RNA–Protein interactions for RNA: ENSMUST00000192804.1

Trbv28-201, mousemouse

BASIC

Gene Trbv28, Length 264 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv28-201ENSMUST00000192804 Pdap1Q3UHX2 181 aaKnown RBP12.73□□□□□ -0.37
Trbv28-201ENSMUST00000192804 Atad2Q8CDM1 1040 aa12.7□□□□□ -0.38
Trbv28-201ENSMUST00000192804 Gm13697A2AK42 830 aa12.68□□□□□ -0.38
Trbv28-201ENSMUST00000192804 Repin1Q5U4E2 545 aa12.68□□□□□ -0.38
Trbv28-201ENSMUST00000192804 OsbpQ3B7Z2 805 aa12.67□□□□□ -0.38
Trbv28-201ENSMUST00000192804 Fam117bQ3U3E2 584 aa12.66□□□□□ -0.38
Trbv28-201ENSMUST00000192804 Kiaa1522A2A7S8 1013 aa12.63□□□□□ -0.39
Trbv28-201ENSMUST00000192804 Dmrta2A2A9A2 531 aa12.58□□□□□ -0.4
Trbv28-201ENSMUST00000192804 Arhgef1Q61210 920 aaKnown RBP12.58□□□□□ -0.4
Trbv28-201ENSMUST00000192804 Gm45233A0A0N4SVE0 221 aa12.55□□□□□ -0.4
Trbv28-201ENSMUST00000192804 Taok2Q6ZQ29 1240 aa12.54□□□□□ -0.4
Trbv28-201ENSMUST00000192804 Prdm16A2A935 1275 aa12.52□□□□□ -0.41
Trbv28-201ENSMUST00000192804 Spock2Q9ER58 423 aa12.52□□□□□ -0.41
Trbv28-201ENSMUST00000192804 Chrm1P12657 460 aa12.48□□□□□ -0.41
Trbv28-201ENSMUST00000192804 Arid3aQ62431 601 aa12.47□□□□□ -0.41
Trbv28-201ENSMUST00000192804 Znf579Q80VM4 562 aa12.47□□□□□ -0.41
Trbv28-201ENSMUST00000192804 ZxdbA2CE44 873 aa12.45□□□□□ -0.42
Trbv28-201ENSMUST00000192804 Tulp1Q9Z273 543 aa12.45□□□□□ -0.42
Trbv28-201ENSMUST00000192804 Znf516Q7TSH3 1157 aa12.42□□□□□ -0.42
Trbv28-201ENSMUST00000192804 Ndufv2Q9D6J6 248 aa12.4□□□□□ -0.42
Trbv28-201ENSMUST00000192804 Rnf225Q9D7D1 332 aa12.38□□□□□ -0.43
Trbv28-201ENSMUST00000192804 Bclaf1Q8K019 919 aaKnown RBP12.37□□□□□ -0.43
Trbv28-201ENSMUST00000192804 Ppp6r1Q7TSI3 856 aa12.36□□□□□ -0.43
Trbv28-201ENSMUST00000192804 Pak3Q61036 559 aa12.35□□□□□ -0.43
Trbv28-201ENSMUST00000192804 C1qbpO35658 278 aa12.34□□□□□ -0.43
Trbv28-201ENSMUST00000192804 Lhx8O35652 367 aa12.31□□□□□ -0.44
Trbv28-201ENSMUST00000192804 Prim1P20664 417 aa12.31□□□□□ -0.44
Trbv28-201ENSMUST00000192804 Ferd3lQ923Z4 168 aa12.31□□□□□ -0.44
Trbv28-201ENSMUST00000192804 Kank4Q6P9J5 1016 aa12.3□□□□□ -0.44
Trbv28-201ENSMUST00000192804 Jph4Q80WT0 628 aa12.26□□□□□ -0.45
Trbv28-201ENSMUST00000192804 Dcbld2Q91ZV3 769 aa12.26□□□□□ -0.45
Trbv28-201ENSMUST00000192804 Skap1Q3UUV5 355 aa12.23□□□□□ -0.45
Trbv28-201ENSMUST00000192804 Pcdhb17Q91VD8 799 aa12.21□□□□□ -0.45
Trbv28-201ENSMUST00000192804 Fam181bQ80VF6 417 aa12.19□□□□□ -0.46
Trbv28-201ENSMUST00000192804 Zbtb22Q9Z0G7 638 aa12.16□□□□□ -0.46
Trbv28-201ENSMUST00000192804 TimelessQ9R1X4 1197 aa12.15□□□□□ -0.46
Trbv28-201ENSMUST00000192804 Fndc3aQ8BX90 1198 aa12.12□□□□□ -0.47
Trbv28-201ENSMUST00000192804 Slc24a1Q91WD8 1130 aa12.12□□□□□ -0.47
Trbv28-201ENSMUST00000192804 Evi5P97366 809 aa12.09□□□□□ -0.47
Trbv28-201ENSMUST00000192804 Slc4a2P13808 1237 aaKnown RBP12.04□□□□□ -0.48
Trbv28-201ENSMUST00000192804 Krtap4-1Q3UUY3 169 aa12.04□□□□□ -0.48
Trbv28-201ENSMUST00000192804 Actn4P57780 912 aaKnown RBP12.02□□□□□ -0.49
Trbv28-201ENSMUST00000192804 St18Q80TY4 1045 aa12.02□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Msh5Q9QUM7 833 aa12.02□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Rsph6aQ8CDR2 708 aa12□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Scnn1bQ9WU38 638 aa12□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Dkk1O54908 272 aa11.97□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Nap1l5Q9JJF0 156 aa11.97□□□□□ -0.49
Trbv28-201ENSMUST00000192804 E9Q0B3 247 aa11.96□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Zeb1Q64318 1117 aa11.96□□□□□ -0.49
Trbv28-201ENSMUST00000192804 Esf1Q3V1V3 845 aaKnown RBP11.95□□□□□ -0.5
Trbv28-201ENSMUST00000192804 PsdQ5DTT2 1024 aa11.93□□□□□ -0.5
Trbv28-201ENSMUST00000192804 Stk3Q9JI10 497 aa11.93□□□□□ -0.5
Trbv28-201ENSMUST00000192804 Fkbp4P30416 458 aa11.91□□□□□ -0.5
Trbv28-201ENSMUST00000192804 Ier5lQ99J55 406 aa11.91□□□□□ -0.5
Trbv28-201ENSMUST00000192804 Axin1O35625 863 aa11.9□□□□□ -0.5
Trbv28-201ENSMUST00000192804 Cypt1Q8CH20 168 aa11.9□□□□□ -0.5
Trbv28-201ENSMUST00000192804 Mkrn3Q60764 544 aa11.89□□□□□ -0.51
Trbv28-201ENSMUST00000192804 Scarf1Q5ND28 820 aa11.88□□□□□ -0.51
Trbv28-201ENSMUST00000192804 Hmx1O70218 332 aa11.87□□□□□ -0.51
Trbv28-201ENSMUST00000192804 EdaraddQ8VHX2 208 aa11.87□□□□□ -0.51
Trbv28-201ENSMUST00000192804 Ankrd65F6YK91 380 aa11.86□□□□□ -0.51
Trbv28-201ENSMUST00000192804 Pdzrn4E9PUZ9 1014 aa11.84□□□□□ -0.51
Trbv28-201ENSMUST00000192804 Rgl2Q61193 778 aa11.84□□□□□ -0.51
Trbv28-201ENSMUST00000192804 Tox2A2A472 547 aa11.83□□□□□ -0.52
Trbv28-201ENSMUST00000192804 P3h3Q8CG70 732 aa11.83□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Stk24Q99KH8 431 aa11.82□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Noa1Q9JJG9 693 aaKnown RBP11.82□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Stk25Q9Z2W1 426 aa11.81□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Irx5Q9JKQ4 484 aa11.79□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Apba1B2RUJ5 842 aa11.78□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Mier1Q5UAK0 511 aa11.78□□□□□ -0.52
Trbv28-201ENSMUST00000192804 Pelp1Q9DBD5 1123 aaKnown RBP11.76□□□□□ -0.53
Trbv28-201ENSMUST00000192804 UncxO08934 530 aa11.75□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Otop3Q80UF9 577 aa11.75□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Pcdh10E9PXQ7 1057 aa11.73□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Kdm2aP59997 1161 aa11.73□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Spryd3E9Q9B3 442 aa11.72□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Adnp2Q8CHC8 1165 aaKnown RBP11.72□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Erich4Q3UNU4 136 aa11.71□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Dnm1lQ8K1M6 742 aa11.71□□□□□ -0.53
Trbv28-201ENSMUST00000192804 Ubap1lG3UW59 384 aa11.7□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Neurod1Q60867 357 aa11.69□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Dnajc5P60904 198 aa11.68□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Gga1Q8R0H9 635 aa11.68□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Lce6aD3YV94 81 aa11.67□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Vsig10D3YX43 558 aa11.66□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Map4k4P97820 1233 aaKnown RBP11.65□□□□□ -0.54
Trbv28-201ENSMUST00000192804 Sgip1Q8VD37 806 aa11.63□□□□□ -0.55
Trbv28-201ENSMUST00000192804 Sptlc1O35704 473 aa11.62□□□□□ -0.55
Trbv28-201ENSMUST00000192804 Onecut3Q8K557 490 aa11.61□□□□□ -0.55
Trbv28-201ENSMUST00000192804 Sall2Q9QX96 1004 aa11.61□□□□□ -0.55
Trbv28-201ENSMUST00000192804 ElnP54320 860 aa11.6□□□□□ -0.55
Trbv28-201ENSMUST00000192804 Mnx1Q9QZW9 404 aa11.6□□□□□ -0.55
Trbv28-201ENSMUST00000192804 Cnksr2Q80YA9 1032 aa11.55□□□□□ -0.56
Trbv28-201ENSMUST00000192804 Hoxa2P31245 372 aa11.54□□□□□ -0.56
Trbv28-201ENSMUST00000192804 ChgaP26339 463 aaKnown RBP11.52□□□□□ -0.57
Trbv28-201ENSMUST00000192804 Thap8E9Q695 213 aa11.5□□□□□ -0.57
Trbv28-201ENSMUST00000192804 Tmem132aQ922P8 1018 aa11.48□□□□□ -0.57
Trbv28-201ENSMUST00000192804 1700006A11RikB9EHI3 544 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms