RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.61
PCDHB5-201ENST00000231134 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.6
PCDHB5-201ENST00000231134 CCER2I3L3R5 266 aa18.83■□□□□ 0.6
PCDHB5-201ENST00000231134 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
PCDHB5-201ENST00000231134 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
PCDHB5-201ENST00000231134 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.59
PCDHB5-201ENST00000231134 NEFMP07197 916 aa18.75■□□□□ 0.59
PCDHB5-201ENST00000231134 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
PCDHB5-201ENST00000231134 IPO9Q96P70 1041 aaKnown RBP18.73■□□□□ 0.59
PCDHB5-201ENST00000231134 BAZ1BQ9UIG0 1483 aaKnown RBP18.72■□□□□ 0.59
PCDHB5-201ENST00000231134 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
PCDHB5-201ENST00000231134 EEA1Q15075 1411 aa18.69■□□□□ 0.58
PCDHB5-201ENST00000231134 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
PCDHB5-201ENST00000231134 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
PCDHB5-201ENST00000231134 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
PCDHB5-201ENST00000231134 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
PCDHB5-201ENST00000231134 NACADO15069 1562 aa18.6■□□□□ 0.57
PCDHB5-201ENST00000231134 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
PCDHB5-201ENST00000231134 PKNOX2Q96KN3 472 aa18.58■□□□□ 0.57
PCDHB5-201ENST00000231134 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
PCDHB5-201ENST00000231134 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
PCDHB5-201ENST00000231134 POLR3GLQ9BT43 218 aa18.54■□□□□ 0.56
PCDHB5-201ENST00000231134 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
PCDHB5-201ENST00000231134 P3H3Q8IVL6 736 aa18.52■□□□□ 0.55
PCDHB5-201ENST00000231134 PABPN1Q86U42 306 aaKnown RBP eCLIP18.51■□□□□ 0.55
PCDHB5-201ENST00000231134 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
PCDHB5-201ENST00000231134 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
PCDHB5-201ENST00000231134 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
PCDHB5-201ENST00000231134 KIF21BO75037 1637 aa18.46■□□□□ 0.55
PCDHB5-201ENST00000231134 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
PCDHB5-201ENST00000231134 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
PCDHB5-201ENST00000231134 MAPKBP1O60336 1514 aa18.4■□□□□ 0.54
PCDHB5-201ENST00000231134 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
PCDHB5-201ENST00000231134 GSE1Q14687 1217 aa18.4■□□□□ 0.54
PCDHB5-201ENST00000231134 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.54
PCDHB5-201ENST00000231134 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
PCDHB5-201ENST00000231134 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
PCDHB5-201ENST00000231134 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
PCDHB5-201ENST00000231134 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
PCDHB5-201ENST00000231134 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
PCDHB5-201ENST00000231134 FRAT1Q92837 279 aaPredicted RBP18.36■□□□□ 0.53
PCDHB5-201ENST00000231134 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
PCDHB5-201ENST00000231134 GLIPR1L2Q4G1C9 344 aa18.34■□□□□ 0.53
PCDHB5-201ENST00000231134 ARXQ96QS3 562 aa18.34■□□□□ 0.53
PCDHB5-201ENST00000231134 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
PCDHB5-201ENST00000231134 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
PCDHB5-201ENST00000231134 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
PCDHB5-201ENST00000231134 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
PCDHB5-201ENST00000231134 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
PCDHB5-201ENST00000231134 ZBED9Q6R2W3 1325 aa18.3■□□□□ 0.52
PCDHB5-201ENST00000231134 PDE4AP27815 886 aa18.3■□□□□ 0.52
PCDHB5-201ENST00000231134 NFKBIBQ15653 356 aa18.28■□□□□ 0.52
PCDHB5-201ENST00000231134 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
PCDHB5-201ENST00000231134 SYNJ1O43426 1573 aa18.27■□□□□ 0.51
PCDHB5-201ENST00000231134 ZMYND15Q9H091 742 aa18.25■□□□□ 0.51
PCDHB5-201ENST00000231134 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
PCDHB5-201ENST00000231134 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
PCDHB5-201ENST00000231134 NUDCQ9Y266 331 aa18.21■□□□□ 0.51
PCDHB5-201ENST00000231134 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCDHB5-201ENST00000231134 NAP1L5Q96NT1 182 aaPredicted RBP18.21■□□□□ 0.51
PCDHB5-201ENST00000231134 CUX2O14529 1486 aa18.21■□□□□ 0.51
PCDHB5-201ENST00000231134 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
PCDHB5-201ENST00000231134 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
PCDHB5-201ENST00000231134 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
PCDHB5-201ENST00000231134 TCERG1O14776 1098 aaKnown RBP18.18■□□□□ 0.5
PCDHB5-201ENST00000231134 ZNF326Q5BKZ1 582 aaKnown RBP18.18■□□□□ 0.5
PCDHB5-201ENST00000231134 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
PCDHB5-201ENST00000231134 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
PCDHB5-201ENST00000231134 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
PCDHB5-201ENST00000231134 BACH2Q9BYV9 841 aa18.15■□□□□ 0.5
PCDHB5-201ENST00000231134 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.5
PCDHB5-201ENST00000231134 PODXL2Q9NZ53 605 aa18.14■□□□□ 0.5
PCDHB5-201ENST00000231134 FOXD1Q16676 465 aa18.14■□□□□ 0.49
PCDHB5-201ENST00000231134 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
PCDHB5-201ENST00000231134 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
PCDHB5-201ENST00000231134 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
PCDHB5-201ENST00000231134 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
PCDHB5-201ENST00000231134 HSP90AA2PQ14568 343 aaPredicted RBP18.09■□□□□ 0.49
PCDHB5-201ENST00000231134 ARID3CA6NKF2 412 aa18.06■□□□□ 0.48
PCDHB5-201ENST00000231134 TMC1Q8TDI8 760 aa18.06■□□□□ 0.48
PCDHB5-201ENST00000231134 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
PCDHB5-201ENST00000231134 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
PCDHB5-201ENST00000231134 RRAGDQ9NQL2 400 aaPredicted RBP18.03■□□□□ 0.48
PCDHB5-201ENST00000231134 PLIN1O60240 522 aa18.03■□□□□ 0.48
PCDHB5-201ENST00000231134 HSP90AA1P07900 732 aaKnown RBP18.03■□□□□ 0.48
PCDHB5-201ENST00000231134 RRP1P56182 461 aaKnown RBP18.01■□□□□ 0.47
PCDHB5-201ENST00000231134 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
PCDHB5-201ENST00000231134 A0A0U1RQG5 324 aaPredicted RBP18■□□□□ 0.47
PCDHB5-201ENST00000231134 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
PCDHB5-201ENST00000231134 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
PCDHB5-201ENST00000231134 POGKQ9P215 609 aa17.98■□□□□ 0.47
PCDHB5-201ENST00000231134 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
PCDHB5-201ENST00000231134 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
PCDHB5-201ENST00000231134 MS4A1P11836 297 aa17.97■□□□□ 0.47
PCDHB5-201ENST00000231134 RGS3P49796 1198 aa17.96■□□□□ 0.47
PCDHB5-201ENST00000231134 SLKQ9H2G2 1235 aaPredicted RBP17.94■□□□□ 0.46
PCDHB5-201ENST00000231134 L3MBTL2Q969R5 705 aa17.94■□□□□ 0.46
PCDHB5-201ENST00000231134 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
PCDHB5-201ENST00000231134 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
PCDHB5-201ENST00000231134 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms