RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 FHAD1B1AJZ9 1412 aa20.92■□□□□ 0.94
COPS7A-201ENST00000229251 KIF21BO75037 1637 aa20.92■□□□□ 0.94
COPS7A-201ENST00000229251 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
COPS7A-201ENST00000229251 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
COPS7A-201ENST00000229251 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
COPS7A-201ENST00000229251 GOLGA3Q08378 1498 aa20.88■□□□□ 0.93
COPS7A-201ENST00000229251 FAM69CQ0P6D2 419 aa20.87■□□□□ 0.93
COPS7A-201ENST00000229251 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-201ENST00000229251 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
COPS7A-201ENST00000229251 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
COPS7A-201ENST00000229251 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
COPS7A-201ENST00000229251 DIP2BQ9P265 1576 aa20.84■□□□□ 0.93
COPS7A-201ENST00000229251 KDM6BO15054 1643 aa20.84■□□□□ 0.93
COPS7A-201ENST00000229251 NPM1P06748 294 aaKnown RBP eCLIP20.83■□□□□ 0.92
COPS7A-201ENST00000229251 ILDR1Q86SU0 546 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-201ENST00000229251 KDM4FA0A1W2PPD8 638 aa20.81■□□□□ 0.92
COPS7A-201ENST00000229251 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
COPS7A-201ENST00000229251 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
COPS7A-201ENST00000229251 ADCY10Q96PN6 1610 aa20.73■□□□□ 0.91
COPS7A-201ENST00000229251 TSPOAP1O95153 1857 aa20.72■□□□□ 0.91
COPS7A-201ENST00000229251 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
COPS7A-201ENST00000229251 TRIM26Q12899 539 aaPredicted RBP20.7■□□□□ 0.9
COPS7A-201ENST00000229251 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
COPS7A-201ENST00000229251 PCGF6Q9BYE7 350 aa20.66■□□□□ 0.9
COPS7A-201ENST00000229251 PRXQ9BXM0 1461 aa20.66■□□□□ 0.9
COPS7A-201ENST00000229251 UBTFP17480 764 aaKnown RBP20.62■□□□□ 0.89
COPS7A-201ENST00000229251 RAPGEF2Q9Y4G8 1499 aa20.61■□□□□ 0.89
COPS7A-201ENST00000229251 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
COPS7A-201ENST00000229251 ADGRL1O94910 1474 aa20.55■□□□□ 0.88
COPS7A-201ENST00000229251 PPRC1Q5VV67 1664 aaKnown RBP20.5■□□□□ 0.87
COPS7A-201ENST00000229251 CLIP1P30622 1438 aa20.5■□□□□ 0.87
COPS7A-201ENST00000229251 GLI2P10070 1586 aa20.5■□□□□ 0.87
COPS7A-201ENST00000229251 HECW2Q9P2P5 1572 aa20.49■□□□□ 0.87
COPS7A-201ENST00000229251 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
COPS7A-201ENST00000229251 PTPRGP23470 1445 aa20.47■□□□□ 0.87
COPS7A-201ENST00000229251 ABCC2Q92887 1545 aa20.47■□□□□ 0.87
COPS7A-201ENST00000229251 CUL7Q14999 1698 aa20.45■□□□□ 0.86
COPS7A-201ENST00000229251 ASXL2Q76L83 1435 aa20.44■□□□□ 0.86
COPS7A-201ENST00000229251 IGF1RP08069 1367 aa20.42■□□□□ 0.86
COPS7A-201ENST00000229251 HRCP23327 699 aa20.42■□□□□ 0.86
COPS7A-201ENST00000229251 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
COPS7A-201ENST00000229251 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
COPS7A-201ENST00000229251 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
COPS7A-201ENST00000229251 TEX14Q8IWB6 1497 aa20.37■□□□□ 0.85
COPS7A-201ENST00000229251 MAP3K4Q9Y6R4 1608 aa20.36■□□□□ 0.85
COPS7A-201ENST00000229251 COL17A1Q9UMD9 1497 aaPredicted RBP20.36■□□□□ 0.85
COPS7A-201ENST00000229251 TTBK1Q5TCY1 1321 aaPredicted RBP20.34■□□□□ 0.85
COPS7A-201ENST00000229251 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
COPS7A-201ENST00000229251 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
COPS7A-201ENST00000229251 UACAQ9BZF9 1416 aa20.3■□□□□ 0.84
COPS7A-201ENST00000229251 IQGAP2Q13576 1575 aa20.28■□□□□ 0.84
COPS7A-201ENST00000229251 KDM5BQ9UGL1 1544 aa20.28■□□□□ 0.84
COPS7A-201ENST00000229251 FBXO41Q8TF61 875 aa20.24■□□□□ 0.83
COPS7A-201ENST00000229251 ZCCHC11Q5TAX3 1644 aaKnown RBP20.23■□□□□ 0.83
COPS7A-201ENST00000229251 CTTNBP2Q8WZ74 1663 aa20.23■□□□□ 0.83
COPS7A-201ENST00000229251 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
COPS7A-201ENST00000229251 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
COPS7A-201ENST00000229251 EFCAB5A4FU69 1503 aa20.16■□□□□ 0.82
COPS7A-201ENST00000229251 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
COPS7A-201ENST00000229251 APLP2Q06481 763 aa20.14■□□□□ 0.81
COPS7A-201ENST00000229251 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.81
COPS7A-201ENST00000229251 CFAP43Q8NDM7 1665 aa20.14■□□□□ 0.81
COPS7A-201ENST00000229251 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
COPS7A-201ENST00000229251 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
COPS7A-201ENST00000229251 ZEB1P37275 1124 aaPredicted RBP20.11■□□□□ 0.81
COPS7A-201ENST00000229251 KIAA0556O60303 1618 aa20.1■□□□□ 0.81
COPS7A-201ENST00000229251 MAP3K1Q13233 1512 aa20.1■□□□□ 0.81
COPS7A-201ENST00000229251 CD109Q6YHK3 1445 aa20.09■□□□□ 0.81
COPS7A-201ENST00000229251 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
COPS7A-201ENST00000229251 SAMD9Q5K651 1589 aa20■□□□□ 0.79
COPS7A-201ENST00000229251 ADAMTSL3P82987 1691 aa19.99■□□□□ 0.79
COPS7A-201ENST00000229251 PTPRMP28827 1452 aa19.99■□□□□ 0.79
COPS7A-201ENST00000229251 ARAP3Q8WWN8 1544 aa19.98■□□□□ 0.79
COPS7A-201ENST00000229251 TIAM1Q13009 1591 aa19.97■□□□□ 0.79
COPS7A-201ENST00000229251 KCNH8Q96L42 1107 aa19.97■□□□□ 0.79
COPS7A-201ENST00000229251 ABCA8O94911 1581 aa19.95■□□□□ 0.78
COPS7A-201ENST00000229251 FYCO1Q9BQS8 1478 aa19.95■□□□□ 0.78
COPS7A-201ENST00000229251 PCF11O94913 1555 aaKnown RBP19.93■□□□□ 0.78
COPS7A-201ENST00000229251 FMN1Q68DA7 1419 aa19.92■□□□□ 0.78
COPS7A-201ENST00000229251 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
COPS7A-201ENST00000229251 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.78
COPS7A-201ENST00000229251 LMTK3Q96Q04 1460 aa19.89■□□□□ 0.77
COPS7A-201ENST00000229251 BCORL1Q5H9F3 1711 aa19.89■□□□□ 0.77
COPS7A-201ENST00000229251 RRBP1Q9P2E9 1410 aaKnown RBP19.87■□□□□ 0.77
COPS7A-201ENST00000229251 FHOD3Q2V2M9 1422 aa19.87■□□□□ 0.77
COPS7A-201ENST00000229251 MADDQ8WXG6 1647 aa19.85■□□□□ 0.77
COPS7A-201ENST00000229251 ABCA9Q8IUA7 1624 aa19.84■□□□□ 0.77
COPS7A-201ENST00000229251 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
COPS7A-201ENST00000229251 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
COPS7A-201ENST00000229251 NEO1Q92859 1461 aa19.81■□□□□ 0.76
COPS7A-201ENST00000229251 ARID4BQ4LE39 1312 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-201ENST00000229251 RAPGEF3O95398 923 aa19.77■□□□□ 0.76
COPS7A-201ENST00000229251 RIMS1Q86UR5 1692 aaKnown RBP19.77■□□□□ 0.76
COPS7A-201ENST00000229251 FRMPD1Q5SYB0 1578 aa19.76■□□□□ 0.75
COPS7A-201ENST00000229251 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-201ENST00000229251 ATP10BO94823 1461 aa19.76■□□□□ 0.75
COPS7A-201ENST00000229251 CCNB3Q8WWL7 1395 aa19.73■□□□□ 0.75
COPS7A-201ENST00000229251 ARHGEF40Q8TER5 1519 aa19.73■□□□□ 0.75
COPS7A-201ENST00000229251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
COPS7A-201ENST00000229251 CERKQ8TCT0 537 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms