RNA–Protein interactions for RNA: ENST00000218328.12

HUWE1-201, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene HUWE1, Length 5,488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-201ENST00000218328 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
HUWE1-201ENST00000218328 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
HUWE1-201ENST00000218328 BECN1Q14457 450 aa23.52■■□□□ 1.36
HUWE1-201ENST00000218328 MYH16Q9H6N6 1097 aa23.51■■□□□ 1.35
HUWE1-201ENST00000218328 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
HUWE1-201ENST00000218328 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
HUWE1-201ENST00000218328 SUPT16HQ9Y5B9 1047 aaKnown RBP23.48■■□□□ 1.35
HUWE1-201ENST00000218328 CCDC180Q9P1Z9 1646 aa23.46■■□□□ 1.35
HUWE1-201ENST00000218328 EEA1Q15075 1411 aa23.46■■□□□ 1.35
HUWE1-201ENST00000218328 TRIM44Q96DX7 344 aaPredicted RBP23.4■■□□□ 1.34
HUWE1-201ENST00000218328 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.34
HUWE1-201ENST00000218328 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.34
HUWE1-201ENST00000218328 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
HUWE1-201ENST00000218328 GOLGA6L22H0YM25 854 aa23.34■■□□□ 1.33
HUWE1-201ENST00000218328 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
HUWE1-201ENST00000218328 PPP4R2Q9NY27 417 aa23.34■■□□□ 1.33
HUWE1-201ENST00000218328 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
HUWE1-201ENST00000218328 TNIKQ9UKE5 1360 aa23.31■■□□□ 1.32
HUWE1-201ENST00000218328 RGL3Q3MIN7 710 aa23.3■■□□□ 1.32
HUWE1-201ENST00000218328 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
HUWE1-201ENST00000218328 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
HUWE1-201ENST00000218328 CFAP53Q96M91 514 aa23.25■■□□□ 1.31
HUWE1-201ENST00000218328 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
HUWE1-201ENST00000218328 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
HUWE1-201ENST00000218328 CDCA8Q53HL2 280 aa23.24■■□□□ 1.31
HUWE1-201ENST00000218328 NOP58Q9Y2X3 529 aaKnown RBP23.23■■□□□ 1.31
HUWE1-201ENST00000218328 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
HUWE1-201ENST00000218328 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
HUWE1-201ENST00000218328 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
HUWE1-201ENST00000218328 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
HUWE1-201ENST00000218328 ERICH6BQ5W0A0 696 aa23.2■■□□□ 1.3
HUWE1-201ENST00000218328 FTSJ3Q8IY81 847 aaKnown RBP23.19■■□□□ 1.3
HUWE1-201ENST00000218328 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
HUWE1-201ENST00000218328 PTMAP06454 111 aaKnown RBP23.16■■□□□ 1.3
HUWE1-201ENST00000218328 RGS3P49796 1198 aa23.15■■□□□ 1.3
HUWE1-201ENST00000218328 CFDP1Q9UEE9 299 aaPredicted RBP23.15■■□□□ 1.3
HUWE1-201ENST00000218328 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
HUWE1-201ENST00000218328 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.29
HUWE1-201ENST00000218328 CASC1Q6TDU7 716 aa23.13■■□□□ 1.29
HUWE1-201ENST00000218328 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
HUWE1-201ENST00000218328 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
HUWE1-201ENST00000218328 RTN4Q9NQC3 1192 aaKnown RBP23.11■■□□□ 1.29
HUWE1-201ENST00000218328 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
HUWE1-201ENST00000218328 ZBTB7CA1YPR0 619 aa23.09■■□□□ 1.29
HUWE1-201ENST00000218328 CDK11BP21127 795 aaKnown RBP23.06■■□□□ 1.28
HUWE1-201ENST00000218328 DNTTIP2Q5QJE6 756 aaKnown RBP23.06■■□□□ 1.28
HUWE1-201ENST00000218328 C14orf37Q86TY3 774 aa23.06■■□□□ 1.28
HUWE1-201ENST00000218328 FRAT1Q92837 279 aaPredicted RBP23.06■■□□□ 1.28
HUWE1-201ENST00000218328 NAP1L5Q96NT1 182 aaPredicted RBP23.06■■□□□ 1.28
HUWE1-201ENST00000218328 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
HUWE1-201ENST00000218328 MAPK8IP3Q9UPT6 1336 aa23.05■■□□□ 1.28
HUWE1-201ENST00000218328 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
HUWE1-201ENST00000218328 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
HUWE1-201ENST00000218328 ZRSR1Q15695 479 aaKnown RBP23.02■■□□□ 1.28
HUWE1-201ENST00000218328 CCER2I3L3R5 266 aa23.02■■□□□ 1.28
HUWE1-201ENST00000218328 TPRNQ4KMQ1 711 aa23.01■■□□□ 1.27
HUWE1-201ENST00000218328 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
HUWE1-201ENST00000218328 PLEKHG5O94827 1062 aa23■■□□□ 1.27
HUWE1-201ENST00000218328 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
HUWE1-201ENST00000218328 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
HUWE1-201ENST00000218328 RBM19Q9Y4C8 960 aaKnown RBP22.98■■□□□ 1.27
HUWE1-201ENST00000218328 A0A0G2JS52 829 aa22.97■■□□□ 1.27
HUWE1-201ENST00000218328 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
HUWE1-201ENST00000218328 MS4A1P11836 297 aa22.95■■□□□ 1.26
HUWE1-201ENST00000218328 CHMP4BQ9H444 224 aaKnown RBP22.94■■□□□ 1.26
HUWE1-201ENST00000218328 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
HUWE1-201ENST00000218328 DEKP35659 375 aaKnown RBP22.93■■□□□ 1.26
HUWE1-201ENST00000218328 TMF1P82094 1093 aa22.89■■□□□ 1.25
HUWE1-201ENST00000218328 PLCB2Q00722 1185 aa22.89■■□□□ 1.25
HUWE1-201ENST00000218328 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
HUWE1-201ENST00000218328 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
HUWE1-201ENST00000218328 U2SURPO15042 1029 aaKnown RBP22.86■■□□□ 1.25
HUWE1-201ENST00000218328 HSCBQ8IWL3 235 aa22.86■■□□□ 1.25
HUWE1-201ENST00000218328 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
HUWE1-201ENST00000218328 POGKQ9P215 609 aa22.85■■□□□ 1.25
HUWE1-201ENST00000218328 SETD5Q9C0A6 1442 aa22.84■■□□□ 1.25
HUWE1-201ENST00000218328 L1TD1Q5T7N2 865 aaKnown RBP22.82■■□□□ 1.24
HUWE1-201ENST00000218328 PNNQ9H307 717 aaKnown RBP22.81■■□□□ 1.24
HUWE1-201ENST00000218328 SOGA1O94964 1423 aa22.8■■□□□ 1.24
HUWE1-201ENST00000218328 OS9Q13438 667 aaPredicted RBP22.76■■□□□ 1.23
HUWE1-201ENST00000218328 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
HUWE1-201ENST00000218328 SPRYD3Q8NCJ5 442 aa22.75■■□□□ 1.23
HUWE1-201ENST00000218328 GOLGA6L6A8MZA4 724 aa22.75■■□□□ 1.23
HUWE1-201ENST00000218328 NACADO15069 1562 aa22.74■■□□□ 1.23
HUWE1-201ENST00000218328 KCNJ4P48050 445 aa22.73■■□□□ 1.23
HUWE1-201ENST00000218328 FGD1P98174 961 aa22.73■■□□□ 1.23
HUWE1-201ENST00000218328 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
HUWE1-201ENST00000218328 MSNP26038 577 aaKnown RBP22.71■■□□□ 1.23
HUWE1-201ENST00000218328 KTN1Q86UP2 1357 aaKnown RBP22.71■■□□□ 1.23
HUWE1-201ENST00000218328 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
HUWE1-201ENST00000218328 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.22
HUWE1-201ENST00000218328 RCAN3Q9UKA8 241 aa22.69■■□□□ 1.22
HUWE1-201ENST00000218328 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
HUWE1-201ENST00000218328 HAP1P54257 671 aaPredicted RBP22.69■■□□□ 1.22
HUWE1-201ENST00000218328 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
HUWE1-201ENST00000218328 KANK4Q5T7N3 995 aaPredicted RBP22.68■■□□□ 1.22
HUWE1-201ENST00000218328 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
HUWE1-201ENST00000218328 GOLGA6L4A6NEF3 574 aa22.68■■□□□ 1.22
HUWE1-201ENST00000218328 NRDCO43847 1150 aa22.68■■□□□ 1.22
HUWE1-201ENST00000218328 TAOK2Q9UL54 1235 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms