RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 NUP160Q12769 1436 aa26.64■■□□□ 1.85
CHMP5-201ENST00000223500 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
CHMP5-201ENST00000223500 KIAA0586Q9BVV6 1533 aa26.6■■□□□ 1.85
CHMP5-201ENST00000223500 IQGAP2Q13576 1575 aa26.56■■□□□ 1.84
CHMP5-201ENST00000223500 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
CHMP5-201ENST00000223500 RANGAP1P46060 587 aaPredicted RBP26.51■■□□□ 1.83
CHMP5-201ENST00000223500 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
CHMP5-201ENST00000223500 CLIP1P30622 1438 aa26.48■■□□□ 1.83
CHMP5-201ENST00000223500 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
CHMP5-201ENST00000223500 JPH4Q96JJ6 628 aa26.43■■□□□ 1.82
CHMP5-201ENST00000223500 UGGT2Q9NYU1 1516 aa26.43■■□□□ 1.82
CHMP5-201ENST00000223500 EFCAB5A4FU69 1503 aa26.41■■□□□ 1.82
CHMP5-201ENST00000223500 ARHGAP35Q9NRY4 1499 aa26.36■■□□□ 1.81
CHMP5-201ENST00000223500 SAMD9Q5K651 1589 aa26.35■■□□□ 1.81
CHMP5-201ENST00000223500 SHROOM2Q13796 1616 aa26.34■■□□□ 1.81
CHMP5-201ENST00000223500 CARMIL2Q6F5E8 1435 aa26.33■■□□□ 1.81
CHMP5-201ENST00000223500 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
CHMP5-201ENST00000223500 PRG4Q92954 1404 aaPredicted RBP26.29■■□□□ 1.8
CHMP5-201ENST00000223500 DISP1Q96F81 1524 aa26.28■■□□□ 1.8
CHMP5-201ENST00000223500 KIAA0556O60303 1618 aa26.28■■□□□ 1.8
CHMP5-201ENST00000223500 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
CHMP5-201ENST00000223500 FHOD3Q2V2M9 1422 aa26.24■■□□□ 1.79
CHMP5-201ENST00000223500 FMN1Q68DA7 1419 aa26.17■■□□□ 1.78
CHMP5-201ENST00000223500 VPS8Q8N3P4 1428 aa26.17■■□□□ 1.78
CHMP5-201ENST00000223500 ERCC6L2Q5T890 1561 aa26.13■■□□□ 1.77
CHMP5-201ENST00000223500 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
CHMP5-201ENST00000223500 PTPRGP23470 1445 aa26.1■■□□□ 1.77
CHMP5-201ENST00000223500 CASKIN1Q8WXD9 1431 aa26.03■■□□□ 1.76
CHMP5-201ENST00000223500 ARHGEF11O15085 1522 aa26.02■■□□□ 1.76
CHMP5-201ENST00000223500 PCF11O94913 1555 aaKnown RBP26■■□□□ 1.75
CHMP5-201ENST00000223500 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
CHMP5-201ENST00000223500 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
CHMP5-201ENST00000223500 APLP2Q06481 763 aa25.98■■□□□ 1.75
CHMP5-201ENST00000223500 RAPGEF6Q8TEU7 1601 aa25.97■■□□□ 1.75
CHMP5-201ENST00000223500 HECW1Q76N89 1606 aa25.95■■□□□ 1.74
CHMP5-201ENST00000223500 PLB1Q6P1J6 1458 aa25.94■■□□□ 1.74
CHMP5-201ENST00000223500 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
CHMP5-201ENST00000223500 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
CHMP5-201ENST00000223500 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
CHMP5-201ENST00000223500 ABCA8O94911 1581 aa25.94■■□□□ 1.74
CHMP5-201ENST00000223500 UACAQ9BZF9 1416 aa25.92■■□□□ 1.74
CHMP5-201ENST00000223500 ABCC2Q92887 1545 aa25.86■■□□□ 1.73
CHMP5-201ENST00000223500 NUP153P49790 1475 aaKnown RBP25.85■■□□□ 1.73
CHMP5-201ENST00000223500 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
CHMP5-201ENST00000223500 UHRF1BP1LA0JNW5 1464 aa25.85■■□□□ 1.73
CHMP5-201ENST00000223500 MAP3K1Q13233 1512 aa25.84■■□□□ 1.73
CHMP5-201ENST00000223500 EPRSP07814 1512 aaKnown RBP25.83■■□□□ 1.73
CHMP5-201ENST00000223500 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
CHMP5-201ENST00000223500 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
CHMP5-201ENST00000223500 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
CHMP5-201ENST00000223500 ARID3CA6NKF2 412 aa25.79■■□□□ 1.72
CHMP5-201ENST00000223500 CYB5RLQ6IPT4 315 aa25.79■■□□□ 1.72
CHMP5-201ENST00000223500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.78■■□□□ 1.72
CHMP5-201ENST00000223500 HNRNPUL2Q1KMD3 747 aaKnown RBP25.78■■□□□ 1.72
CHMP5-201ENST00000223500 ADCY10Q96PN6 1610 aa25.77■■□□□ 1.72
CHMP5-201ENST00000223500 CDK13Q14004 1512 aaKnown RBP25.76■■□□□ 1.71
CHMP5-201ENST00000223500 CDK11AQ9UQ88 783 aaPredicted RBP25.75■■□□□ 1.71
CHMP5-201ENST00000223500 ATP10BO94823 1461 aa25.75■■□□□ 1.71
CHMP5-201ENST00000223500 DNAJC5Q9H3Z4 198 aa25.73■■□□□ 1.71
CHMP5-201ENST00000223500 KDM5BQ9UGL1 1544 aa25.71■■□□□ 1.71
CHMP5-201ENST00000223500 NPM1P06748 294 aaKnown RBP eCLIP25.71■■□□□ 1.71
CHMP5-201ENST00000223500 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
CHMP5-201ENST00000223500 PPARGC1BQ86YN6 1023 aaKnown RBP25.68■■□□□ 1.7
CHMP5-201ENST00000223500 MTUS2Q5JR59 1369 aa25.68■■□□□ 1.7
CHMP5-201ENST00000223500 ZCCHC11Q5TAX3 1644 aaKnown RBP25.68■■□□□ 1.7
CHMP5-201ENST00000223500 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
CHMP5-201ENST00000223500 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
CHMP5-201ENST00000223500 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
CHMP5-201ENST00000223500 TROQ12816 1431 aaPredicted RBP25.59■■□□□ 1.69
CHMP5-201ENST00000223500 MAGI3Q5TCQ9 1506 aa25.59■■□□□ 1.69
CHMP5-201ENST00000223500 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
CHMP5-201ENST00000223500 ASXL2Q76L83 1435 aa25.5■■□□□ 1.67
CHMP5-201ENST00000223500 WDR7Q9Y4E6 1490 aa25.49■■□□□ 1.67
CHMP5-201ENST00000223500 KIF14Q15058 1648 aa25.49■■□□□ 1.67
CHMP5-201ENST00000223500 NCOA2Q15596 1464 aa25.48■■□□□ 1.67
CHMP5-201ENST00000223500 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
CHMP5-201ENST00000223500 KCNH8Q96L42 1107 aa25.46■■□□□ 1.67
CHMP5-201ENST00000223500 CCNB3Q8WWL7 1395 aa25.39■■□□□ 1.66
CHMP5-201ENST00000223500 PHLDB1Q86UU1 1377 aa25.38■■□□□ 1.65
CHMP5-201ENST00000223500 ABCC10Q5T3U5 1492 aa25.36■■□□□ 1.65
CHMP5-201ENST00000223500 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
CHMP5-201ENST00000223500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.35■■□□□ 1.65
CHMP5-201ENST00000223500 ITSN2Q9NZM3 1697 aa25.33■■□□□ 1.65
CHMP5-201ENST00000223500 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
CHMP5-201ENST00000223500 TTC37Q6PGP7 1564 aa25.31■■□□□ 1.64
CHMP5-201ENST00000223500 GPATCH8Q9UKJ3 1502 aaKnown RBP25.3■■□□□ 1.64
CHMP5-201ENST00000223500 CDC42BPAQ5VT25 1732 aa25.3■■□□□ 1.64
CHMP5-201ENST00000223500 ABCA9Q8IUA7 1624 aa25.3■■□□□ 1.64
CHMP5-201ENST00000223500 MYO5CQ9NQX4 1742 aa25.29■■□□□ 1.64
CHMP5-201ENST00000223500 FGD6Q6ZV73 1430 aa25.28■■□□□ 1.64
CHMP5-201ENST00000223500 MIA2Q96PC5 1412 aa25.28■■□□□ 1.64
CHMP5-201ENST00000223500 RRBP1Q9P2E9 1410 aaKnown RBP25.28■■□□□ 1.64
CHMP5-201ENST00000223500 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
CHMP5-201ENST00000223500 PREX2Q70Z35 1606 aa25.25■■□□□ 1.63
CHMP5-201ENST00000223500 GLI2P10070 1586 aa25.25■■□□□ 1.63
CHMP5-201ENST00000223500 DIP2BQ9P265 1576 aa25.23■■□□□ 1.63
CHMP5-201ENST00000223500 PLCH2O75038 1416 aa25.23■■□□□ 1.63
CHMP5-201ENST00000223500 CDC42BPBQ9Y5S2 1711 aa25.22■■□□□ 1.63
CHMP5-201ENST00000223500 PTPN23Q9H3S7 1636 aa25.22■■□□□ 1.63
CHMP5-201ENST00000223500 FAM69CQ0P6D2 419 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms