RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 SENP3-EIF4A1A0A087X0R7 540 aa23.86■■□□□ 1.41
PTPN18-201ENST00000175756 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
PTPN18-201ENST00000175756 ZNF326Q5BKZ1 582 aaKnown RBP23.83■■□□□ 1.41
PTPN18-201ENST00000175756 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.41
PTPN18-201ENST00000175756 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.4
PTPN18-201ENST00000175756 CUX2O14529 1486 aa23.82■■□□□ 1.4
PTPN18-201ENST00000175756 RBM19Q9Y4C8 960 aaKnown RBP23.81■■□□□ 1.4
PTPN18-201ENST00000175756 CARMIL1Q5VZK9 1371 aa23.77■■□□□ 1.4
PTPN18-201ENST00000175756 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
PTPN18-201ENST00000175756 PPP1R15AO75807 674 aaPredicted RBP23.74■■□□□ 1.39
PTPN18-201ENST00000175756 MRS2Q9HD23 443 aa23.65■■□□□ 1.38
PTPN18-201ENST00000175756 PRXQ9BXM0 1461 aa23.64■■□□□ 1.37
PTPN18-201ENST00000175756 PHLDB1Q86UU1 1377 aa23.64■■□□□ 1.37
PTPN18-201ENST00000175756 RRBP1Q9P2E9 1410 aaKnown RBP23.63■■□□□ 1.37
PTPN18-201ENST00000175756 ARHGAP35Q9NRY4 1499 aa23.61■■□□□ 1.37
PTPN18-201ENST00000175756 CCER2I3L3R5 266 aa23.6■■□□□ 1.37
PTPN18-201ENST00000175756 FOXD1Q16676 465 aa23.6■■□□□ 1.37
PTPN18-201ENST00000175756 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
PTPN18-201ENST00000175756 IGF1RP08069 1367 aa23.57■■□□□ 1.36
PTPN18-201ENST00000175756 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
PTPN18-201ENST00000175756 B4GALNT3Q6L9W6 998 aa23.55■■□□□ 1.36
PTPN18-201ENST00000175756 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
PTPN18-201ENST00000175756 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
PTPN18-201ENST00000175756 BCL11AQ9H165 835 aa23.55■■□□□ 1.36
PTPN18-201ENST00000175756 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
PTPN18-201ENST00000175756 HSPA5P11021 654 aaKnown RBP23.52■■□□□ 1.36
PTPN18-201ENST00000175756 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
PTPN18-201ENST00000175756 SALL2Q9Y467 1007 aaPredicted RBP23.52■■□□□ 1.36
PTPN18-201ENST00000175756 NBR1Q14596 966 aa23.52■■□□□ 1.35
PTPN18-201ENST00000175756 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.35
PTPN18-201ENST00000175756 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
PTPN18-201ENST00000175756 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
PTPN18-201ENST00000175756 CUX1P39880 1505 aa23.47■■□□□ 1.35
PTPN18-201ENST00000175756 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
PTPN18-201ENST00000175756 LRRC9Q6ZRR7 1453 aa23.42■■□□□ 1.34
PTPN18-201ENST00000175756 NPM2Q86SE8 214 aaKnown RBP23.41■■□□□ 1.34
PTPN18-201ENST00000175756 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.34
PTPN18-201ENST00000175756 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
PTPN18-201ENST00000175756 PPP4R2Q9NY27 417 aa23.36■■□□□ 1.33
PTPN18-201ENST00000175756 RTL5Q5HYW3 569 aaPredicted RBP23.35■■□□□ 1.33
PTPN18-201ENST00000175756 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
PTPN18-201ENST00000175756 FBLN2P98095 1184 aa23.34■■□□□ 1.33
PTPN18-201ENST00000175756 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.33
PTPN18-201ENST00000175756 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
PTPN18-201ENST00000175756 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
PTPN18-201ENST00000175756 CCDC184Q52MB2 194 aa23.3■■□□□ 1.32
PTPN18-201ENST00000175756 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
PTPN18-201ENST00000175756 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
PTPN18-201ENST00000175756 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
PTPN18-201ENST00000175756 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
PTPN18-201ENST00000175756 MPHOSPH9Q99550 1183 aa23.27■■□□□ 1.32
PTPN18-201ENST00000175756 ANP32AP39687 249 aaKnown RBP23.27■■□□□ 1.32
PTPN18-201ENST00000175756 CCDC18Q5T9S5 1454 aa23.26■■□□□ 1.31
PTPN18-201ENST00000175756 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
PTPN18-201ENST00000175756 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
PTPN18-201ENST00000175756 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
PTPN18-201ENST00000175756 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
PTPN18-201ENST00000175756 CFTRP13569 1480 aa23.22■■□□□ 1.31
PTPN18-201ENST00000175756 MSH5O43196 834 aa23.2■■□□□ 1.31
PTPN18-201ENST00000175756 FGD6Q6ZV73 1430 aa23.19■■□□□ 1.3
PTPN18-201ENST00000175756 FMN1Q68DA7 1419 aa23.17■■□□□ 1.3
PTPN18-201ENST00000175756 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
PTPN18-201ENST00000175756 ZBTB47Q9UFB7 747 aaPredicted RBP23.14■■□□□ 1.29
PTPN18-201ENST00000175756 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
PTPN18-201ENST00000175756 DAXXQ9UER7 740 aaPredicted RBP23.1■■□□□ 1.29
PTPN18-201ENST00000175756 UACAQ9BZF9 1416 aa23.1■■□□□ 1.29
PTPN18-201ENST00000175756 DEKP35659 375 aaKnown RBP23.09■■□□□ 1.29
PTPN18-201ENST00000175756 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
PTPN18-201ENST00000175756 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.29
PTPN18-201ENST00000175756 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
PTPN18-201ENST00000175756 CFDP1Q9UEE9 299 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-201ENST00000175756 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
PTPN18-201ENST00000175756 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
PTPN18-201ENST00000175756 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
PTPN18-201ENST00000175756 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
PTPN18-201ENST00000175756 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
PTPN18-201ENST00000175756 FANCIQ9NVI1 1328 aa23.01■■□□□ 1.27
PTPN18-201ENST00000175756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.272e-8■■■□□ 14.6
PTPN18-201ENST00000175756 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
PTPN18-201ENST00000175756 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
PTPN18-201ENST00000175756 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
PTPN18-201ENST00000175756 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
PTPN18-201ENST00000175756 PKD2Q13563 968 aa22.98■■□□□ 1.27
PTPN18-201ENST00000175756 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
PTPN18-201ENST00000175756 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
PTPN18-201ENST00000175756 KIF7Q2M1P5 1343 aa22.97■■□□□ 1.27
PTPN18-201ENST00000175756 NAIPQ13075 1403 aa22.96■■□□□ 1.27
PTPN18-201ENST00000175756 CCDC7Q96M83 1385 aa22.95■■□□□ 1.27
PTPN18-201ENST00000175756 HFM1A2PYH4 1435 aa22.95■■□□□ 1.26
PTPN18-201ENST00000175756 ERICH6BQ5W0A0 696 aa22.95■■□□□ 1.26
PTPN18-201ENST00000175756 ZBED9Q6R2W3 1325 aa22.95■■□□□ 1.26
PTPN18-201ENST00000175756 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
PTPN18-201ENST00000175756 MYT1LQ9UL68 1186 aa22.93■■□□□ 1.26
PTPN18-201ENST00000175756 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
PTPN18-201ENST00000175756 NESP48681 1621 aa22.92■■□□□ 1.26
PTPN18-201ENST00000175756 DCAF11Q8TEB1 546 aa22.92■■□□□ 1.26
PTPN18-201ENST00000175756 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.262e-12■■■■■ 52
PTPN18-201ENST00000175756 RTN4Q9NQC3 1192 aaKnown RBP22.91■■□□□ 1.26
PTPN18-201ENST00000175756 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
PTPN18-201ENST00000175756 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms