RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Arap1Q4LDD4 1452 aa19.06■□□□□ 0.64
Prpf40a-206ENSMUST00000209364 Erich3F6QRE9 1637 aa19.06■□□□□ 0.64
Prpf40a-206ENSMUST00000209364 SynmQ70IV5 1561 aa19.04■□□□□ 0.64
Prpf40a-206ENSMUST00000209364 Ankrd26Q811D2 1581 aa19.03■□□□□ 0.64
Prpf40a-206ENSMUST00000209364 Setd5Q5XJV7 1441 aa19.02■□□□□ 0.64
Prpf40a-206ENSMUST00000209364 Mier1Q5UAK0 511 aa19.02■□□□□ 0.64
Prpf40a-206ENSMUST00000209364 Carmil1Q6EDY6 1374 aa19.02■□□□□ 0.63
Prpf40a-206ENSMUST00000209364 Arhgef5E9Q7D5 1581 aa19.01■□□□□ 0.63
Prpf40a-206ENSMUST00000209364 UbtfP25976 765 aaKnown RBP19.01■□□□□ 0.63
Prpf40a-206ENSMUST00000209364 Plekhg3Q4VAC9 1341 aa18.96■□□□□ 0.63
Prpf40a-206ENSMUST00000209364 Sall2Q9QX96 1004 aa18.96■□□□□ 0.63
Prpf40a-206ENSMUST00000209364 Cux1P53564 1515 aa18.94■□□□□ 0.62
Prpf40a-206ENSMUST00000209364 Rad54l2Q99NG0 1466 aa18.94■□□□□ 0.62
Prpf40a-206ENSMUST00000209364 Lmo7E9PYF4 1699 aaKnown RBP18.91■□□□□ 0.62
Prpf40a-206ENSMUST00000209364 Tiam1Q60610 1591 aa18.91■□□□□ 0.62
Prpf40a-206ENSMUST00000209364 Pcf11G3X9Z4 1553 aa18.9■□□□□ 0.62
Prpf40a-206ENSMUST00000209364 Polr1aO35134 1717 aaKnown RBP18.9■□□□□ 0.62
Prpf40a-206ENSMUST00000209364 Plb1Q3TTY0 1478 aa18.89■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 Ap3b1Q9Z1T1 1105 aa18.88■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 Urb2E9Q7L1 1524 aaKnown RBP18.87■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 NefmP08553 848 aa18.85■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 Pla2r1Q62028 1487 aa18.85■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 Magi3Q9EQJ9 1476 aa18.84■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 Fyco1Q8VDC1 1437 aa18.84■□□□□ 0.61
Prpf40a-206ENSMUST00000209364 Naip1Q9QWK5 1403 aa18.82■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Rpap1Q80TE0 1409 aa18.81■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Setd1bQ8CFT2 1985 aa18.8■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Slx4Q6P1D7 1565 aa18.8■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Disp1Q3TDN0 1521 aa18.8■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Grin2aP35436 1464 aa18.8■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Ncapd3Q6ZQK0 1506 aa18.79■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 EprsQ8CGC7 1512 aaKnown RBP18.79■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Lrriq1Q0P5X1 1673 aa18.79■□□□□ 0.6
Prpf40a-206ENSMUST00000209364 Peg3Q3URU2 1571 aa18.76■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 Pbrm1Q8BSQ9 1634 aaKnown RBP18.76■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 CntlnA2AM05 1397 aa18.75■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 Ift140E9PY46 1464 aa18.75■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 Gpatch8A2A6A1 1505 aa18.74■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 Abca5Q8K448 1642 aa18.73■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 BlmO88700 1416 aa18.73■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 Adamts12Q811B3 1600 aa18.71■□□□□ 0.59
Prpf40a-206ENSMUST00000209364 Gm38655A0A286YDK6 273 aa18.7■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 WizO88286 1684 aaKnown RBP18.7■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 PrkcshO08795 521 aa18.69■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 CadpsQ80TJ1 1355 aa18.68■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 Nup160Q9Z0W3 1402 aaKnown RBP18.68■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 Cdk11bP24788 784 aaKnown RBP18.67■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 Aebp1Q640N1 1128 aa18.67■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 Gm7298A0A0N4SVU1 1476 aa18.66■□□□□ 0.58
Prpf40a-206ENSMUST00000209364 Abca16E9PWJ7 1678 aa18.63■□□□□ 0.57
Prpf40a-206ENSMUST00000209364 TchhA0A0B4J1F9 1599 aa18.62■□□□□ 0.57
Prpf40a-206ENSMUST00000209364 Gm1043A0A140LJC2 1431 aa18.6■□□□□ 0.57
Prpf40a-206ENSMUST00000209364 Soga1E1U8D0 1418 aa18.58■□□□□ 0.57
Prpf40a-206ENSMUST00000209364 PxdnQ3UQ28 1475 aa18.58■□□□□ 0.56
Prpf40a-206ENSMUST00000209364 Lmod2Q3UHZ5 550 aa18.58■□□□□ 0.56
Prpf40a-206ENSMUST00000209364 Nop58Q6DFW4 536 aaKnown RBP18.57■□□□□ 0.56
Prpf40a-206ENSMUST00000209364 Cc2d2bA0A286YDU8 1405 aa18.56■□□□□ 0.56
Prpf40a-206ENSMUST00000209364 Kdm5bQ80Y84 1544 aa18.54■□□□□ 0.56
Prpf40a-206ENSMUST00000209364 Fam71e1A1L3C1 212 aa18.51■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 Rusc2Q80U22 1514 aa18.5■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 Eif4g3Q80XI3 1579 aaKnown RBP18.49■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 Amer1Q7TS75 1132 aa18.49■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 Kif27Q7M6Z4 1394 aa18.49■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 3425401B19RikD3Z1D3 1412 aa18.49■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 Abcc2Q8VI47 1543 aa18.48■□□□□ 0.55
Prpf40a-206ENSMUST00000209364 Lmtk2Q3TYD6 1471 aa18.44■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 WrnO09053 1401 aa18.43■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 Ifnlr1Q8CGK5 535 aa18.42■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 Gcc2Q8CHG3 1679 aa18.41■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 BC005561E9Q5E2 1589 aa18.41■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 Shroom2A2ALU4 1481 aa18.41■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 Arhgap27A2AB59 869 aa18.4■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 Wdr66E9Q743 1299 aa18.4■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 Rapgef6Q5NCJ1 1609 aa18.4■□□□□ 0.54
Prpf40a-206ENSMUST00000209364 NexmifQ5DTT1 1515 aa18.38■□□□□ 0.53
Prpf40a-206ENSMUST00000209364 Ccnb3Q810T2 1396 aa18.38■□□□□ 0.53
Prpf40a-206ENSMUST00000209364 Map3k4O08648 1597 aa18.35■□□□□ 0.53
Prpf40a-206ENSMUST00000209364 Fam50aQ9WV03 339 aaKnown RBP18.35■□□□□ 0.53
Prpf40a-206ENSMUST00000209364 TonslQ6NZL6 1363 aa18.33■□□□□ 0.53
Prpf40a-206ENSMUST00000209364 Dnmt1P13864 1620 aaKnown RBP18.33■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 A2mQ6GQT1 1474 aa18.32■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Mia2Q91ZV0 1396 aa18.32■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Fhad1A6PWD2 1420 aa18.32■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Naip2Q9QUK4 1447 aa18.32■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Aebp2Q9Z248 504 aaKnown RBP18.32■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Mug1P28665 1476 aa18.31■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Arhgef11Q68FM7 1552 aa18.31■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 ClspnQ80YR7 1315 aa18.31■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Vps8Q0P5W1 1427 aa18.28■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Ncoa3O09000 1398 aa18.28■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Cdc42bpaQ3UU96 1719 aa18.28■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Zcchc11B2RX14 1644 aaKnown RBP18.28■□□□□ 0.52
Prpf40a-206ENSMUST00000209364 Arhgap31A6X8Z5 1425 aa18.25■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Ncoa2Q61026 1462 aa18.23■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Mapk8ip2Q9ERE9 830 aa18.23■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Ccdc141E9Q8Q6 1531 aa18.23■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Kiaa1551Q5DTW7 1521 aa18.22■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Neo1P97798 1493 aa18.22■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Mroh2aD3Z750 1679 aa18.21■□□□□ 0.51
Prpf40a-206ENSMUST00000209364 Eid3Q3V124 375 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms