RNA–Protein interactions for RNA: ENST00000226951.10

CLNK-201, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLNK, Length 5,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-201ENST00000226951 ARXQ96QS3 562 aa12.95□□□□□ -0.34
CLNK-201ENST00000226951 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLNK-201ENST00000226951 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
CLNK-201ENST00000226951 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
CLNK-201ENST00000226951 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
CLNK-201ENST00000226951 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
CLNK-201ENST00000226951 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
CLNK-201ENST00000226951 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
CLNK-201ENST00000226951 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
CLNK-201ENST00000226951 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
CLNK-201ENST00000226951 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
CLNK-201ENST00000226951 ABCC9O60706 1549 aa12.82□□□□□ -0.36
CLNK-201ENST00000226951 RSF1Q96T23 1441 aaPredicted RBP12.82□□□□□ -0.36
CLNK-201ENST00000226951 PTMSP20962 102 aa12.81□□□□□ -0.36
CLNK-201ENST00000226951 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
CLNK-201ENST00000226951 CDK11BP21127 795 aaKnown RBP12.79□□□□□ -0.36
CLNK-201ENST00000226951 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
CLNK-201ENST00000226951 DNTTIP2Q5QJE6 756 aaKnown RBP12.78□□□□□ -0.36
CLNK-201ENST00000226951 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.36
CLNK-201ENST00000226951 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.37
CLNK-201ENST00000226951 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.37
CLNK-201ENST00000226951 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
CLNK-201ENST00000226951 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
CLNK-201ENST00000226951 MSNP26038 577 aaKnown RBP12.76□□□□□ -0.37
CLNK-201ENST00000226951 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
CLNK-201ENST00000226951 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
CLNK-201ENST00000226951 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
CLNK-201ENST00000226951 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
CLNK-201ENST00000226951 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLNK-201ENST00000226951 CHAF1AQ13111 956 aaPredicted RBP12.7□□□□□ -0.38
CLNK-201ENST00000226951 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
CLNK-201ENST00000226951 HSCBQ8IWL3 235 aa12.69□□□□□ -0.38
CLNK-201ENST00000226951 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
CLNK-201ENST00000226951 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
CLNK-201ENST00000226951 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
CLNK-201ENST00000226951 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
CLNK-201ENST00000226951 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
CLNK-201ENST00000226951 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
CLNK-201ENST00000226951 MS4A1P11836 297 aa12.67□□□□□ -0.38
CLNK-201ENST00000226951 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
CLNK-201ENST00000226951 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
CLNK-201ENST00000226951 CHMP4BQ9H444 224 aaKnown RBP12.66□□□□□ -0.38
CLNK-201ENST00000226951 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
CLNK-201ENST00000226951 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
CLNK-201ENST00000226951 VPS8Q8N3P4 1428 aa12.64□□□□□ -0.39
CLNK-201ENST00000226951 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
CLNK-201ENST00000226951 RGS3P49796 1198 aa12.62□□□□□ -0.39
CLNK-201ENST00000226951 FTSJ3Q8IY81 847 aaKnown RBP12.62□□□□□ -0.39
CLNK-201ENST00000226951 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
CLNK-201ENST00000226951 ARID3CA6NKF2 412 aa12.61□□□□□ -0.39
CLNK-201ENST00000226951 KDM2AQ9Y2K7 1162 aa12.61□□□□□ -0.39
CLNK-201ENST00000226951 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
CLNK-201ENST00000226951 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
CLNK-201ENST00000226951 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
CLNK-201ENST00000226951 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
CLNK-201ENST00000226951 RRP7BPQ9NSQ0 103 aa12.59□□□□□ -0.39
CLNK-201ENST00000226951 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
CLNK-201ENST00000226951 ZRSR1Q15695 479 aaKnown RBP12.59□□□□□ -0.39
CLNK-201ENST00000226951 KIF27Q86VH2 1401 aa12.58□□□□□ -0.39
CLNK-201ENST00000226951 ARID4BQ4LE39 1312 aaPredicted RBP12.57□□□□□ -0.4
CLNK-201ENST00000226951 NUDCQ9Y266 331 aa12.57□□□□□ -0.4
CLNK-201ENST00000226951 GSE1Q14687 1217 aa12.57□□□□□ -0.4
CLNK-201ENST00000226951 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
CLNK-201ENST00000226951 NRDCO43847 1150 aa12.55□□□□□ -0.4
CLNK-201ENST00000226951 TSPY4P0CV99 314 aa12.55□□□□□ -0.4
CLNK-201ENST00000226951 TSPY10P0CW01 314 aa12.55□□□□□ -0.4
CLNK-201ENST00000226951 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
CLNK-201ENST00000226951 HSPA5P11021 654 aaKnown RBP12.54□□□□□ -0.4
CLNK-201ENST00000226951 RCAN3Q9UKA8 241 aa12.53□□□□□ -0.4
CLNK-201ENST00000226951 BAZ1AQ9NRL2 1556 aaPredicted RBP12.53□□□□□ -0.4
CLNK-201ENST00000226951 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.4
CLNK-201ENST00000226951 NACADO15069 1562 aa12.52□□□□□ -0.41
CLNK-201ENST00000226951 RALBP1Q15311 655 aa12.52□□□□□ -0.41
CLNK-201ENST00000226951 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
CLNK-201ENST00000226951 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
CLNK-201ENST00000226951 FBLN2P98095 1184 aa12.49□□□□□ -0.41
CLNK-201ENST00000226951 RAB3GAP2Q9H2M9 1393 aa12.49□□□□□ -0.41
CLNK-201ENST00000226951 SYAP1Q96A49 352 aaPredicted RBP12.49□□□□□ -0.41
CLNK-201ENST00000226951 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
CLNK-201ENST00000226951 MCCP23508 829 aa12.48□□□□□ -0.41
CLNK-201ENST00000226951 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
CLNK-201ENST00000226951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLNK-201ENST00000226951 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
CLNK-201ENST00000226951 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
CLNK-201ENST00000226951 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
CLNK-201ENST00000226951 FRAT1Q92837 279 aaPredicted RBP12.47□□□□□ -0.41
CLNK-201ENST00000226951 SOGA1O94964 1423 aa12.46□□□□□ -0.41
CLNK-201ENST00000226951 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.42
CLNK-201ENST00000226951 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
CLNK-201ENST00000226951 PHLDB1Q86UU1 1377 aa12.45□□□□□ -0.42
CLNK-201ENST00000226951 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
CLNK-201ENST00000226951 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
CLNK-201ENST00000226951 SKOR2Q2VWA4 1001 aaPredicted RBP12.45□□□□□ -0.42
CLNK-201ENST00000226951 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
CLNK-201ENST00000226951 TMF1P82094 1093 aa12.44□□□□□ -0.42
CLNK-201ENST00000226951 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
CLNK-201ENST00000226951 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
CLNK-201ENST00000226951 CC2D1BQ5T0F9 858 aaKnown RBP12.44□□□□□ -0.42
CLNK-201ENST00000226951 DRC7Q8IY82 874 aa12.44□□□□□ -0.42
CLNK-201ENST00000226951 PDE4AP27815 886 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms