RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
SIPA1L3-201ENST00000222345 NRDCO43847 1150 aa17.96■□□□□ 0.47
SIPA1L3-201ENST00000222345 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
SIPA1L3-201ENST00000222345 ABCC9O60706 1549 aa17.93■□□□□ 0.46
SIPA1L3-201ENST00000222345 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
SIPA1L3-201ENST00000222345 PTMSP20962 102 aa17.89■□□□□ 0.45
SIPA1L3-201ENST00000222345 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.45
SIPA1L3-201ENST00000222345 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
SIPA1L3-201ENST00000222345 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
SIPA1L3-201ENST00000222345 ZNF777Q9ULD5 760 aaPredicted RBP17.85■□□□□ 0.45
SIPA1L3-201ENST00000222345 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
SIPA1L3-201ENST00000222345 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
SIPA1L3-201ENST00000222345 TNNT3P45378 269 aaPredicted RBP17.82■□□□□ 0.44
SIPA1L3-201ENST00000222345 STAG3Q9UJ98 1225 aa17.81■□□□□ 0.44
SIPA1L3-201ENST00000222345 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
SIPA1L3-201ENST00000222345 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
SIPA1L3-201ENST00000222345 PNNQ9H307 717 aaKnown RBP17.79■□□□□ 0.44
SIPA1L3-201ENST00000222345 CHGAP10645 457 aaKnown RBP17.79■□□□□ 0.44
SIPA1L3-201ENST00000222345 HSP90AB1P08238 724 aaKnown RBP17.74■□□□□ 0.43
SIPA1L3-201ENST00000222345 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SIPA1L3-201ENST00000222345 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
SIPA1L3-201ENST00000222345 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
SIPA1L3-201ENST00000222345 HSP90AA2PQ14568 343 aaPredicted RBP17.71■□□□□ 0.43
SIPA1L3-201ENST00000222345 CFAP44Q96MT7 982 aa17.71■□□□□ 0.43
SIPA1L3-201ENST00000222345 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
SIPA1L3-201ENST00000222345 AMER1Q5JTC6 1135 aaPredicted RBP17.7■□□□□ 0.42
SIPA1L3-201ENST00000222345 HSCBQ8IWL3 235 aa17.69■□□□□ 0.42
SIPA1L3-201ENST00000222345 KIAA2012Q0VF49 1180 aa17.69■□□□□ 0.42
SIPA1L3-201ENST00000222345 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
SIPA1L3-201ENST00000222345 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
SIPA1L3-201ENST00000222345 A0A0G2JS52 829 aa17.67■□□□□ 0.42
SIPA1L3-201ENST00000222345 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
SIPA1L3-201ENST00000222345 PLCB2Q00722 1185 aa17.66■□□□□ 0.42
SIPA1L3-201ENST00000222345 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.42
SIPA1L3-201ENST00000222345 MS4A1P11836 297 aa17.64■□□□□ 0.41
SIPA1L3-201ENST00000222345 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
SIPA1L3-201ENST00000222345 DRC7Q8IY82 874 aa17.59■□□□□ 0.41
SIPA1L3-201ENST00000222345 PLEKHG5O94827 1062 aa17.58■□□□□ 0.41
SIPA1L3-201ENST00000222345 GOLGA6L1Q8N7Z2 621 aa17.57■□□□□ 0.4
SIPA1L3-201ENST00000222345 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
SIPA1L3-201ENST00000222345 SETQ01105 290 aaPredicted RBP17.57■□□□□ 0.4
SIPA1L3-201ENST00000222345 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
SIPA1L3-201ENST00000222345 GOLGA6L4A6NEF3 574 aa17.56■□□□□ 0.4
SIPA1L3-201ENST00000222345 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
SIPA1L3-201ENST00000222345 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
SIPA1L3-201ENST00000222345 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
SIPA1L3-201ENST00000222345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
SIPA1L3-201ENST00000222345 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
SIPA1L3-201ENST00000222345 MCCP23508 829 aa17.5■□□□□ 0.39
SIPA1L3-201ENST00000222345 RGS3P49796 1198 aa17.5■□□□□ 0.39
SIPA1L3-201ENST00000222345 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
SIPA1L3-201ENST00000222345 CALRP27797 417 aaKnown RBP17.5■□□□□ 0.39
SIPA1L3-201ENST00000222345 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
SIPA1L3-201ENST00000222345 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
SIPA1L3-201ENST00000222345 IPO9Q96P70 1041 aaKnown RBP17.49■□□□□ 0.39
SIPA1L3-201ENST00000222345 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
SIPA1L3-201ENST00000222345 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
SIPA1L3-201ENST00000222345 PHF14O94880 888 aa17.44■□□□□ 0.38
SIPA1L3-201ENST00000222345 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
SIPA1L3-201ENST00000222345 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
SIPA1L3-201ENST00000222345 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
SIPA1L3-201ENST00000222345 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
SIPA1L3-201ENST00000222345 C14orf37Q86TY3 774 aa17.4■□□□□ 0.38
SIPA1L3-201ENST00000222345 TPM4P67936 248 aa17.39■□□□□ 0.37
SIPA1L3-201ENST00000222345 FGD1P98174 961 aa17.38■□□□□ 0.37
SIPA1L3-201ENST00000222345 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
SIPA1L3-201ENST00000222345 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
SIPA1L3-201ENST00000222345 NOC3LQ8WTT2 800 aaKnown RBP17.37■□□□□ 0.37
SIPA1L3-201ENST00000222345 CLIP1P30622 1438 aa17.36■□□□□ 0.37
SIPA1L3-201ENST00000222345 ARID3AQ99856 593 aa17.36■□□□□ 0.37
SIPA1L3-201ENST00000222345 EEA1Q15075 1411 aa17.36■□□□□ 0.37
SIPA1L3-201ENST00000222345 DDX11L8A8MPP1 907 aa17.36■□□□□ 0.37
SIPA1L3-201ENST00000222345 MTERF4Q7Z6M4 381 aaKnown RBP17.35■□□□□ 0.37
SIPA1L3-201ENST00000222345 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
SIPA1L3-201ENST00000222345 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
SIPA1L3-201ENST00000222345 KCNJ4P48050 445 aa17.34■□□□□ 0.37
SIPA1L3-201ENST00000222345 CHIC2Q9UKJ5 165 aa17.33■□□□□ 0.36
SIPA1L3-201ENST00000222345 KDM2AQ9Y2K7 1162 aa17.33■□□□□ 0.36
SIPA1L3-201ENST00000222345 GPS2Q13227 327 aa17.33■□□□□ 0.36
SIPA1L3-201ENST00000222345 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
SIPA1L3-201ENST00000222345 GSE1Q14687 1217 aa17.32■□□□□ 0.36
SIPA1L3-201ENST00000222345 GZF1Q9H116 711 aaPredicted RBP17.32■□□□□ 0.36
SIPA1L3-201ENST00000222345 MAP7D2Q96T17 732 aa17.31■□□□□ 0.36
SIPA1L3-201ENST00000222345 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
SIPA1L3-201ENST00000222345 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-201ENST00000222345 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
SIPA1L3-201ENST00000222345 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
SIPA1L3-201ENST00000222345 TEX35Q5T0J7 233 aa17.29■□□□□ 0.36
SIPA1L3-201ENST00000222345 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
SIPA1L3-201ENST00000222345 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
SIPA1L3-201ENST00000222345 SKOR2Q2VWA4 1001 aaPredicted RBP17.28■□□□□ 0.36
SIPA1L3-201ENST00000222345 NUDCQ9Y266 331 aa17.27■□□□□ 0.36
SIPA1L3-201ENST00000222345 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
SIPA1L3-201ENST00000222345 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
SIPA1L3-201ENST00000222345 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
SIPA1L3-201ENST00000222345 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
SIPA1L3-201ENST00000222345 FANCIQ9NVI1 1328 aa17.26■□□□□ 0.35
SIPA1L3-201ENST00000222345 PKNOX2Q96KN3 472 aa17.26■□□□□ 0.35
SIPA1L3-201ENST00000222345 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
SIPA1L3-201ENST00000222345 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms