RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
SLC22A4-201ENST00000200652 EFCAB5A4FU69 1503 aa27.1■■□□□ 1.93
SLC22A4-201ENST00000200652 TARBP1Q13395 1621 aaKnown RBP27.1■■□□□ 1.93
SLC22A4-201ENST00000200652 P3H3Q8IVL6 736 aa27.09■■□□□ 1.93
SLC22A4-201ENST00000200652 PCF11O94913 1555 aaKnown RBP27.06■■□□□ 1.92
SLC22A4-201ENST00000200652 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
SLC22A4-201ENST00000200652 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
SLC22A4-201ENST00000200652 LRRC9Q6ZRR7 1453 aa27.03■■□□□ 1.92
SLC22A4-201ENST00000200652 CFAP43Q8NDM7 1665 aa27.02■■□□□ 1.92
SLC22A4-201ENST00000200652 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
SLC22A4-201ENST00000200652 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.913e-8■■■■□ 26
SLC22A4-201ENST00000200652 FYCO1Q9BQS8 1478 aa26.96■■□□□ 1.91
SLC22A4-201ENST00000200652 CASKIN1Q8WXD9 1431 aa26.95■■□□□ 1.9
SLC22A4-201ENST00000200652 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
SLC22A4-201ENST00000200652 SAMD9Q5K651 1589 aa26.91■■□□□ 1.9
SLC22A4-201ENST00000200652 ATP1B4Q9UN42 357 aaPredicted RBP26.9■■□□□ 1.9
SLC22A4-201ENST00000200652 DHX57Q6P158 1386 aaKnown RBP26.9■■□□□ 1.9
SLC22A4-201ENST00000200652 FMN1Q68DA7 1419 aa26.89■■□□□ 1.9
SLC22A4-201ENST00000200652 PHLDB1Q86UU1 1377 aa26.88■■□□□ 1.89
SLC22A4-201ENST00000200652 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
SLC22A4-201ENST00000200652 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
SLC22A4-201ENST00000200652 DIEXFQ68CQ4 756 aaKnown RBP26.82■■□□□ 1.88
SLC22A4-201ENST00000200652 ZNF316A6NFI3 1004 aaPredicted RBP26.82■■□□□ 1.88
SLC22A4-201ENST00000200652 ITGAEP38570 1179 aa26.82■■□□□ 1.88
SLC22A4-201ENST00000200652 WDR62O43379 1518 aa26.81■■□□□ 1.88
SLC22A4-201ENST00000200652 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
SLC22A4-201ENST00000200652 GRIN2BQ13224 1484 aa26.77■■□□□ 1.88
SLC22A4-201ENST00000200652 IFT140Q96RY7 1462 aa26.77■■□□□ 1.88
SLC22A4-201ENST00000200652 LRRIQ1Q96JM4 1722 aa26.73■■□□□ 1.87
SLC22A4-201ENST00000200652 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
SLC22A4-201ENST00000200652 FAM50AQ14320 339 aaKnown RBP26.7■■□□□ 1.86
SLC22A4-201ENST00000200652 IQGAP2Q13576 1575 aa26.69■■□□□ 1.86
SLC22A4-201ENST00000200652 RAB3GAP2Q9H2M9 1393 aa26.69■■□□□ 1.86
SLC22A4-201ENST00000200652 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
SLC22A4-201ENST00000200652 SETD5Q9C0A6 1442 aa26.65■■□□□ 1.86
SLC22A4-201ENST00000200652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.64■■□□□ 1.86
SLC22A4-201ENST00000200652 MTUS2Q5JR59 1369 aa26.64■■□□□ 1.85
SLC22A4-201ENST00000200652 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
SLC22A4-201ENST00000200652 FGD6Q6ZV73 1430 aa26.58■■□□□ 1.85
SLC22A4-201ENST00000200652 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
SLC22A4-201ENST00000200652 UGGT2Q9NYU1 1516 aa26.55■■□□□ 1.84
SLC22A4-201ENST00000200652 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
SLC22A4-201ENST00000200652 NCOA2Q15596 1464 aa26.54■■□□□ 1.84
SLC22A4-201ENST00000200652 SUPT6HQ7KZ85 1726 aaKnown RBP26.53■■□□□ 1.84
SLC22A4-201ENST00000200652 CCDC18Q5T9S5 1454 aa26.53■■□□□ 1.84
SLC22A4-201ENST00000200652 MAPKBP1O60336 1514 aa26.52■■□□□ 1.84
SLC22A4-201ENST00000200652 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
SLC22A4-201ENST00000200652 KIAA0586Q9BVV6 1533 aa26.5■■□□□ 1.83
SLC22A4-201ENST00000200652 MAGI3Q5TCQ9 1506 aa26.49■■□□□ 1.83
SLC22A4-201ENST00000200652 GRIN2AQ12879 1464 aa26.48■■□□□ 1.83
SLC22A4-201ENST00000200652 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
SLC22A4-201ENST00000200652 ARHGEF11O15085 1522 aa26.46■■□□□ 1.83
SLC22A4-201ENST00000200652 EPRSP07814 1512 aaKnown RBP26.45■■□□□ 1.82
SLC22A4-201ENST00000200652 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
SLC22A4-201ENST00000200652 DISP1Q96F81 1524 aa26.42■■□□□ 1.82
SLC22A4-201ENST00000200652 KIAA0556O60303 1618 aa26.41■■□□□ 1.82
SLC22A4-201ENST00000200652 PTPRKQ15262 1439 aa26.39■■□□□ 1.82
SLC22A4-201ENST00000200652 CDK13Q14004 1512 aaKnown RBP26.38■■□□□ 1.81
SLC22A4-201ENST00000200652 PTPN23Q9H3S7 1636 aa26.37■■□□□ 1.81
SLC22A4-201ENST00000200652 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
SLC22A4-201ENST00000200652 CHMP7Q8WUX9 453 aaPredicted RBP26.33■■□□□ 1.8
SLC22A4-201ENST00000200652 HFM1A2PYH4 1435 aa26.32■■□□□ 1.8
SLC22A4-201ENST00000200652 CEP170Q5SW79 1584 aa26.32■■□□□ 1.8
SLC22A4-201ENST00000200652 MIER1Q8N108 512 aa26.3■■□□□ 1.8
SLC22A4-201ENST00000200652 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
SLC22A4-201ENST00000200652 ARID3CA6NKF2 412 aa26.27■■□□□ 1.8
SLC22A4-201ENST00000200652 SIN3AQ96ST3 1273 aa26.27■■□□□ 1.8
SLC22A4-201ENST00000200652 RAPGEF6Q8TEU7 1601 aa26.27■■□□□ 1.8
SLC22A4-201ENST00000200652 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
SLC22A4-201ENST00000200652 NAIPQ13075 1403 aa26.26■■□□□ 1.79
SLC22A4-201ENST00000200652 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
SLC22A4-201ENST00000200652 SCAF1Q9H7N4 1312 aaKnown RBP26.25■■□□□ 1.79
SLC22A4-201ENST00000200652 FBLN2P98095 1184 aa26.23■■□□□ 1.79
SLC22A4-201ENST00000200652 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
SLC22A4-201ENST00000200652 MIA2Q96PC5 1412 aa26.23■■□□□ 1.79
SLC22A4-201ENST00000200652 NUP160Q12769 1436 aa26.22■■□□□ 1.79
SLC22A4-201ENST00000200652 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.79
SLC22A4-201ENST00000200652 UACAQ9BZF9 1416 aa26.2■■□□□ 1.79
SLC22A4-201ENST00000200652 TIMELESSQ9UNS1 1208 aa26.19■■□□□ 1.78
SLC22A4-201ENST00000200652 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
SLC22A4-201ENST00000200652 GCC2Q8IWJ2 1684 aa26.13■■□□□ 1.77
SLC22A4-201ENST00000200652 CARMIL2Q6F5E8 1435 aa26.12■■□□□ 1.77
SLC22A4-201ENST00000200652 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
SLC22A4-201ENST00000200652 CHIC2Q9UKJ5 165 aa26.11■■□□□ 1.77
SLC22A4-201ENST00000200652 PLB1Q6P1J6 1458 aa26.1■■□□□ 1.77
SLC22A4-201ENST00000200652 AKNAQ7Z591 1439 aa26.1■■□□□ 1.77
SLC22A4-201ENST00000200652 RRP7BPQ9NSQ0 103 aa26.1■■□□□ 1.77
SLC22A4-201ENST00000200652 PPP1R15AO75807 674 aaPredicted RBP26.05■■□□□ 1.76
SLC22A4-201ENST00000200652 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
SLC22A4-201ENST00000200652 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
SLC22A4-201ENST00000200652 PRG4Q92954 1404 aaPredicted RBP26.04■■□□□ 1.76
SLC22A4-201ENST00000200652 KDM6BO15054 1643 aa26.02■■□□□ 1.76
SLC22A4-201ENST00000200652 DNMT1P26358 1616 aaKnown RBP26.01■■□□□ 1.75
SLC22A4-201ENST00000200652 DAPK1P53355 1430 aa26■■□□□ 1.75
SLC22A4-201ENST00000200652 ADCY10Q96PN6 1610 aa25.98■■□□□ 1.75
SLC22A4-201ENST00000200652 TONSLQ96HA7 1378 aa25.98■■□□□ 1.75
SLC22A4-201ENST00000200652 ABCC5O15440 1437 aa25.97■■□□□ 1.75
SLC22A4-201ENST00000200652 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
SLC22A4-201ENST00000200652 ABCA8O94911 1581 aa25.97■■□□□ 1.75
SLC22A4-201ENST00000200652 ROCK1Q13464 1354 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms