RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 Wdr62Q3U3T8 1523 aa13.97□□□□□ -0.17
Msh4-203ENSMUST00000188338 Frmpd1A2AKB4 1549 aa13.94□□□□□ -0.18
Msh4-203ENSMUST00000188338 TnnQ80Z71 1560 aa13.93□□□□□ -0.18
Msh4-203ENSMUST00000188338 BlmO88700 1416 aa13.9□□□□□ -0.18
Msh4-203ENSMUST00000188338 AqrQ8CFQ3 1481 aaKnown RBP13.89□□□□□ -0.19
Msh4-203ENSMUST00000188338 ArxO35085 564 aa13.88□□□□□ -0.19
Msh4-203ENSMUST00000188338 NrkQ9R0G8 1455 aa13.87□□□□□ -0.19
Msh4-203ENSMUST00000188338 Arhgef5E9Q7D5 1581 aa13.87□□□□□ -0.19
Msh4-203ENSMUST00000188338 Shroom4Q1W617 1475 aa13.85□□□□□ -0.19
Msh4-203ENSMUST00000188338 NclP09405 707 aaKnown RBP13.83□□□□□ -0.2
Msh4-203ENSMUST00000188338 SafbD3YXK2 937 aaKnown RBP13.82□□□□□ -0.2
Msh4-203ENSMUST00000188338 Hnrnpul2Q00PI9 745 aaKnown RBP13.82□□□□□ -0.2
Msh4-203ENSMUST00000188338 Phldb1Q6PDH0 1371 aaKnown RBP13.81□□□□□ -0.2
Msh4-203ENSMUST00000188338 Camsap1A2AHC3 1581 aa13.81□□□□□ -0.2
Msh4-203ENSMUST00000188338 Lamc3Q9R0B6 1581 aa13.81□□□□□ -0.2
Msh4-203ENSMUST00000188338 Kdm5bQ80Y84 1544 aa13.8□□□□□ -0.2
Msh4-203ENSMUST00000188338 Ccdc18Q640L5 1455 aa13.79□□□□□ -0.2
Msh4-203ENSMUST00000188338 Naip1Q9QWK5 1403 aa13.79□□□□□ -0.2
Msh4-203ENSMUST00000188338 Unc13aQ4KUS2 1712 aa13.78□□□□□ -0.2
Msh4-203ENSMUST00000188338 Aplp2Q06335 707 aa13.78□□□□□ -0.2
Msh4-203ENSMUST00000188338 Tiam1Q60610 1591 aa13.77□□□□□ -0.21
Msh4-203ENSMUST00000188338 Slx4Q6P1D7 1565 aa13.76□□□□□ -0.21
Msh4-203ENSMUST00000188338 Hspa5P20029 655 aaKnown RBP13.76□□□□□ -0.21
Msh4-203ENSMUST00000188338 Grin2bQ01097 1482 aa13.75□□□□□ -0.21
Msh4-203ENSMUST00000188338 Pcf11G3X9Z4 1553 aa13.74□□□□□ -0.21
Msh4-203ENSMUST00000188338 Ankrd26Q811D2 1581 aa13.74□□□□□ -0.21
Msh4-203ENSMUST00000188338 Mroh2bQ7M6Y6 1581 aa13.73□□□□□ -0.21
Msh4-203ENSMUST00000188338 Npm1Q61937 292 aaKnown RBP13.73□□□□□ -0.21
Msh4-203ENSMUST00000188338 Slc24a1Q91WD8 1130 aa13.71□□□□□ -0.21
Msh4-203ENSMUST00000188338 Ubl4bQ9CQ84 188 aa13.7□□□□□ -0.22
Msh4-203ENSMUST00000188338 Map3k1P53349 1493 aa13.7□□□□□ -0.22
Msh4-203ENSMUST00000188338 Chic2Q9D9G3 165 aa13.7□□□□□ -0.22
Msh4-203ENSMUST00000188338 Mrc2Q64449 1479 aa13.69□□□□□ -0.22
Msh4-203ENSMUST00000188338 Cux2P70298 1426 aa13.69□□□□□ -0.22
Msh4-203ENSMUST00000188338 Cux1P53564 1515 aa13.68□□□□□ -0.22
Msh4-203ENSMUST00000188338 3425401B19RikD3Z1D3 1412 aa13.67□□□□□ -0.22
Msh4-203ENSMUST00000188338 Rpap1Q80TE0 1409 aa13.66□□□□□ -0.22
Msh4-203ENSMUST00000188338 Dnajc5P60904 198 aa13.66□□□□□ -0.22
Msh4-203ENSMUST00000188338 Sin3aQ60520 1274 aaKnown RBP13.66□□□□□ -0.22
Msh4-203ENSMUST00000188338 Gtf3c5Q8R2T8 520 aa13.65□□□□□ -0.22
Msh4-203ENSMUST00000188338 Erich3F6QRE9 1637 aa13.62□□□□□ -0.23
Msh4-203ENSMUST00000188338 Aebp1Q640N1 1128 aa13.6□□□□□ -0.23
Msh4-203ENSMUST00000188338 TchhA0A0B4J1F9 1599 aa13.59□□□□□ -0.23
Msh4-203ENSMUST00000188338 Carmil1Q6EDY6 1374 aa13.58□□□□□ -0.24
Msh4-203ENSMUST00000188338 Fam71e1A1L3C1 212 aa13.57□□□□□ -0.24
Msh4-203ENSMUST00000188338 Rad54l2Q99NG0 1466 aa13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 CntlnA2AM05 1397 aa13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 Lmo7E9PYF4 1699 aaKnown RBP13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 Pknox2Q8BG99 474 aa13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 Shroom2A2ALU4 1481 aa13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 LrpprcQ6PB66 1392 aaKnown RBP13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 Duox2A2AQ99 1517 aa13.56□□□□□ -0.24
Msh4-203ENSMUST00000188338 Dhx29Q6PGC1 1365 aaKnown RBP13.55□□□□□ -0.24
Msh4-203ENSMUST00000188338 Fyco1Q8VDC1 1437 aa13.54□□□□□ -0.24
Msh4-203ENSMUST00000188338 Znf710Q3U288 666 aa13.54□□□□□ -0.24
Msh4-203ENSMUST00000188338 Tnnt3Q9QZ47 272 aa13.52□□□□□ -0.25
Msh4-203ENSMUST00000188338 Urb2E9Q7L1 1524 aaKnown RBP13.51□□□□□ -0.25
Msh4-203ENSMUST00000188338 Gm7298A0A0N4SVU1 1476 aa13.51□□□□□ -0.25
Msh4-203ENSMUST00000188338 Efcab5A0JP43 1406 aa13.5□□□□□ -0.25
Msh4-203ENSMUST00000188338 PogzQ8BZH4 1409 aaKnown RBP13.5□□□□□ -0.25
Msh4-203ENSMUST00000188338 Samd9lQ69Z37 1561 aa13.49□□□□□ -0.25
Msh4-203ENSMUST00000188338 Gm1043A0A140LJC2 1431 aa13.49□□□□□ -0.25
Msh4-203ENSMUST00000188338 Eif4g3Q80XI3 1579 aaKnown RBP13.49□□□□□ -0.25
Msh4-203ENSMUST00000188338 Fhad1A6PWD2 1420 aa13.48□□□□□ -0.25
Msh4-203ENSMUST00000188338 Ccnb3Q810T2 1396 aa13.48□□□□□ -0.25
Msh4-203ENSMUST00000188338 Gm13697A2AK42 830 aa13.48□□□□□ -0.25
Msh4-203ENSMUST00000188338 Eif5bQ05D44 1216 aaKnown RBP13.48□□□□□ -0.25
Msh4-203ENSMUST00000188338 A2mQ6GQT1 1474 aa13.48□□□□□ -0.25
Msh4-203ENSMUST00000188338 Naip2Q9QUK4 1447 aa13.47□□□□□ -0.25
Msh4-203ENSMUST00000188338 Mia2Q91ZV0 1396 aa13.46□□□□□ -0.25
Msh4-203ENSMUST00000188338 Vps8Q0P5W1 1427 aa13.45□□□□□ -0.26
Msh4-203ENSMUST00000188338 UacaQ8CGB3 1411 aa13.45□□□□□ -0.26
Msh4-203ENSMUST00000188338 Lrriq1Q0P5X1 1673 aa13.45□□□□□ -0.26
Msh4-203ENSMUST00000188338 Zfp644E9QA22 1323 aa13.44□□□□□ -0.26
Msh4-203ENSMUST00000188338 SynmQ70IV5 1561 aa13.43□□□□□ -0.26
Msh4-203ENSMUST00000188338 Ccer2J3QPU5 274 aa13.42□□□□□ -0.26
Msh4-203ENSMUST00000188338 Ankrd36D3Z4K0 1415 aa13.41□□□□□ -0.26
Msh4-203ENSMUST00000188338 Stra8P70278 393 aa13.4□□□□□ -0.26
Msh4-203ENSMUST00000188338 TimelessQ9R1X4 1197 aa13.4□□□□□ -0.26
Msh4-203ENSMUST00000188338 Ifnlr1Q8CGK5 535 aa13.4□□□□□ -0.26
Msh4-203ENSMUST00000188338 BccipQ9CWI3 316 aa13.4□□□□□ -0.26
Msh4-203ENSMUST00000188338 Dennd4bQ3U1Y4 1499 aa13.39□□□□□ -0.27
Msh4-203ENSMUST00000188338 P3h3Q8CG70 732 aa13.39□□□□□ -0.27
Msh4-203ENSMUST00000188338 Calr4Q3TQS0 420 aa13.39□□□□□ -0.27
Msh4-203ENSMUST00000188338 Mphosph9A6H5Y1 991 aa13.38□□□□□ -0.27
Msh4-203ENSMUST00000188338 Cabp1Q9JLK7 227 aa13.38□□□□□ -0.27
Msh4-203ENSMUST00000188338 Kif27Q7M6Z4 1394 aa13.38□□□□□ -0.27
Msh4-203ENSMUST00000188338 Zcchc11B2RX14 1644 aaKnown RBP13.37□□□□□ -0.27
Msh4-203ENSMUST00000188338 Naip5Q9R016 1403 aa13.37□□□□□ -0.27
Msh4-203ENSMUST00000188338 Nolc1E9Q5C9 702 aaKnown RBP13.36□□□□□ -0.27
Msh4-203ENSMUST00000188338 Smg6P61406 1418 aaKnown RBP13.36□□□□□ -0.27
Msh4-203ENSMUST00000188338 Peg3Q3URU2 1571 aa13.35□□□□□ -0.27
Msh4-203ENSMUST00000188338 Mrs2Q5NCE8 434 aa13.35□□□□□ -0.27
Msh4-203ENSMUST00000188338 Wwc2Q6NXJ0 1187 aa13.35□□□□□ -0.27
Msh4-203ENSMUST00000188338 Rsph4aQ8BYM7 716 aa13.35□□□□□ -0.27
Msh4-203ENSMUST00000188338 EprsQ8CGC7 1512 aaKnown RBP13.35□□□□□ -0.27
Msh4-203ENSMUST00000188338 Crocc2F6XLV1 1638 aa13.34□□□□□ -0.27
Msh4-203ENSMUST00000188338 Gpatch8A2A6A1 1505 aa13.33□□□□□ -0.28
Msh4-203ENSMUST00000188338 Ncoa2Q61026 1462 aa13.32□□□□□ -0.28
Msh4-203ENSMUST00000188338 CadpsQ80TJ1 1355 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms