RNA–Protein interactions for RNA: ENST00000242465.3

SRGN-201, Transcript of serglycin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGN, Length 1,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGN-201ENST00000242465 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
SRGN-201ENST00000242465 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
SRGN-201ENST00000242465 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
SRGN-201ENST00000242465 CYB5RLQ6IPT4 315 aa19.06■□□□□ 0.64
SRGN-201ENST00000242465 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
SRGN-201ENST00000242465 PPP4R3CPQ6ZMV5 832 aa19.04■□□□□ 0.64
SRGN-201ENST00000242465 NUP160Q12769 1436 aa19.03■□□□□ 0.64
SRGN-201ENST00000242465 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
SRGN-201ENST00000242465 ERCC6L2Q5T890 1561 aa18.94■□□□□ 0.62
SRGN-201ENST00000242465 IGF1RP08069 1367 aa18.93■□□□□ 0.62
SRGN-201ENST00000242465 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
SRGN-201ENST00000242465 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
SRGN-201ENST00000242465 CUL7Q14999 1698 aa18.89■□□□□ 0.61
SRGN-201ENST00000242465 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.61
SRGN-201ENST00000242465 PRG4Q92954 1404 aaPredicted RBP18.81■□□□□ 0.6
SRGN-201ENST00000242465 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
SRGN-201ENST00000242465 JPH4Q96JJ6 628 aa18.79■□□□□ 0.6
SRGN-201ENST00000242465 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
SRGN-201ENST00000242465 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
SRGN-201ENST00000242465 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
SRGN-201ENST00000242465 IQGAP2Q13576 1575 aa18.65■□□□□ 0.58
SRGN-201ENST00000242465 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
SRGN-201ENST00000242465 PRXQ9BXM0 1461 aa18.58■□□□□ 0.56
SRGN-201ENST00000242465 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
SRGN-201ENST00000242465 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
SRGN-201ENST00000242465 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
SRGN-201ENST00000242465 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
SRGN-201ENST00000242465 PTPRGP23470 1445 aa18.53■□□□□ 0.56
SRGN-201ENST00000242465 CTTNBP2Q8WZ74 1663 aa18.53■□□□□ 0.56
SRGN-201ENST00000242465 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
SRGN-201ENST00000242465 MAPKBP1O60336 1514 aa18.49■□□□□ 0.55
SRGN-201ENST00000242465 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
SRGN-201ENST00000242465 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
SRGN-201ENST00000242465 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
SRGN-201ENST00000242465 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
SRGN-201ENST00000242465 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
SRGN-201ENST00000242465 ABCC10Q5T3U5 1492 aa18.43■□□□□ 0.54
SRGN-201ENST00000242465 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
SRGN-201ENST00000242465 EEA1Q15075 1411 aa18.42■□□□□ 0.54
SRGN-201ENST00000242465 UHRF1BP1LA0JNW5 1464 aa18.42■□□□□ 0.54
SRGN-201ENST00000242465 ABCC2Q92887 1545 aa18.42■□□□□ 0.54
SRGN-201ENST00000242465 UACAQ9BZF9 1416 aa18.41■□□□□ 0.54
SRGN-201ENST00000242465 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
SRGN-201ENST00000242465 KCNA4P22459 653 aa18.38■□□□□ 0.53
SRGN-201ENST00000242465 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
SRGN-201ENST00000242465 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
SRGN-201ENST00000242465 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
SRGN-201ENST00000242465 KDM5BQ9UGL1 1544 aa18.34■□□□□ 0.53
SRGN-201ENST00000242465 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
SRGN-201ENST00000242465 PLB1Q6P1J6 1458 aa18.33■□□□□ 0.53
SRGN-201ENST00000242465 ASXL2Q76L83 1435 aa18.33■□□□□ 0.53
SRGN-201ENST00000242465 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
SRGN-201ENST00000242465 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
SRGN-201ENST00000242465 KIF21BO75037 1637 aa18.31■□□□□ 0.52
SRGN-201ENST00000242465 ABCA8O94911 1581 aa18.3■□□□□ 0.52
SRGN-201ENST00000242465 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
SRGN-201ENST00000242465 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
SRGN-201ENST00000242465 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
SRGN-201ENST00000242465 GLI2P10070 1586 aa18.25■□□□□ 0.51
SRGN-201ENST00000242465 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
SRGN-201ENST00000242465 EPRSP07814 1512 aaKnown RBP18.23■□□□□ 0.51
SRGN-201ENST00000242465 PPRC1Q5VV67 1664 aaKnown RBP18.21■□□□□ 0.51
SRGN-201ENST00000242465 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
SRGN-201ENST00000242465 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
SRGN-201ENST00000242465 MAP3K4Q9Y6R4 1608 aa18.18■□□□□ 0.5
SRGN-201ENST00000242465 KDM6BO15054 1643 aa18.16■□□□□ 0.5
SRGN-201ENST00000242465 FHOD3Q2V2M9 1422 aa18.16■□□□□ 0.5
SRGN-201ENST00000242465 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
SRGN-201ENST00000242465 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
SRGN-201ENST00000242465 ATP10BO94823 1461 aa18.14■□□□□ 0.49
SRGN-201ENST00000242465 EFCAB5A4FU69 1503 aa18.13■□□□□ 0.49
SRGN-201ENST00000242465 ARID3CA6NKF2 412 aa18.13■□□□□ 0.49
SRGN-201ENST00000242465 NPM3O75607 178 aaKnown RBP18.12■□□□□ 0.49
SRGN-201ENST00000242465 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
SRGN-201ENST00000242465 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
SRGN-201ENST00000242465 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
SRGN-201ENST00000242465 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
SRGN-201ENST00000242465 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
SRGN-201ENST00000242465 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
SRGN-201ENST00000242465 CD109Q6YHK3 1445 aa18.04■□□□□ 0.48
SRGN-201ENST00000242465 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
SRGN-201ENST00000242465 MAGI3Q5TCQ9 1506 aa18.03■□□□□ 0.48
SRGN-201ENST00000242465 ABCA9Q8IUA7 1624 aa18■□□□□ 0.47
SRGN-201ENST00000242465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
SRGN-201ENST00000242465 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
SRGN-201ENST00000242465 CDK13Q14004 1512 aaKnown RBP17.96■□□□□ 0.47
SRGN-201ENST00000242465 FMN1Q68DA7 1419 aa17.95■□□□□ 0.46
SRGN-201ENST00000242465 HECW1Q76N89 1606 aa17.92■□□□□ 0.46
SRGN-201ENST00000242465 PLEKHD1A6NEE1 506 aa17.89■□□□□ 0.45
SRGN-201ENST00000242465 ARAP3Q8WWN8 1544 aa17.88■□□□□ 0.45
SRGN-201ENST00000242465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
SRGN-201ENST00000242465 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
SRGN-201ENST00000242465 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
SRGN-201ENST00000242465 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
SRGN-201ENST00000242465 PCF11O94913 1555 aaKnown RBP17.85■□□□□ 0.45
SRGN-201ENST00000242465 ATP1B4Q9UN42 357 aaPredicted RBP17.85■□□□□ 0.45
SRGN-201ENST00000242465 NEO1Q92859 1461 aa17.84■□□□□ 0.45
SRGN-201ENST00000242465 CLIP1P30622 1438 aa17.82■□□□□ 0.44
SRGN-201ENST00000242465 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
SRGN-201ENST00000242465 FRMPD1Q5SYB0 1578 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms