RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 CUL7Q14999 1698 aa17.36■□□□□ 0.37
CDCA3-201ENST00000229265 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
CDCA3-201ENST00000229265 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
CDCA3-201ENST00000229265 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
CDCA3-201ENST00000229265 KIAA0586Q9BVV6 1533 aa17.29■□□□□ 0.36
CDCA3-201ENST00000229265 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
CDCA3-201ENST00000229265 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
CDCA3-201ENST00000229265 DISP1Q96F81 1524 aa17.21■□□□□ 0.34
CDCA3-201ENST00000229265 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
CDCA3-201ENST00000229265 EEA1Q15075 1411 aa17.17■□□□□ 0.34
CDCA3-201ENST00000229265 RAPGEF2Q9Y4G8 1499 aa17.17■□□□□ 0.34
CDCA3-201ENST00000229265 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
CDCA3-201ENST00000229265 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
CDCA3-201ENST00000229265 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
CDCA3-201ENST00000229265 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
CDCA3-201ENST00000229265 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
CDCA3-201ENST00000229265 KIAA0556O60303 1618 aa17.08■□□□□ 0.32
CDCA3-201ENST00000229265 DIP2BQ9P265 1576 aa17.08■□□□□ 0.32
CDCA3-201ENST00000229265 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
CDCA3-201ENST00000229265 PTPRGP23470 1445 aa17.06■□□□□ 0.32
CDCA3-201ENST00000229265 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
CDCA3-201ENST00000229265 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
CDCA3-201ENST00000229265 ABCC10Q5T3U5 1492 aa17.04■□□□□ 0.32
CDCA3-201ENST00000229265 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
CDCA3-201ENST00000229265 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
CDCA3-201ENST00000229265 PLB1Q6P1J6 1458 aa17■□□□□ 0.31
CDCA3-201ENST00000229265 TSPOAP1O95153 1857 aa17■□□□□ 0.31
CDCA3-201ENST00000229265 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
CDCA3-201ENST00000229265 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
CDCA3-201ENST00000229265 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
CDCA3-201ENST00000229265 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
CDCA3-201ENST00000229265 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
CDCA3-201ENST00000229265 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.3
CDCA3-201ENST00000229265 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
CDCA3-201ENST00000229265 ABCA8O94911 1581 aa16.94■□□□□ 0.3
CDCA3-201ENST00000229265 KDM5BQ9UGL1 1544 aa16.93■□□□□ 0.3
CDCA3-201ENST00000229265 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
CDCA3-201ENST00000229265 SAMD9Q5K651 1589 aa16.9■□□□□ 0.3
CDCA3-201ENST00000229265 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
CDCA3-201ENST00000229265 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
CDCA3-201ENST00000229265 ARID3CA6NKF2 412 aa16.87■□□□□ 0.29
CDCA3-201ENST00000229265 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
CDCA3-201ENST00000229265 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDCA3-201ENST00000229265 RANGAP1P46060 587 aaPredicted RBP16.84■□□□□ 0.29
CDCA3-201ENST00000229265 GLI2P10070 1586 aa16.84■□□□□ 0.29
CDCA3-201ENST00000229265 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
CDCA3-201ENST00000229265 KIF21BO75037 1637 aa16.83■□□□□ 0.28
CDCA3-201ENST00000229265 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
CDCA3-201ENST00000229265 ATP10BO94823 1461 aa16.8■□□□□ 0.28
CDCA3-201ENST00000229265 KDM6BO15054 1643 aa16.79■□□□□ 0.28
CDCA3-201ENST00000229265 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
CDCA3-201ENST00000229265 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-201ENST00000229265 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
CDCA3-201ENST00000229265 RAPGEF6Q8TEU7 1601 aa16.74■□□□□ 0.27
CDCA3-201ENST00000229265 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
CDCA3-201ENST00000229265 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
CDCA3-201ENST00000229265 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
CDCA3-201ENST00000229265 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
CDCA3-201ENST00000229265 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
CDCA3-201ENST00000229265 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
CDCA3-201ENST00000229265 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
CDCA3-201ENST00000229265 CFAP43Q8NDM7 1665 aa16.65■□□□□ 0.26
CDCA3-201ENST00000229265 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
CDCA3-201ENST00000229265 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
CDCA3-201ENST00000229265 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
CDCA3-201ENST00000229265 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
CDCA3-201ENST00000229265 MAGI3Q5TCQ9 1506 aa16.61■□□□□ 0.25
CDCA3-201ENST00000229265 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
CDCA3-201ENST00000229265 FRMPD1Q5SYB0 1578 aa16.58■□□□□ 0.24
CDCA3-201ENST00000229265 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
CDCA3-201ENST00000229265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDCA3-201ENST00000229265 TEX14Q8IWB6 1497 aa16.53■□□□□ 0.24
CDCA3-201ENST00000229265 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
CDCA3-201ENST00000229265 KIF14Q15058 1648 aa16.52■□□□□ 0.24
CDCA3-201ENST00000229265 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
CDCA3-201ENST00000229265 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
CDCA3-201ENST00000229265 RAPGEF3O95398 923 aa16.49■□□□□ 0.23
CDCA3-201ENST00000229265 CLIP1P30622 1438 aa16.49■□□□□ 0.23
CDCA3-201ENST00000229265 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
CDCA3-201ENST00000229265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
CDCA3-201ENST00000229265 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
CDCA3-201ENST00000229265 ARAP3Q8WWN8 1544 aa16.48■□□□□ 0.23
CDCA3-201ENST00000229265 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
CDCA3-201ENST00000229265 HECW1Q76N89 1606 aa16.44■□□□□ 0.22
CDCA3-201ENST00000229265 HRCP23327 699 aa16.42■□□□□ 0.22
CDCA3-201ENST00000229265 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
CDCA3-201ENST00000229265 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
CDCA3-201ENST00000229265 FMN1Q68DA7 1419 aa16.39■□□□□ 0.21
CDCA3-201ENST00000229265 APLP2Q06481 763 aa16.39■□□□□ 0.21
CDCA3-201ENST00000229265 NEO1Q92859 1461 aa16.39■□□□□ 0.21
CDCA3-201ENST00000229265 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
CDCA3-201ENST00000229265 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
CDCA3-201ENST00000229265 AKNAQ7Z591 1439 aa16.37■□□□□ 0.21
CDCA3-201ENST00000229265 FANCAO15360 1455 aa16.37■□□□□ 0.21
CDCA3-201ENST00000229265 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
CDCA3-201ENST00000229265 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
CDCA3-201ENST00000229265 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
CDCA3-201ENST00000229265 TROQ12816 1431 aaPredicted RBP16.35■□□□□ 0.21
CDCA3-201ENST00000229265 PLCH2O75038 1416 aa16.34■□□□□ 0.21
CDCA3-201ENST00000229265 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms