RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 CUX1P39880 1505 aa12.99□□□□□ -0.33
CCL13-201ENST00000225844 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
CCL13-201ENST00000225844 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
CCL13-201ENST00000225844 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
CCL13-201ENST00000225844 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
CCL13-201ENST00000225844 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
CCL13-201ENST00000225844 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
CCL13-201ENST00000225844 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
CCL13-201ENST00000225844 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
CCL13-201ENST00000225844 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
CCL13-201ENST00000225844 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
CCL13-201ENST00000225844 NUP160Q12769 1436 aa12.86□□□□□ -0.35
CCL13-201ENST00000225844 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
CCL13-201ENST00000225844 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCL13-201ENST00000225844 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
CCL13-201ENST00000225844 BIVM-ERCC5R4GMW8 1640 aa12.82□□□□□ -0.36
CCL13-201ENST00000225844 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
CCL13-201ENST00000225844 FHAD1B1AJZ9 1412 aa12.81□□□□□ -0.36
CCL13-201ENST00000225844 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
CCL13-201ENST00000225844 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
CCL13-201ENST00000225844 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
CCL13-201ENST00000225844 SHROOM2Q13796 1616 aa12.77□□□□□ -0.36
CCL13-201ENST00000225844 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
CCL13-201ENST00000225844 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
CCL13-201ENST00000225844 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
CCL13-201ENST00000225844 KDM6BO15054 1643 aa12.7□□□□□ -0.38
CCL13-201ENST00000225844 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
CCL13-201ENST00000225844 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
CCL13-201ENST00000225844 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
CCL13-201ENST00000225844 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
CCL13-201ENST00000225844 TTBK1Q5TCY1 1321 aaPredicted RBP12.66□□□□□ -0.38
CCL13-201ENST00000225844 EEA1Q15075 1411 aa12.66□□□□□ -0.38
CCL13-201ENST00000225844 ADCY10Q96PN6 1610 aa12.64□□□□□ -0.39
CCL13-201ENST00000225844 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
CCL13-201ENST00000225844 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
CCL13-201ENST00000225844 IGF1RP08069 1367 aa12.59□□□□□ -0.39
CCL13-201ENST00000225844 PTPRGP23470 1445 aa12.59□□□□□ -0.39
CCL13-201ENST00000225844 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
CCL13-201ENST00000225844 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
CCL13-201ENST00000225844 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
CCL13-201ENST00000225844 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
CCL13-201ENST00000225844 ABCC2Q92887 1545 aa12.52□□□□□ -0.4
CCL13-201ENST00000225844 CARMIL1Q5VZK9 1371 aa12.52□□□□□ -0.41
CCL13-201ENST00000225844 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
CCL13-201ENST00000225844 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
CCL13-201ENST00000225844 CARMIL2Q6F5E8 1435 aa12.51□□□□□ -0.41
CCL13-201ENST00000225844 CUL7Q14999 1698 aa12.51□□□□□ -0.41
CCL13-201ENST00000225844 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
CCL13-201ENST00000225844 HECW2Q9P2P5 1572 aa12.5□□□□□ -0.41
CCL13-201ENST00000225844 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
CCL13-201ENST00000225844 COL17A1Q9UMD9 1497 aaPredicted RBP12.47□□□□□ -0.41
CCL13-201ENST00000225844 GLI2P10070 1586 aa12.47□□□□□ -0.41
CCL13-201ENST00000225844 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
CCL13-201ENST00000225844 TEX14Q8IWB6 1497 aa12.45□□□□□ -0.42
CCL13-201ENST00000225844 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
CCL13-201ENST00000225844 EPRSP07814 1512 aaKnown RBP12.44□□□□□ -0.42
CCL13-201ENST00000225844 PPRC1Q5VV67 1664 aaKnown RBP12.43□□□□□ -0.42
CCL13-201ENST00000225844 UHRF1BP1LA0JNW5 1464 aa12.42□□□□□ -0.42
CCL13-201ENST00000225844 FBXO41Q8TF61 875 aa12.41□□□□□ -0.42
CCL13-201ENST00000225844 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
CCL13-201ENST00000225844 KIF21BO75037 1637 aa12.38□□□□□ -0.43
CCL13-201ENST00000225844 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
CCL13-201ENST00000225844 IQGAP2Q13576 1575 aa12.38□□□□□ -0.43
CCL13-201ENST00000225844 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
CCL13-201ENST00000225844 MAP3K4Q9Y6R4 1608 aa12.37□□□□□ -0.43
CCL13-201ENST00000225844 KCNH8Q96L42 1107 aa12.36□□□□□ -0.43
CCL13-201ENST00000225844 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
CCL13-201ENST00000225844 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
CCL13-201ENST00000225844 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
CCL13-201ENST00000225844 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
CCL13-201ENST00000225844 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.44
CCL13-201ENST00000225844 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
CCL13-201ENST00000225844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCL13-201ENST00000225844 MAGI3Q5TCQ9 1506 aa12.28□□□□□ -0.44
CCL13-201ENST00000225844 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
CCL13-201ENST00000225844 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
CCL13-201ENST00000225844 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
CCL13-201ENST00000225844 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
CCL13-201ENST00000225844 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
CCL13-201ENST00000225844 PTPRMP28827 1452 aa12.23□□□□□ -0.45
CCL13-201ENST00000225844 ZBTB22O15209 634 aa12.23□□□□□ -0.45
CCL13-201ENST00000225844 CTTNBP2Q8WZ74 1663 aa12.22□□□□□ -0.45
CCL13-201ENST00000225844 RAPGEF3O95398 923 aa12.21□□□□□ -0.45
CCL13-201ENST00000225844 CFAP43Q8NDM7 1665 aa12.21□□□□□ -0.45
CCL13-201ENST00000225844 LMTK3Q96Q04 1460 aa12.2□□□□□ -0.46
CCL13-201ENST00000225844 EFCAB5A4FU69 1503 aa12.19□□□□□ -0.46
CCL13-201ENST00000225844 ARAP3Q8WWN8 1544 aa12.19□□□□□ -0.46
CCL13-201ENST00000225844 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
CCL13-201ENST00000225844 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
CCL13-201ENST00000225844 ABCA8O94911 1581 aa12.17□□□□□ -0.46
CCL13-201ENST00000225844 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
CCL13-201ENST00000225844 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
CCL13-201ENST00000225844 PHLDB1Q86UU1 1377 aa12.16□□□□□ -0.46
CCL13-201ENST00000225844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
CCL13-201ENST00000225844 HSPA2P54652 639 aa12.15□□□□□ -0.46
CCL13-201ENST00000225844 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
CCL13-201ENST00000225844 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
CCL13-201ENST00000225844 CLIP1P30622 1438 aa12.13□□□□□ -0.47
CCL13-201ENST00000225844 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
CCL13-201ENST00000225844 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms