RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 MAP3K1Q13233 1512 aa39.22■■■■□ 3.87
RTN4R-201ENST00000043402 P3H3Q8IVL6 736 aa39.22■■■■□ 3.87
RTN4R-201ENST00000043402 FHAD1B1AJZ9 1412 aa39.19■■■■□ 3.86
RTN4R-201ENST00000043402 EFCAB5A4FU69 1503 aa39.16■■■■□ 3.86
RTN4R-201ENST00000043402 FHOD3Q2V2M9 1422 aa39.15■■■■□ 3.86
RTN4R-201ENST00000043402 MRC2Q9UBG0 1479 aa39.13■■■■□ 3.85
RTN4R-201ENST00000043402 PCF11O94913 1555 aaKnown RBP39.13■■■■□ 3.85
RTN4R-201ENST00000043402 LRRC9Q6ZRR7 1453 aa39.06■■■■□ 3.84
RTN4R-201ENST00000043402 CCNB3Q8WWL7 1395 aa39.04■■■■□ 3.84
RTN4R-201ENST00000043402 CFAP43Q8NDM7 1665 aa39.01■■■■□ 3.84
RTN4R-201ENST00000043402 PBRM1Q86U86 1689 aa38.97■■■■□ 3.83
RTN4R-201ENST00000043402 FYCO1Q9BQS8 1478 aa38.97■■■■□ 3.83
RTN4R-201ENST00000043402 AQRO60306 1485 aaKnown RBP eCLIP38.96■■■■□ 3.83
RTN4R-201ENST00000043402 CASKIN1Q8WXD9 1431 aa38.95■■■■□ 3.83
RTN4R-201ENST00000043402 SAMD9Q5K651 1589 aa38.93■■■■□ 3.82
RTN4R-201ENST00000043402 ATP1B4Q9UN42 357 aaPredicted RBP38.91■■■■□ 3.82
RTN4R-201ENST00000043402 WDR62O43379 1518 aa38.88■■■■□ 3.81
RTN4R-201ENST00000043402 FMN1Q68DA7 1419 aa38.88■■■■□ 3.81
RTN4R-201ENST00000043402 PHLDB1Q86UU1 1377 aa38.87■■■■□ 3.81
RTN4R-201ENST00000043402 SNAPC4Q5SXM2 1469 aa38.84■■■■□ 3.81
RTN4R-201ENST00000043402 ADAMTS12P58397 1594 aa38.81■■■■□ 3.8
RTN4R-201ENST00000043402 DHX57Q6P158 1386 aaKnown RBP38.81■■■■□ 3.8
RTN4R-201ENST00000043402 IFT140Q96RY7 1462 aa38.79■■■■□ 3.8
RTN4R-201ENST00000043402 ZNF608Q9ULD9 1512 aaPredicted RBP38.78■■■■□ 3.8
RTN4R-201ENST00000043402 GRIN2BQ13224 1484 aa38.78■■■■□ 3.8
RTN4R-201ENST00000043402 ITGAEP38570 1179 aa38.75■■■■□ 3.79
RTN4R-201ENST00000043402 CLSPNQ9HAW4 1339 aa38.69■■■■□ 3.78
RTN4R-201ENST00000043402 LRRIQ1Q96JM4 1722 aa38.67■■■■□ 3.78
RTN4R-201ENST00000043402 ERCC6Q03468 1493 aa38.64■■■■□ 3.78
RTN4R-201ENST00000043402 IQGAP2Q13576 1575 aa38.63■■■■□ 3.77
RTN4R-201ENST00000043402 ZNF316A6NFI3 1004 aaPredicted RBP38.59■■■■□ 3.77
RTN4R-201ENST00000043402 DIEXFQ68CQ4 756 aaKnown RBP38.59■■■■□ 3.77
RTN4R-201ENST00000043402 FAM50AQ14320 339 aaKnown RBP38.57■■■■□ 3.77
RTN4R-201ENST00000043402 THOC2Q8NI27 1593 aaKnown RBP38.57■■■■□ 3.76
RTN4R-201ENST00000043402 RAB3GAP2Q9H2M9 1393 aa38.54■■■■□ 3.76
RTN4R-201ENST00000043402 EIF4G3O43432 1585 aaKnown RBP38.53■■■■□ 3.76
RTN4R-201ENST00000043402 MTUS2Q5JR59 1369 aa38.51■■■■□ 3.75
RTN4R-201ENST00000043402 SETD5Q9C0A6 1442 aa38.45■■■■□ 3.75
RTN4R-201ENST00000043402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.45■■■■□ 3.75
RTN4R-201ENST00000043402 UGGT2Q9NYU1 1516 aa38.43■■■■□ 3.74
RTN4R-201ENST00000043402 FGD6Q6ZV73 1430 aa38.41■■■■□ 3.74
RTN4R-201ENST00000043402 GRIN2AQ12879 1464 aa38.37■■■■□ 3.73
RTN4R-201ENST00000043402 KIAA0586Q9BVV6 1533 aa38.37■■■■□ 3.73
RTN4R-201ENST00000043402 NCOA2Q15596 1464 aa38.36■■■■□ 3.73
RTN4R-201ENST00000043402 EHBP1L1Q8N3D4 1523 aa38.35■■■■□ 3.73
RTN4R-201ENST00000043402 MAGI3Q5TCQ9 1506 aa38.35■■■■□ 3.73
RTN4R-201ENST00000043402 CCDC18Q5T9S5 1454 aa38.34■■■■□ 3.73
RTN4R-201ENST00000043402 HECW1Q76N89 1606 aa38.34■■■■□ 3.73
RTN4R-201ENST00000043402 SUPT6HQ7KZ85 1726 aaKnown RBP38.32■■■■□ 3.72
RTN4R-201ENST00000043402 MAPKBP1O60336 1514 aa38.29■■■■□ 3.72
RTN4R-201ENST00000043402 MAGI1Q96QZ7 1491 aaPredicted RBP38.28■■■■□ 3.72
RTN4R-201ENST00000043402 EPRSP07814 1512 aaKnown RBP38.27■■■■□ 3.72
RTN4R-201ENST00000043402 MYOM3Q5VTT5 1437 aa38.27■■■■□ 3.72
RTN4R-201ENST00000043402 DISP1Q96F81 1524 aa38.27■■■■□ 3.72
RTN4R-201ENST00000043402 ARHGEF11O15085 1522 aa38.25■■■■□ 3.71
RTN4R-201ENST00000043402 KIAA0556O60303 1618 aa38.24■■■■□ 3.71
RTN4R-201ENST00000043402 CDK13Q14004 1512 aaKnown RBP38.19■■■■□ 3.7
RTN4R-201ENST00000043402 SYNJ2O15056 1496 aa38.19■■■■□ 3.7
RTN4R-201ENST00000043402 PTPRKQ15262 1439 aa38.17■■■■□ 3.7
RTN4R-201ENST00000043402 CHMP7Q8WUX9 453 aaPredicted RBP38.16■■■■□ 3.7
RTN4R-201ENST00000043402 CEP170Q5SW79 1584 aa38.15■■■■□ 3.7
RTN4R-201ENST00000043402 PTPN23Q9H3S7 1636 aa38.1■■■■□ 3.69
RTN4R-201ENST00000043402 ARID3CA6NKF2 412 aa38.09■■■■□ 3.69
RTN4R-201ENST00000043402 FBLN2P98095 1184 aa38.05■■■■□ 3.68
RTN4R-201ENST00000043402 HFM1A2PYH4 1435 aa38.03■■■■□ 3.68
RTN4R-201ENST00000043402 NUP153P49790 1475 aaKnown RBP38.01■■■■□ 3.68
RTN4R-201ENST00000043402 NUP160Q12769 1436 aa38■■■■□ 3.67
RTN4R-201ENST00000043402 TCOF1Q13428 1488 aaKnown RBP37.99■■■■□ 3.67
RTN4R-201ENST00000043402 RAPGEF6Q8TEU7 1601 aa37.99■■■■□ 3.67
RTN4R-201ENST00000043402 SIN3AQ96ST3 1273 aa37.95■■■■□ 3.66
RTN4R-201ENST00000043402 NAIPQ13075 1403 aa37.94■■■■□ 3.66
RTN4R-201ENST00000043402 MIA2Q96PC5 1412 aa37.9■■■■□ 3.66
RTN4R-201ENST00000043402 MIER1Q8N108 512 aa37.88■■■■□ 3.65
RTN4R-201ENST00000043402 JPH4Q96JJ6 628 aa37.88■■■■□ 3.65
RTN4R-201ENST00000043402 NEUROD1Q13562 356 aa37.85■■■■□ 3.65
RTN4R-201ENST00000043402 PLB1Q6P1J6 1458 aa37.83■■■■□ 3.65
RTN4R-201ENST00000043402 UACAQ9BZF9 1416 aa37.83■■■■□ 3.65
RTN4R-201ENST00000043402 CARMIL2Q6F5E8 1435 aa37.81■■■■□ 3.64
RTN4R-201ENST00000043402 CHIC2Q9UKJ5 165 aa37.76■■■■□ 3.64
RTN4R-201ENST00000043402 CDK11AQ9UQ88 783 aaPredicted RBP37.75■■■■□ 3.63
RTN4R-201ENST00000043402 RRP7BPQ9NSQ0 103 aa37.74■■■■□ 3.63
RTN4R-201ENST00000043402 TIMELESSQ9UNS1 1208 aa37.72■■■■□ 3.63
RTN4R-201ENST00000043402 GCC2Q8IWJ2 1684 aa37.71■■■■□ 3.63
RTN4R-201ENST00000043402 ACIN1Q9UKV3 1341 aaKnown RBP37.7■■■■□ 3.63
RTN4R-201ENST00000043402 PRG4Q92954 1404 aaPredicted RBP37.7■■■■□ 3.63
RTN4R-201ENST00000043402 SCAF1Q9H7N4 1312 aaKnown RBP37.69■■■■□ 3.62
RTN4R-201ENST00000043402 AKNAQ7Z591 1439 aa37.69■■■■□ 3.62
RTN4R-201ENST00000043402 TROQ12816 1431 aaPredicted RBP37.68■■■■□ 3.62
RTN4R-201ENST00000043402 KDM6BO15054 1643 aa37.62■■■■□ 3.61
RTN4R-201ENST00000043402 ZNF644Q9H582 1327 aaPredicted RBP37.61■■■■□ 3.61
RTN4R-201ENST00000043402 CENPBP07199 599 aaPredicted RBP37.6■■■■□ 3.61
RTN4R-201ENST00000043402 ABCA8O94911 1581 aa37.59■■■■□ 3.61
RTN4R-201ENST00000043402 DAPK1P53355 1430 aa37.59■■■■□ 3.61
RTN4R-201ENST00000043402 PPP1R15AO75807 674 aaPredicted RBP37.58■■■■□ 3.61
RTN4R-201ENST00000043402 DNMT1P26358 1616 aaKnown RBP37.57■■■■□ 3.6
RTN4R-201ENST00000043402 ABCC5O15440 1437 aa37.56■■■■□ 3.6
RTN4R-201ENST00000043402 KIF14Q15058 1648 aa37.56■■■■□ 3.6
RTN4R-201ENST00000043402 ADCY10Q96PN6 1610 aa37.55■■■■□ 3.6
RTN4R-201ENST00000043402 CHD1O14646 1710 aa37.52■■■■□ 3.6
RTN4R-201ENST00000043402 DENND4BO75064 1496 aaPredicted RBP37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms