RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.89□□□□□ -1.31
KRR1-201ENST00000229214 HNRNPUL2Q1KMD3 747 aaKnown RBP6.89□□□□□ -1.31
KRR1-201ENST00000229214 NGEFQ8N5V2 710 aa6.89□□□□□ -1.31
KRR1-201ENST00000229214 HDGFP51858 240 aaKnown RBP6.89□□□□□ -1.31
KRR1-201ENST00000229214 PRKCSHP14314 528 aaPredicted RBP6.88□□□□□ -1.31
KRR1-201ENST00000229214 LAS1LQ9Y4W2 734 aaKnown RBP6.87□□□□□ -1.31
KRR1-201ENST00000229214 HTATSF1O43719 755 aaKnown RBP6.87□□□□□ -1.31
KRR1-201ENST00000229214 FHAD1B1AJZ9 1412 aa6.87□□□□□ -1.31
KRR1-201ENST00000229214 NPM1P06748 294 aaKnown RBP eCLIP6.87□□□□□ -1.31
KRR1-201ENST00000229214 HRCP23327 699 aa6.87□□□□□ -1.31
KRR1-201ENST00000229214 DHX8Q14562 1220 aaKnown RBP6.87□□□□□ -1.31
KRR1-201ENST00000229214 DIEXFQ68CQ4 756 aaKnown RBP6.87□□□□□ -1.31
KRR1-201ENST00000229214 PHLDB1Q86UU1 1377 aa6.85□□□□□ -1.31
KRR1-201ENST00000229214 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
KRR1-201ENST00000229214 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.31
KRR1-201ENST00000229214 TONSLQ96HA7 1378 aa6.84□□□□□ -1.31
KRR1-201ENST00000229214 E9PSI1 815 aa6.84□□□□□ -1.31
KRR1-201ENST00000229214 KIF3AQ9Y496 699 aa6.84□□□□□ -1.31
KRR1-201ENST00000229214 EIF3DO15371 548 aaKnown RBP eCLIP6.84□□□□□ -1.32
KRR1-201ENST00000229214 CALD1Q05682 793 aaKnown RBP6.83□□□□□ -1.32
KRR1-201ENST00000229214 PDIA4P13667 645 aaKnown RBP6.83□□□□□ -1.32
KRR1-201ENST00000229214 BAZ1AQ9NRL2 1556 aaPredicted RBP6.83□□□□□ -1.32
KRR1-201ENST00000229214 NAP1L2Q9ULW6 460 aaPredicted RBP6.83□□□□□ -1.32
KRR1-201ENST00000229214 PPM1GO15355 546 aaPredicted RBP6.82□□□□□ -1.32
KRR1-201ENST00000229214 CALRP27797 417 aaKnown RBP6.82□□□□□ -1.32
KRR1-201ENST00000229214 STAC3Q96MF2 364 aa6.82□□□□□ -1.32
KRR1-201ENST00000229214 AAMPQ13685 434 aa6.81□□□□□ -1.32
KRR1-201ENST00000229214 DHX37Q8IY37 1157 aaKnown RBP6.81□□□□□ -1.32
KRR1-201ENST00000229214 CFAP53Q96M91 514 aa6.8□□□□□ -1.32
KRR1-201ENST00000229214 SYAP1Q96A49 352 aaPredicted RBP6.79□□□□□ -1.32
KRR1-201ENST00000229214 CLIP1P30622 1438 aa6.79□□□□□ -1.32
KRR1-201ENST00000229214 PLPPR3Q6T4P5 718 aa6.79□□□□□ -1.32
KRR1-201ENST00000229214 KIAA2012Q0VF49 1180 aa6.79□□□□□ -1.32
KRR1-201ENST00000229214 CSPP1Q1MSJ5 1256 aa6.78□□□□□ -1.32
KRR1-201ENST00000229214 SCAPERQ9BY12 1400 aa6.78□□□□□ -1.32
KRR1-201ENST00000229214 GOLGA6L4A6NEF3 574 aa6.78□□□□□ -1.32
KRR1-201ENST00000229214 TSPY4P0CV99 314 aa6.78□□□□□ -1.32
KRR1-201ENST00000229214 TSPY10P0CW01 314 aa6.78□□□□□ -1.32
KRR1-201ENST00000229214 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
KRR1-201ENST00000229214 CAGE1Q8TC20 777 aa6.77□□□□□ -1.33
KRR1-201ENST00000229214 FAM50AQ14320 339 aaKnown RBP6.77□□□□□ -1.33
KRR1-201ENST00000229214 IRX6P78412 446 aaPredicted RBP6.76□□□□□ -1.33
KRR1-201ENST00000229214 PHF14O94880 888 aa6.76□□□□□ -1.33
KRR1-201ENST00000229214 RSPH4AQ5TD94 716 aa6.76□□□□□ -1.33
KRR1-201ENST00000229214 MCCP23508 829 aa6.75□□□□□ -1.33
KRR1-201ENST00000229214 MTERF4Q7Z6M4 381 aaKnown RBP6.75□□□□□ -1.33
KRR1-201ENST00000229214 SLC4A1APQ9BWU0 796 aaKnown RBP6.75□□□□□ -1.33
KRR1-201ENST00000229214 WASHC2AQ641Q2 1341 aa6.75□□□□□ -1.33
KRR1-201ENST00000229214 SETD5Q9C0A6 1442 aa6.75□□□□□ -1.33
KRR1-201ENST00000229214 ABCC8Q09428 1581 aa6.74□□□□□ -1.33
KRR1-201ENST00000229214 ROCK2O75116 1388 aaKnown RBP6.74□□□□□ -1.33
KRR1-201ENST00000229214 WDR43Q15061 677 aaKnown RBP eCLIP6.73□□□□□ -1.33
KRR1-201ENST00000229214 NUDCQ9Y266 331 aa6.73□□□□□ -1.33
KRR1-201ENST00000229214 RDXP35241 583 aaKnown RBP6.73□□□□□ -1.33
KRR1-201ENST00000229214 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
KRR1-201ENST00000229214 EIF3AQ14152 1382 aaKnown RBP6.72□□□□□ -1.33
KRR1-201ENST00000229214 ZNF326Q5BKZ1 582 aaKnown RBP6.72□□□□□ -1.33
KRR1-201ENST00000229214 GOLGA3Q08378 1498 aa6.72□□□□□ -1.33
KRR1-201ENST00000229214 ZCCHC6Q5VYS8 1495 aaKnown RBP6.72□□□□□ -1.33
KRR1-201ENST00000229214 TPM4P67936 248 aa6.71□□□□□ -1.33
KRR1-201ENST00000229214 SMARCA2P51531 1590 aa6.71□□□□□ -1.33
KRR1-201ENST00000229214 KANK1Q14678 1352 aa6.71□□□□□ -1.34
KRR1-201ENST00000229214 GOLGA6L3A6NEY3 463 aa6.71□□□□□ -1.34
KRR1-201ENST00000229214 HMMRO75330 724 aa6.71□□□□□ -1.34
KRR1-201ENST00000229214 GPS2Q13227 327 aa6.71□□□□□ -1.34
KRR1-201ENST00000229214 TMC1Q8TDI8 760 aa6.7□□□□□ -1.34
KRR1-201ENST00000229214 FOXD1Q16676 465 aa6.7□□□□□ -1.34
KRR1-201ENST00000229214 CEP164Q9UPV0 1460 aa6.7□□□□□ -1.34
KRR1-201ENST00000229214 TRIM52Q96A61 297 aa6.7□□□□□ -1.34
KRR1-201ENST00000229214 CDR1P51861 262 aa6.69□□□□□ -1.34
KRR1-201ENST00000229214 CCDC70Q6NSX1 233 aa6.69□□□□□ -1.34
KRR1-201ENST00000229214 UACAQ9BZF9 1416 aa6.69□□□□□ -1.34
KRR1-201ENST00000229214 CNGB1Q14028 1251 aaPredicted RBP6.69□□□□□ -1.34
KRR1-201ENST00000229214 PLEKHG5O94827 1062 aa6.68□□□□□ -1.34
KRR1-201ENST00000229214 HSP90B1P14625 803 aaKnown RBP6.68□□□□□ -1.34
KRR1-201ENST00000229214 MTUS2Q5JR59 1369 aa6.68□□□□□ -1.34
KRR1-201ENST00000229214 FEZ1Q99689 392 aa6.68□□□□□ -1.34
KRR1-201ENST00000229214 STAG3Q9UJ98 1225 aa6.67□□□□□ -1.34
KRR1-201ENST00000229214 IPO8O15397 1037 aaKnown RBP6.67□□□□□ -1.34
KRR1-201ENST00000229214 BCANQ96GW7 911 aa6.67□□□□□ -1.34
KRR1-201ENST00000229214 KIF27Q86VH2 1401 aa6.67□□□□□ -1.34
KRR1-201ENST00000229214 GON4LQ3T8J9 2241 aa6.67□□□□□ -1.34
KRR1-201ENST00000229214 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
KRR1-201ENST00000229214 TXLNBQ8N3L3 684 aa6.67□□□□□ -1.34
KRR1-201ENST00000229214 TPM3P06753 285 aa6.67□□□□□ -1.34
KRR1-201ENST00000229214 TMX4Q9H1E5 349 aaPredicted RBP6.67□□□□□ -1.34
KRR1-201ENST00000229214 KIF16BQ96L93 1317 aa6.66□□□□□ -1.34
KRR1-201ENST00000229214 KTN1Q86UP2 1357 aaKnown RBP6.66□□□□□ -1.34
KRR1-201ENST00000229214 ISY1Q9ULR0 285 aaKnown RBP6.66□□□□□ -1.34
KRR1-201ENST00000229214 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
KRR1-201ENST00000229214 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.65□□□□□ -1.34
KRR1-201ENST00000229214 SMC4Q9NTJ3 1288 aa6.65□□□□□ -1.35
KRR1-201ENST00000229214 CAVIN1Q6NZI2 390 aaKnown RBP6.65□□□□□ -1.35
KRR1-201ENST00000229214 MSNP26038 577 aaKnown RBP6.64□□□□□ -1.35
KRR1-201ENST00000229214 FMN1Q68DA7 1419 aa6.64□□□□□ -1.35
KRR1-201ENST00000229214 MYO6Q9UM54 1294 aa6.64□□□□□ -1.35
KRR1-201ENST00000229214 DEF6Q9H4E7 631 aa6.64□□□□□ -1.35
KRR1-201ENST00000229214 GBP4Q96PP9 640 aa6.63□□□□□ -1.35
KRR1-201ENST00000229214 GPATCH3Q96I76 525 aa6.63□□□□□ -1.35
KRR1-201ENST00000229214 MAP7D2Q96T17 732 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms