RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 DAXXQ9UER7 740 aaPredicted RBP19.96■□□□□ 0.79
PRDM4-201ENST00000228437 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
PRDM4-201ENST00000228437 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
PRDM4-201ENST00000228437 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.91■□□□□ 0.78
PRDM4-201ENST00000228437 PPP4R2Q9NY27 417 aa19.89■□□□□ 0.77
PRDM4-201ENST00000228437 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
PRDM4-201ENST00000228437 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
PRDM4-201ENST00000228437 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
PRDM4-201ENST00000228437 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
PRDM4-201ENST00000228437 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
PRDM4-201ENST00000228437 CHIC2Q9UKJ5 165 aa19.86■□□□□ 0.77
PRDM4-201ENST00000228437 ANO8Q9HCE9 1232 aaPredicted RBP19.83■□□□□ 0.77
PRDM4-201ENST00000228437 CCER2I3L3R5 266 aa19.83■□□□□ 0.76
PRDM4-201ENST00000228437 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
PRDM4-201ENST00000228437 RAPGEF2Q9Y4G8 1499 aa19.82■□□□□ 0.76
PRDM4-201ENST00000228437 PRKCSHP14314 528 aaPredicted RBP19.8■□□□□ 0.76
PRDM4-201ENST00000228437 FANCIQ9NVI1 1328 aa19.74■□□□□ 0.75
PRDM4-201ENST00000228437 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
PRDM4-201ENST00000228437 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
PRDM4-201ENST00000228437 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
PRDM4-201ENST00000228437 NEFMP07197 916 aa19.71■□□□□ 0.75
PRDM4-201ENST00000228437 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
PRDM4-201ENST00000228437 ARXQ96QS3 562 aa19.68■□□□□ 0.74
PRDM4-201ENST00000228437 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.74
PRDM4-201ENST00000228437 SETD5Q9C0A6 1442 aa19.66■□□□□ 0.74
PRDM4-201ENST00000228437 HSPA5P11021 654 aaKnown RBP19.64■□□□□ 0.73
PRDM4-201ENST00000228437 IL27Q8NEV9 243 aa19.62■□□□□ 0.73
PRDM4-201ENST00000228437 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
PRDM4-201ENST00000228437 FOXD1Q16676 465 aa19.58■□□□□ 0.73
PRDM4-201ENST00000228437 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
PRDM4-201ENST00000228437 IPO9Q96P70 1041 aaKnown RBP19.54■□□□□ 0.72
PRDM4-201ENST00000228437 KIF21BO75037 1637 aa19.54■□□□□ 0.72
PRDM4-201ENST00000228437 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
PRDM4-201ENST00000228437 WDR97A6NE52 1622 aa19.48■□□□□ 0.71
PRDM4-201ENST00000228437 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
PRDM4-201ENST00000228437 NACADO15069 1562 aa19.46■□□□□ 0.71
PRDM4-201ENST00000228437 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
PRDM4-201ENST00000228437 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
PRDM4-201ENST00000228437 SLC4A3P48751 1232 aa19.44■□□□□ 0.7
PRDM4-201ENST00000228437 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
PRDM4-201ENST00000228437 ERICH6BQ5W0A0 696 aa19.41■□□□□ 0.7
PRDM4-201ENST00000228437 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
PRDM4-201ENST00000228437 PRKRIP1Q9H875 184 aaPredicted RBP19.39■□□□□ 0.69
PRDM4-201ENST00000228437 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
PRDM4-201ENST00000228437 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
PRDM4-201ENST00000228437 WASHC2AQ641Q2 1341 aa19.37■□□□□ 0.69
PRDM4-201ENST00000228437 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
PRDM4-201ENST00000228437 PHLDB1Q86UU1 1377 aa19.35■□□□□ 0.69
PRDM4-201ENST00000228437 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
PRDM4-201ENST00000228437 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
PRDM4-201ENST00000228437 RGS3P49796 1198 aa19.33■□□□□ 0.68
PRDM4-201ENST00000228437 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
PRDM4-201ENST00000228437 BRPF3Q9ULD4 1205 aa19.32■□□□□ 0.68
PRDM4-201ENST00000228437 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
PRDM4-201ENST00000228437 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
PRDM4-201ENST00000228437 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
PRDM4-201ENST00000228437 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
PRDM4-201ENST00000228437 ZBED9Q6R2W3 1325 aa19.28■□□□□ 0.68
PRDM4-201ENST00000228437 PDE4AP27815 886 aa19.27■□□□□ 0.68
PRDM4-201ENST00000228437 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
PRDM4-201ENST00000228437 PLIN1O60240 522 aa19.27■□□□□ 0.67
PRDM4-201ENST00000228437 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
PRDM4-201ENST00000228437 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
PRDM4-201ENST00000228437 DDRGK1Q96HY6 314 aa19.22■□□□□ 0.67
PRDM4-201ENST00000228437 CUX2O14529 1486 aa19.21■□□□□ 0.67
PRDM4-201ENST00000228437 ARHGAP35Q9NRY4 1499 aa19.21■□□□□ 0.67
PRDM4-201ENST00000228437 CANXP27824 592 aaKnown RBP19.21■□□□□ 0.67
PRDM4-201ENST00000228437 C11orf95C9JLR9 678 aaPredicted RBP19.2■□□□□ 0.66
PRDM4-201ENST00000228437 RCAN3Q9UKA8 241 aa19.2■□□□□ 0.66
PRDM4-201ENST00000228437 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
PRDM4-201ENST00000228437 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
PRDM4-201ENST00000228437 FHOD3Q2V2M9 1422 aa19.18■□□□□ 0.66
PRDM4-201ENST00000228437 TCERG1O14776 1098 aaKnown RBP19.17■□□□□ 0.66
PRDM4-201ENST00000228437 CC2D1BQ5T0F9 858 aaKnown RBP19.16■□□□□ 0.66
PRDM4-201ENST00000228437 GSE1Q14687 1217 aa19.15■□□□□ 0.66
PRDM4-201ENST00000228437 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
PRDM4-201ENST00000228437 MAPKBP1O60336 1514 aa19.15■□□□□ 0.66
PRDM4-201ENST00000228437 NAP1L5Q96NT1 182 aaPredicted RBP19.13■□□□□ 0.65
PRDM4-201ENST00000228437 SPRYD3Q8NCJ5 442 aa19.13■□□□□ 0.65
PRDM4-201ENST00000228437 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
PRDM4-201ENST00000228437 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
PRDM4-201ENST00000228437 SLKQ9H2G2 1235 aaPredicted RBP19.12■□□□□ 0.65
PRDM4-201ENST00000228437 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
PRDM4-201ENST00000228437 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
PRDM4-201ENST00000228437 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
PRDM4-201ENST00000228437 FBLN2P98095 1184 aa19.1■□□□□ 0.65
PRDM4-201ENST00000228437 FRAT1Q92837 279 aaPredicted RBP19.09■□□□□ 0.65
PRDM4-201ENST00000228437 RRP1P56182 461 aaKnown RBP19.08■□□□□ 0.65
PRDM4-201ENST00000228437 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
PRDM4-201ENST00000228437 NFKBIBQ15653 356 aa19.08■□□□□ 0.65
PRDM4-201ENST00000228437 GLIPR1L2Q4G1C9 344 aa19.06■□□□□ 0.64
PRDM4-201ENST00000228437 GZF1Q9H116 711 aaPredicted RBP19.06■□□□□ 0.64
PRDM4-201ENST00000228437 LRRC9Q6ZRR7 1453 aa19.06■□□□□ 0.64
PRDM4-201ENST00000228437 CNTLNQ9NXG0 1405 aa19.05■□□□□ 0.64
PRDM4-201ENST00000228437 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
PRDM4-201ENST00000228437 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
PRDM4-201ENST00000228437 CRBNQ96SW2 442 aa19.04■□□□□ 0.64
PRDM4-201ENST00000228437 FMN1Q68DA7 1419 aa19.03■□□□□ 0.64
PRDM4-201ENST00000228437 CDCA7LQ96GN5 454 aa19.03■□□□□ 0.64
PRDM4-201ENST00000228437 PRXQ9BXM0 1461 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms