RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CEP170Q5SW79 1584 aa14.32□□□□□ -0.12
HLA-DOA-201ENST00000229829 UBTFP17480 764 aaKnown RBP14.3□□□□□ -0.12
HLA-DOA-201ENST00000229829 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
HLA-DOA-201ENST00000229829 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
HLA-DOA-201ENST00000229829 WRNQ14191 1432 aaPredicted RBP eCLIP14.29□□□□□ -0.12
HLA-DOA-201ENST00000229829 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
HLA-DOA-201ENST00000229829 GLI2P10070 1586 aa14.28□□□□□ -0.12
HLA-DOA-201ENST00000229829 TNIKQ9UKE5 1360 aa14.27□□□□□ -0.13
HLA-DOA-201ENST00000229829 MAPKBP1O60336 1514 aa14.26□□□□□ -0.13
HLA-DOA-201ENST00000229829 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
HLA-DOA-201ENST00000229829 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
HLA-DOA-201ENST00000229829 UGGT2Q9NYU1 1516 aa14.21□□□□□ -0.13
HLA-DOA-201ENST00000229829 UHRF1BP1LA0JNW5 1464 aa14.21□□□□□ -0.13
HLA-DOA-201ENST00000229829 KDM5BQ9UGL1 1544 aa14.19□□□□□ -0.14
HLA-DOA-201ENST00000229829 DIEXFQ68CQ4 756 aaKnown RBP14.19□□□□□ -0.14
HLA-DOA-201ENST00000229829 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
HLA-DOA-201ENST00000229829 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
HLA-DOA-201ENST00000229829 EEA1Q15075 1411 aa14.18□□□□□ -0.14
HLA-DOA-201ENST00000229829 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOA-201ENST00000229829 KIF21BO75037 1637 aa14.17□□□□□ -0.14
HLA-DOA-201ENST00000229829 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
HLA-DOA-201ENST00000229829 GRIN2AQ12879 1464 aa14.15□□□□□ -0.15
HLA-DOA-201ENST00000229829 ARHGEF11O15085 1522 aa14.14□□□□□ -0.15
HLA-DOA-201ENST00000229829 MAP3K4Q9Y6R4 1608 aa14.13□□□□□ -0.15
HLA-DOA-201ENST00000229829 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
HLA-DOA-201ENST00000229829 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
HLA-DOA-201ENST00000229829 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
HLA-DOA-201ENST00000229829 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
HLA-DOA-201ENST00000229829 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
HLA-DOA-201ENST00000229829 CLIP1P30622 1438 aa14.04□□□□□ -0.16
HLA-DOA-201ENST00000229829 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
HLA-DOA-201ENST00000229829 ZNF316A6NFI3 1004 aaPredicted RBP14.03□□□□□ -0.16
HLA-DOA-201ENST00000229829 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
HLA-DOA-201ENST00000229829 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
HLA-DOA-201ENST00000229829 ABCA8O94911 1581 aa14□□□□□ -0.17
HLA-DOA-201ENST00000229829 CFAP43Q8NDM7 1665 aa14□□□□□ -0.17
HLA-DOA-201ENST00000229829 KIAA0556O60303 1618 aa14□□□□□ -0.17
HLA-DOA-201ENST00000229829 BCL11AQ9H165 835 aa13.99□□□□□ -0.17
HLA-DOA-201ENST00000229829 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
HLA-DOA-201ENST00000229829 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
HLA-DOA-201ENST00000229829 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
HLA-DOA-201ENST00000229829 KIAA0586Q9BVV6 1533 aa13.96□□□□□ -0.17
HLA-DOA-201ENST00000229829 ARAP3Q8WWN8 1544 aa13.95□□□□□ -0.18
HLA-DOA-201ENST00000229829 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
HLA-DOA-201ENST00000229829 APLP2Q06481 763 aa13.95□□□□□ -0.18
HLA-DOA-201ENST00000229829 IQGAP2Q13576 1575 aa13.94□□□□□ -0.18
HLA-DOA-201ENST00000229829 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
HLA-DOA-201ENST00000229829 MIER1Q8N108 512 aa13.91□□□□□ -0.18
HLA-DOA-201ENST00000229829 RAD54L2Q9Y4B4 1467 aa13.9□□□□□ -0.18
HLA-DOA-201ENST00000229829 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
HLA-DOA-201ENST00000229829 DISP1Q96F81 1524 aa13.87□□□□□ -0.19
HLA-DOA-201ENST00000229829 ABCA9Q8IUA7 1624 aa13.86□□□□□ -0.19
HLA-DOA-201ENST00000229829 LRRIQ1Q96JM4 1722 aa13.86□□□□□ -0.19
HLA-DOA-201ENST00000229829 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
HLA-DOA-201ENST00000229829 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
HLA-DOA-201ENST00000229829 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.19
HLA-DOA-201ENST00000229829 ZCCHC11Q5TAX3 1644 aaKnown RBP13.83□□□□□ -0.2
HLA-DOA-201ENST00000229829 ABCC2Q92887 1545 aa13.81□□□□□ -0.2
HLA-DOA-201ENST00000229829 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
HLA-DOA-201ENST00000229829 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
HLA-DOA-201ENST00000229829 DHX57Q6P158 1386 aaKnown RBP13.76□□□□□ -0.21
HLA-DOA-201ENST00000229829 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
HLA-DOA-201ENST00000229829 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
HLA-DOA-201ENST00000229829 IGF1RP08069 1367 aa13.72□□□□□ -0.21
HLA-DOA-201ENST00000229829 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
HLA-DOA-201ENST00000229829 ITGAEP38570 1179 aa13.7□□□□□ -0.22
HLA-DOA-201ENST00000229829 BCANQ96GW7 911 aa13.7□□□□□ -0.22
HLA-DOA-201ENST00000229829 MAGI3Q5TCQ9 1506 aa13.69□□□□□ -0.22
HLA-DOA-201ENST00000229829 ABCC10Q5T3U5 1492 aa13.68□□□□□ -0.22
HLA-DOA-201ENST00000229829 RICTORQ6R327 1708 aa13.68□□□□□ -0.22
HLA-DOA-201ENST00000229829 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
HLA-DOA-201ENST00000229829 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
HLA-DOA-201ENST00000229829 FRMPD1Q5SYB0 1578 aa13.67□□□□□ -0.22
HLA-DOA-201ENST00000229829 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
HLA-DOA-201ENST00000229829 RRBP1Q9P2E9 1410 aaKnown RBP13.65□□□□□ -0.22
HLA-DOA-201ENST00000229829 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
HLA-DOA-201ENST00000229829 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
HLA-DOA-201ENST00000229829 MROH2AA6NES4 1674 aa13.61□□□□□ -0.23
HLA-DOA-201ENST00000229829 PLPPR3Q6T4P5 718 aa13.58□□□□□ -0.24
HLA-DOA-201ENST00000229829 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
HLA-DOA-201ENST00000229829 KDM5CP41229 1560 aa13.56□□□□□ -0.24
HLA-DOA-201ENST00000229829 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
HLA-DOA-201ENST00000229829 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
HLA-DOA-201ENST00000229829 ITSN2Q9NZM3 1697 aa13.55□□□□□ -0.24
HLA-DOA-201ENST00000229829 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
HLA-DOA-201ENST00000229829 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
HLA-DOA-201ENST00000229829 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
HLA-DOA-201ENST00000229829 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
HLA-DOA-201ENST00000229829 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
HLA-DOA-201ENST00000229829 CARMIL1Q5VZK9 1371 aa13.53□□□□□ -0.24
HLA-DOA-201ENST00000229829 OSCARQ8IYS5 282 aa13.52□□□□□ -0.24
HLA-DOA-201ENST00000229829 HECW1Q76N89 1606 aa13.52□□□□□ -0.25
HLA-DOA-201ENST00000229829 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
HLA-DOA-201ENST00000229829 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
HLA-DOA-201ENST00000229829 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOA-201ENST00000229829 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
HLA-DOA-201ENST00000229829 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
HLA-DOA-201ENST00000229829 MAST1Q9Y2H9 1570 aa13.5□□□□□ -0.25
HLA-DOA-201ENST00000229829 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
HLA-DOA-201ENST00000229829 MYO5CQ9NQX4 1742 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms