RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
FAM53C-201ENST00000239906 FKBP8Q14318 412 aa15.09■□□□□ 0.01
FAM53C-201ENST00000239906 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
FAM53C-201ENST00000239906 FAM9BQ8IZU0 186 aa15.05■□□□□ 0
FAM53C-201ENST00000239906 NEFMP07197 916 aa15.05■□□□□ -0
FAM53C-201ENST00000239906 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
FAM53C-201ENST00000239906 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
FAM53C-201ENST00000239906 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
FAM53C-201ENST00000239906 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
FAM53C-201ENST00000239906 CFDP1Q9UEE9 299 aaPredicted RBP15.04■□□□□ -0
FAM53C-201ENST00000239906 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
FAM53C-201ENST00000239906 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
FAM53C-201ENST00000239906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.012e-9■■■■■ 30.3
FAM53C-201ENST00000239906 MRS2Q9HD23 443 aa14.99□□□□□ -0.01
FAM53C-201ENST00000239906 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
FAM53C-201ENST00000239906 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
FAM53C-201ENST00000239906 BCL11AQ9H165 835 aa14.97□□□□□ -0.01
FAM53C-201ENST00000239906 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
FAM53C-201ENST00000239906 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
FAM53C-201ENST00000239906 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
FAM53C-201ENST00000239906 SETD5Q9C0A6 1442 aa14.96□□□□□ -0.01
FAM53C-201ENST00000239906 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
FAM53C-201ENST00000239906 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
FAM53C-201ENST00000239906 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
FAM53C-201ENST00000239906 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
FAM53C-201ENST00000239906 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
FAM53C-201ENST00000239906 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
FAM53C-201ENST00000239906 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
FAM53C-201ENST00000239906 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
FAM53C-201ENST00000239906 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
FAM53C-201ENST00000239906 SIN3AQ96ST3 1273 aa14.89□□□□□ -0.03
FAM53C-201ENST00000239906 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
FAM53C-201ENST00000239906 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
FAM53C-201ENST00000239906 CDCA8Q53HL2 280 aa14.87□□□□□ -0.03
FAM53C-201ENST00000239906 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
FAM53C-201ENST00000239906 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
FAM53C-201ENST00000239906 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
FAM53C-201ENST00000239906 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
FAM53C-201ENST00000239906 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
FAM53C-201ENST00000239906 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
FAM53C-201ENST00000239906 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
FAM53C-201ENST00000239906 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
FAM53C-201ENST00000239906 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
FAM53C-201ENST00000239906 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
FAM53C-201ENST00000239906 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
FAM53C-201ENST00000239906 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
FAM53C-201ENST00000239906 UNC13AQ9UPW8 1703 aa14.78□□□□□ -0.04
FAM53C-201ENST00000239906 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
FAM53C-201ENST00000239906 SYNJ1O43426 1573 aa14.74□□□□□ -0.05
FAM53C-201ENST00000239906 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
FAM53C-201ENST00000239906 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
FAM53C-201ENST00000239906 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
FAM53C-201ENST00000239906 IGF1RP08069 1367 aa14.73□□□□□ -0.05
FAM53C-201ENST00000239906 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
FAM53C-201ENST00000239906 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
FAM53C-201ENST00000239906 KNSTRNQ9Y448 316 aa14.71□□□□□ -0.05
FAM53C-201ENST00000239906 KIF21BO75037 1637 aa14.71□□□□□ -0.05
FAM53C-201ENST00000239906 SENP3-EIF4A1A0A087X0R7 540 aa14.7□□□□□ -0.06
FAM53C-201ENST00000239906 CCDC18Q5T9S5 1454 aa14.7□□□□□ -0.06
FAM53C-201ENST00000239906 RSPH4AQ5TD94 716 aa14.7□□□□□ -0.06
FAM53C-201ENST00000239906 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
FAM53C-201ENST00000239906 MPHOSPH9Q99550 1183 aa14.69□□□□□ -0.06
FAM53C-201ENST00000239906 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
FAM53C-201ENST00000239906 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
FAM53C-201ENST00000239906 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
FAM53C-201ENST00000239906 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
FAM53C-201ENST00000239906 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 KANK1Q14678 1352 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 CFAP53Q96M91 514 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 PKD2Q13563 968 aa14.65□□□□□ -0.06
FAM53C-201ENST00000239906 CFTRP13569 1480 aa14.65□□□□□ -0.06
FAM53C-201ENST00000239906 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
FAM53C-201ENST00000239906 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
FAM53C-201ENST00000239906 TMF1P82094 1093 aa14.64□□□□□ -0.07
FAM53C-201ENST00000239906 DCAF11Q8TEB1 546 aa14.64□□□□□ -0.07
FAM53C-201ENST00000239906 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
FAM53C-201ENST00000239906 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
FAM53C-201ENST00000239906 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
FAM53C-201ENST00000239906 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
FAM53C-201ENST00000239906 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 NUP155O75694 1391 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 NBR1Q14596 966 aa14.59□□□□□ -0.07
FAM53C-201ENST00000239906 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
FAM53C-201ENST00000239906 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
FAM53C-201ENST00000239906 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
FAM53C-201ENST00000239906 NUDCQ9Y266 331 aa14.53□□□□□ -0.08
FAM53C-201ENST00000239906 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.08
FAM53C-201ENST00000239906 RALBP1Q15311 655 aa14.52□□□□□ -0.08
FAM53C-201ENST00000239906 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.08
FAM53C-201ENST00000239906 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 CUX1P39880 1505 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 FOXD1Q16676 465 aa14.5□□□□□ -0.09
FAM53C-201ENST00000239906 MYH16Q9H6N6 1097 aa14.5□□□□□ -0.09
FAM53C-201ENST00000239906 FGD6Q6ZV73 1430 aa14.5□□□□□ -0.09
FAM53C-201ENST00000239906 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms