 1403 aa12.35□□□□□ -0.43
SRSF6-201ENST00000244020 CASKIN1Q8WXD9 1431 aa12.35□□□□□ -0.43
SRSF6-201ENST00000244020 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
SRSF6-201ENST00000244020 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
SRSF6-201ENST00000244020 CFTRP13569 1480 aa12.35□□□□□ -0.43
SRSF6-201ENST00000244020 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.43
SRSF6-201ENST00000244020 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.445e-8■■■■■ 28.1
SRSF6-201ENST00000244020 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
SRSF6-201ENST00000244020 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
SRSF6-201ENST00000244020 SLC4A1APQ9BWU0 796 aaKnown RBP12.32□□□□□ -0.44
SRSF6-201ENST00000244020 PTPN23Q9H3S7 1636 aa12.31□□□□□ -0.44
SRSF6-201ENST00000244020 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
SRSF6-201ENST00000244020 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
SRSF6-201ENST00000244020 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
SRSF6-201ENST00000244020 MYOM3Q5VTT5 1437 aa12.3□□□□□ -0.44
SRSF6-201ENST00000244020 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
SRSF6-201ENST00000244020 NBPF8Q3BBV2 869 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms