RNA–Protein interactions for RNA: ENST00000240719.7

ZNF549-201, Transcript of zinc finger protein 549, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF549, Length 3,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-201ENST00000240719 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
ZNF549-201ENST00000240719 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
ZNF549-201ENST00000240719 KIF27Q86VH2 1401 aa16.33■□□□□ 0.21
ZNF549-201ENST00000240719 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
ZNF549-201ENST00000240719 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
ZNF549-201ENST00000240719 NBR1Q14596 966 aa16.32■□□□□ 0.2
ZNF549-201ENST00000240719 FBLN2P98095 1184 aa16.32■□□□□ 0.2
ZNF549-201ENST00000240719 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
ZNF549-201ENST00000240719 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
ZNF549-201ENST00000240719 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
ZNF549-201ENST00000240719 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
ZNF549-201ENST00000240719 FOXD1Q16676 465 aa16.3■□□□□ 0.2
ZNF549-201ENST00000240719 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
ZNF549-201ENST00000240719 CUX2O14529 1486 aa16.24■□□□□ 0.19
ZNF549-201ENST00000240719 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
ZNF549-201ENST00000240719 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
ZNF549-201ENST00000240719 RTN4Q9NQC3 1192 aaKnown RBP16.2■□□□□ 0.18
ZNF549-201ENST00000240719 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
ZNF549-201ENST00000240719 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
ZNF549-201ENST00000240719 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
ZNF549-201ENST00000240719 KIF21BO75037 1637 aa16.19■□□□□ 0.18
ZNF549-201ENST00000240719 CCDC136Q96JN2 1154 aa16.19■□□□□ 0.18
ZNF549-201ENST00000240719 SYNJ1O43426 1573 aa16.18■□□□□ 0.18
ZNF549-201ENST00000240719 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
ZNF549-201ENST00000240719 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
ZNF549-201ENST00000240719 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
ZNF549-201ENST00000240719 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
ZNF549-201ENST00000240719 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
ZNF549-201ENST00000240719 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
ZNF549-201ENST00000240719 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
ZNF549-201ENST00000240719 FHOD3Q2V2M9 1422 aa16.11■□□□□ 0.17
ZNF549-201ENST00000240719 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
ZNF549-201ENST00000240719 TMC1Q8TDI8 760 aa16.1■□□□□ 0.17
ZNF549-201ENST00000240719 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
ZNF549-201ENST00000240719 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
ZNF549-201ENST00000240719 CCER2I3L3R5 266 aa16.04■□□□□ 0.16
ZNF549-201ENST00000240719 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
ZNF549-201ENST00000240719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
ZNF549-201ENST00000240719 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.15
ZNF549-201ENST00000240719 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
ZNF549-201ENST00000240719 L3MBTL2Q969R5 705 aa16■□□□□ 0.15
ZNF549-201ENST00000240719 PPP4R2Q9NY27 417 aa15.99■□□□□ 0.15
ZNF549-201ENST00000240719 IGF1RP08069 1367 aa15.98■□□□□ 0.15
ZNF549-201ENST00000240719 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
ZNF549-201ENST00000240719 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
ZNF549-201ENST00000240719 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
ZNF549-201ENST00000240719 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
ZNF549-201ENST00000240719 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
ZNF549-201ENST00000240719 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
ZNF549-201ENST00000240719 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
ZNF549-201ENST00000240719 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
ZNF549-201ENST00000240719 RRBP1Q9P2E9 1410 aaKnown RBP15.9■□□□□ 0.14
ZNF549-201ENST00000240719 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
ZNF549-201ENST00000240719 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
ZNF549-201ENST00000240719 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
ZNF549-201ENST00000240719 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
ZNF549-201ENST00000240719 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
ZNF549-201ENST00000240719 WASHC2AQ641Q2 1341 aa15.85■□□□□ 0.13
ZNF549-201ENST00000240719 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
ZNF549-201ENST00000240719 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
ZNF549-201ENST00000240719 GLIPR1L2Q4G1C9 344 aa15.84■□□□□ 0.13
ZNF549-201ENST00000240719 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
ZNF549-201ENST00000240719 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
ZNF549-201ENST00000240719 ARXQ96QS3 562 aa15.83■□□□□ 0.13
ZNF549-201ENST00000240719 LRRC9Q6ZRR7 1453 aa15.83■□□□□ 0.12
ZNF549-201ENST00000240719 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
ZNF549-201ENST00000240719 TSPY4P0CV99 314 aa15.82■□□□□ 0.12
ZNF549-201ENST00000240719 TSPY10P0CW01 314 aa15.82■□□□□ 0.12
ZNF549-201ENST00000240719 DCAF11Q8TEB1 546 aa15.81■□□□□ 0.12
ZNF549-201ENST00000240719 ZNF644Q9H582 1327 aaPredicted RBP15.81■□□□□ 0.12
ZNF549-201ENST00000240719 MSH5O43196 834 aa15.81■□□□□ 0.12
ZNF549-201ENST00000240719 PKD2Q13563 968 aa15.81■□□□□ 0.12
ZNF549-201ENST00000240719 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
ZNF549-201ENST00000240719 CUX1P39880 1505 aa15.79■□□□□ 0.12
ZNF549-201ENST00000240719 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
ZNF549-201ENST00000240719 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
ZNF549-201ENST00000240719 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
ZNF549-201ENST00000240719 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
ZNF549-201ENST00000240719 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
ZNF549-201ENST00000240719 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
ZNF549-201ENST00000240719 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
ZNF549-201ENST00000240719 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
ZNF549-201ENST00000240719 NEFMP07197 916 aa15.72■□□□□ 0.11
ZNF549-201ENST00000240719 RGS3P49796 1198 aa15.72■□□□□ 0.11
ZNF549-201ENST00000240719 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
ZNF549-201ENST00000240719 PLIN1O60240 522 aa15.71■□□□□ 0.11
ZNF549-201ENST00000240719 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.11
ZNF549-201ENST00000240719 ERICH3Q5RHP9 1530 aa15.7■□□□□ 0.1
ZNF549-201ENST00000240719 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
ZNF549-201ENST00000240719 PAK3O75914 559 aaPredicted RBP15.69■□□□□ 0.1
ZNF549-201ENST00000240719 KIF7Q2M1P5 1343 aa15.69■□□□□ 0.1
ZNF549-201ENST00000240719 NEUROD2Q15784 382 aa15.68■□□□□ 0.1
ZNF549-201ENST00000240719 ST20-MTHFSA0A0A6YYL1 179 aa15.68■□□□□ 0.1
ZNF549-201ENST00000240719 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
ZNF549-201ENST00000240719 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
ZNF549-201ENST00000240719 FANCD2Q9BXW9 1451 aa15.66■□□□□ 0.1
ZNF549-201ENST00000240719 EXOC6Q8TAG9 804 aa15.66■□□□□ 0.1
ZNF549-201ENST00000240719 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
ZNF549-201ENST00000240719 SLC4A3P48751 1232 aa15.65■□□□□ 0.1
ZNF549-201ENST00000240719 TNNT2P45379 298 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms