RNA–Protein interactions for RNA: ENST00000225873.8

PEX12-201, Transcript of peroxisomal biogenesis factor 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX12, Length 2,675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX12-201ENST00000225873 ITGAEP38570 1179 aa16.39■□□□□ 0.21
PEX12-201ENST00000225873 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
PEX12-201ENST00000225873 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
PEX12-201ENST00000225873 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
PEX12-201ENST00000225873 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
PEX12-201ENST00000225873 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.2
PEX12-201ENST00000225873 WASHC2CQ9Y4E1 1318 aa16.32■□□□□ 0.2
PEX12-201ENST00000225873 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
PEX12-201ENST00000225873 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
PEX12-201ENST00000225873 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
PEX12-201ENST00000225873 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.19
PEX12-201ENST00000225873 SOGA1O94964 1423 aa16.21■□□□□ 0.19
PEX12-201ENST00000225873 BRPF3Q9ULD4 1205 aa16.21■□□□□ 0.18
PEX12-201ENST00000225873 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
PEX12-201ENST00000225873 CEP162Q5TB80 1403 aa16.17■□□□□ 0.18
PEX12-201ENST00000225873 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
PEX12-201ENST00000225873 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
PEX12-201ENST00000225873 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
PEX12-201ENST00000225873 EEA1Q15075 1411 aa16.15■□□□□ 0.18
PEX12-201ENST00000225873 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
PEX12-201ENST00000225873 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
PEX12-201ENST00000225873 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
PEX12-201ENST00000225873 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
PEX12-201ENST00000225873 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
PEX12-201ENST00000225873 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
PEX12-201ENST00000225873 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
PEX12-201ENST00000225873 RSPH4AQ5TD94 716 aa16.1■□□□□ 0.17
PEX12-201ENST00000225873 NEFMP07197 916 aa16.05■□□□□ 0.16
PEX12-201ENST00000225873 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
PEX12-201ENST00000225873 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
PEX12-201ENST00000225873 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
PEX12-201ENST00000225873 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
PEX12-201ENST00000225873 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
PEX12-201ENST00000225873 PRDM4Q9UKN5 801 aa16.03■□□□□ 0.16
PEX12-201ENST00000225873 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
PEX12-201ENST00000225873 KCNH8Q96L42 1107 aa16■□□□□ 0.15
PEX12-201ENST00000225873 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
PEX12-201ENST00000225873 SYNJ1O43426 1573 aa15.99■□□□□ 0.15
PEX12-201ENST00000225873 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.15
PEX12-201ENST00000225873 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
PEX12-201ENST00000225873 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
PEX12-201ENST00000225873 NAP1L5Q96NT1 182 aaPredicted RBP15.95■□□□□ 0.14
PEX12-201ENST00000225873 GSE1Q14687 1217 aa15.94■□□□□ 0.14
PEX12-201ENST00000225873 HSP90AA1P07900 732 aaKnown RBP15.93■□□□□ 0.14
PEX12-201ENST00000225873 ANP32AP39687 249 aaKnown RBP15.93■□□□□ 0.14
PEX12-201ENST00000225873 BBXQ8WY36 941 aaPredicted RBP15.93■□□□□ 0.14
PEX12-201ENST00000225873 KIF21BO75037 1637 aa15.91■□□□□ 0.14
PEX12-201ENST00000225873 GTF2E1P29083 439 aaPredicted RBP15.91■□□□□ 0.14
PEX12-201ENST00000225873 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
PEX12-201ENST00000225873 CHMP4BQ9H444 224 aaKnown RBP15.9■□□□□ 0.14
PEX12-201ENST00000225873 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
PEX12-201ENST00000225873 DHX37Q8IY37 1157 aaKnown RBP15.9■□□□□ 0.14
PEX12-201ENST00000225873 CHMP4AQ9BY43 222 aa15.9■□□□□ 0.14
PEX12-201ENST00000225873 CLIP1P30622 1438 aa15.87■□□□□ 0.13
PEX12-201ENST00000225873 RGS3P49796 1198 aa15.86■□□□□ 0.13
PEX12-201ENST00000225873 PPP4R2Q9NY27 417 aa15.85■□□□□ 0.13
PEX12-201ENST00000225873 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
PEX12-201ENST00000225873 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
PEX12-201ENST00000225873 HOMEZQ8IX15 550 aa15.82■□□□□ 0.12
PEX12-201ENST00000225873 RAPGEF2Q9Y4G8 1499 aa15.82■□□□□ 0.12
PEX12-201ENST00000225873 NESP48681 1621 aa15.82■□□□□ 0.12
PEX12-201ENST00000225873 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
PEX12-201ENST00000225873 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
PEX12-201ENST00000225873 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
PEX12-201ENST00000225873 RRAGDQ9NQL2 400 aaPredicted RBP15.78■□□□□ 0.12
PEX12-201ENST00000225873 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.12
PEX12-201ENST00000225873 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.11
PEX12-201ENST00000225873 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
PEX12-201ENST00000225873 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
PEX12-201ENST00000225873 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
PEX12-201ENST00000225873 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
PEX12-201ENST00000225873 PDCL3Q9H2J4 239 aa15.74■□□□□ 0.11
PEX12-201ENST00000225873 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
PEX12-201ENST00000225873 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
PEX12-201ENST00000225873 IRX6P78412 446 aaPredicted RBP15.71■□□□□ 0.11
PEX12-201ENST00000225873 CFTRP13569 1480 aa15.71■□□□□ 0.11
PEX12-201ENST00000225873 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
PEX12-201ENST00000225873 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
PEX12-201ENST00000225873 ZFP91Q96JP5 570 aaPredicted RBP15.7■□□□□ 0.1
PEX12-201ENST00000225873 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
PEX12-201ENST00000225873 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
PEX12-201ENST00000225873 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
PEX12-201ENST00000225873 FTSJ3Q8IY81 847 aaKnown RBP15.67■□□□□ 0.1
PEX12-201ENST00000225873 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
PEX12-201ENST00000225873 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
PEX12-201ENST00000225873 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
PEX12-201ENST00000225873 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
PEX12-201ENST00000225873 CUX1P39880 1505 aa15.63■□□□□ 0.09
PEX12-201ENST00000225873 CLCN1P35523 988 aa15.63■□□□□ 0.09
PEX12-201ENST00000225873 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
PEX12-201ENST00000225873 FOXD1Q16676 465 aa15.62■□□□□ 0.09
PEX12-201ENST00000225873 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
PEX12-201ENST00000225873 NCLP19338 710 aaKnown RBP15.61■□□□□ 0.09
PEX12-201ENST00000225873 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
PEX12-201ENST00000225873 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
PEX12-201ENST00000225873 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
PEX12-201ENST00000225873 NPM2Q86SE8 214 aaKnown RBP15.6■□□□□ 0.09
PEX12-201ENST00000225873 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
PEX12-201ENST00000225873 SECISBP2LQ93073 1101 aaKnown RBP15.59■□□□□ 0.09
PEX12-201ENST00000225873 ARAP1Q96P48 1450 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms