RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 IGF1RP08069 1367 aa27.67■■■□□ 2.02
LIM2-201ENST00000221973 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
LIM2-201ENST00000221973 CUL7Q14999 1698 aa27.54■■■□□ 2
LIM2-201ENST00000221973 KIAA0586Q9BVV6 1533 aa27.52■■■□□ 2
LIM2-201ENST00000221973 KIF13AQ9H1H9 1805 aa27.44■■□□□ 1.98
LIM2-201ENST00000221973 CARMIL1Q5VZK9 1371 aa27.43■■□□□ 1.98
LIM2-201ENST00000221973 ADCY10Q96PN6 1610 aa27.4■■□□□ 1.98
LIM2-201ENST00000221973 MAPKBP1O60336 1514 aa27.34■■□□□ 1.97
LIM2-201ENST00000221973 ABCC10Q5T3U5 1492 aa27.32■■□□□ 1.96
LIM2-201ENST00000221973 NPM1P06748 294 aaKnown RBP eCLIP27.27■■□□□ 1.96
LIM2-201ENST00000221973 FAM69CQ0P6D2 419 aa27.25■■□□□ 1.95
LIM2-201ENST00000221973 DIP2BQ9P265 1576 aa27.25■■□□□ 1.95
LIM2-201ENST00000221973 IQGAP2Q13576 1575 aa27.24■■□□□ 1.95
LIM2-201ENST00000221973 PTPRGP23470 1445 aa27.24■■□□□ 1.95
LIM2-201ENST00000221973 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
LIM2-201ENST00000221973 TNIKQ9UKE5 1360 aa27.2■■□□□ 1.94
LIM2-201ENST00000221973 CARMIL2Q6F5E8 1435 aa27.18■■□□□ 1.94
LIM2-201ENST00000221973 RAPGEF2Q9Y4G8 1499 aa27.18■■□□□ 1.94
LIM2-201ENST00000221973 DISP1Q96F81 1524 aa27.17■■□□□ 1.94
LIM2-201ENST00000221973 EEA1Q15075 1411 aa27.16■■□□□ 1.94
LIM2-201ENST00000221973 TTBK1Q5TCY1 1321 aaPredicted RBP27.14■■□□□ 1.93
LIM2-201ENST00000221973 CSRNP3Q8WYN3 585 aa27.12■■□□□ 1.93
LIM2-201ENST00000221973 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
LIM2-201ENST00000221973 UGGT2Q9NYU1 1516 aa27.11■■□□□ 1.93
LIM2-201ENST00000221973 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
LIM2-201ENST00000221973 UHRF1BP1LA0JNW5 1464 aa27.08■■□□□ 1.93
LIM2-201ENST00000221973 UACAQ9BZF9 1416 aa27.05■■□□□ 1.92
LIM2-201ENST00000221973 ASXL2Q76L83 1435 aa27.02■■□□□ 1.92
LIM2-201ENST00000221973 KIAA0556O60303 1618 aa27.01■■□□□ 1.92
LIM2-201ENST00000221973 TSPOAP1O95153 1857 aa27.01■■□□□ 1.91
LIM2-201ENST00000221973 PLB1Q6P1J6 1458 aa26.98■■□□□ 1.91
LIM2-201ENST00000221973 KDM5BQ9UGL1 1544 aa26.97■■□□□ 1.91
LIM2-201ENST00000221973 PRXQ9BXM0 1461 aa26.96■■□□□ 1.91
LIM2-201ENST00000221973 KDM6BO15054 1643 aa26.96■■□□□ 1.91
LIM2-201ENST00000221973 GLI2P10070 1586 aa26.95■■□□□ 1.9
LIM2-201ENST00000221973 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.9
LIM2-201ENST00000221973 PPRC1Q5VV67 1664 aaKnown RBP26.92■■□□□ 1.9
LIM2-201ENST00000221973 ZCCHC11Q5TAX3 1644 aaKnown RBP26.89■■□□□ 1.9
LIM2-201ENST00000221973 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
LIM2-201ENST00000221973 EPRSP07814 1512 aaKnown RBP26.86■■□□□ 1.89
LIM2-201ENST00000221973 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
LIM2-201ENST00000221973 MAP3K4Q9Y6R4 1608 aa26.81■■□□□ 1.88
LIM2-201ENST00000221973 KIF21BO75037 1637 aa26.8■■□□□ 1.88
LIM2-201ENST00000221973 ABCA8O94911 1581 aa26.8■■□□□ 1.88
LIM2-201ENST00000221973 COL17A1Q9UMD9 1497 aaPredicted RBP26.76■■□□□ 1.87
LIM2-201ENST00000221973 KDM4FA0A1W2PPD8 638 aa26.76■■□□□ 1.87
LIM2-201ENST00000221973 WDR7Q9Y4E6 1490 aa26.74■■□□□ 1.87
LIM2-201ENST00000221973 UBTFP17480 764 aaKnown RBP26.71■■□□□ 1.87
LIM2-201ENST00000221973 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
LIM2-201ENST00000221973 TEX14Q8IWB6 1497 aa26.66■■□□□ 1.86
LIM2-201ENST00000221973 P3H3Q8IVL6 736 aa26.62■■□□□ 1.85
LIM2-201ENST00000221973 SAMD9Q5K651 1589 aa26.61■■□□□ 1.85
LIM2-201ENST00000221973 KCNH8Q96L42 1107 aa26.58■■□□□ 1.85
LIM2-201ENST00000221973 MAGI3Q5TCQ9 1506 aa26.58■■□□□ 1.85
LIM2-201ENST00000221973 CD109Q6YHK3 1445 aa26.57■■□□□ 1.84
LIM2-201ENST00000221973 CFAP43Q8NDM7 1665 aa26.57■■□□□ 1.84
LIM2-201ENST00000221973 ATP10BO94823 1461 aa26.57■■□□□ 1.84
LIM2-201ENST00000221973 RANGAP1P46060 587 aaPredicted RBP26.53■■□□□ 1.84
LIM2-201ENST00000221973 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
LIM2-201ENST00000221973 ADGRL1O94910 1474 aa26.5■■□□□ 1.83
LIM2-201ENST00000221973 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
LIM2-201ENST00000221973 NUP153P49790 1475 aaKnown RBP26.42■■□□□ 1.82
LIM2-201ENST00000221973 FHOD3Q2V2M9 1422 aa26.41■■□□□ 1.82
LIM2-201ENST00000221973 ABCA9Q8IUA7 1624 aa26.41■■□□□ 1.82
LIM2-201ENST00000221973 ARAP3Q8WWN8 1544 aa26.38■■□□□ 1.81
LIM2-201ENST00000221973 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
LIM2-201ENST00000221973 CLIP1P30622 1438 aa26.3■■□□□ 1.8
LIM2-201ENST00000221973 EFCAB5A4FU69 1503 aa26.29■■□□□ 1.8
LIM2-201ENST00000221973 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
LIM2-201ENST00000221973 HNRNPUL2Q1KMD3 747 aaKnown RBP26.27■■□□□ 1.8
LIM2-201ENST00000221973 PHLDB1Q86UU1 1377 aa26.27■■□□□ 1.8
LIM2-201ENST00000221973 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
LIM2-201ENST00000221973 NEO1Q92859 1461 aa26.24■■□□□ 1.79
LIM2-201ENST00000221973 RAPGEF3O95398 923 aa26.22■■□□□ 1.79
LIM2-201ENST00000221973 FRMPD1Q5SYB0 1578 aa26.2■■□□□ 1.79
LIM2-201ENST00000221973 PLEKHD1A6NEE1 506 aa26.18■■□□□ 1.78
LIM2-201ENST00000221973 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.16■■□□□ 1.78
LIM2-201ENST00000221973 CDK13Q14004 1512 aaKnown RBP26.14■■□□□ 1.78
LIM2-201ENST00000221973 HECW2Q9P2P5 1572 aa26.13■■□□□ 1.77
LIM2-201ENST00000221973 TTC37Q6PGP7 1564 aa26.12■■□□□ 1.77
LIM2-201ENST00000221973 AKNAQ7Z591 1439 aa26.08■■□□□ 1.77
LIM2-201ENST00000221973 ADAMTSL3P82987 1691 aa26.07■■□□□ 1.76
LIM2-201ENST00000221973 FANCAO15360 1455 aa26.07■■□□□ 1.76
LIM2-201ENST00000221973 RICTORQ6R327 1708 aa26.07■■□□□ 1.76
LIM2-201ENST00000221973 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
LIM2-201ENST00000221973 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
LIM2-201ENST00000221973 CFAP74Q9C0B2 1584 aa26.02■■□□□ 1.76
LIM2-201ENST00000221973 HECW1Q76N89 1606 aa26.01■■□□□ 1.75
LIM2-201ENST00000221973 ARHGEF40Q8TER5 1519 aa26.01■■□□□ 1.75
LIM2-201ENST00000221973 BCORL1Q5H9F3 1711 aa26■■□□□ 1.75
LIM2-201ENST00000221973 PTPRMP28827 1452 aa25.98■■□□□ 1.75
LIM2-201ENST00000221973 PLCH2O75038 1416 aa25.98■■□□□ 1.75
LIM2-201ENST00000221973 ATP1B4Q9UN42 357 aaPredicted RBP25.98■■□□□ 1.75
LIM2-201ENST00000221973 ZMYM4Q5VZL5 1548 aa25.97■■□□□ 1.75
LIM2-201ENST00000221973 LRRIQ1Q96JM4 1722 aa25.94■■□□□ 1.74
LIM2-201ENST00000221973 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
LIM2-201ENST00000221973 KIF14Q15058 1648 aa25.92■■□□□ 1.74
LIM2-201ENST00000221973 MADDQ8WXG6 1647 aa25.92■■□□□ 1.74
LIM2-201ENST00000221973 SIGLEC1Q9BZZ2 1709 aa25.92■■□□□ 1.74
LIM2-201ENST00000221973 YEATS2Q9ULM3 1422 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms