RNA–Protein interactions for RNA: ENSMUST00000185651.1

Trav1-202, Transcript of T cell receptor alpha variable 1 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav1, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1-202ENSMUST00000185651 Rad54l2Q99NG0 1466 aa12.29□□□□□ -0.44
Trav1-202ENSMUST00000185651 Alpk3Q924C5 1678 aa12.28□□□□□ -0.44
Trav1-202ENSMUST00000185651 Grin2aP35436 1464 aa12.27□□□□□ -0.44
Trav1-202ENSMUST00000185651 Plppr3Q7TPB0 716 aa12.26□□□□□ -0.45
Trav1-202ENSMUST00000185651 Magi3Q9EQJ9 1476 aa12.26□□□□□ -0.45
Trav1-202ENSMUST00000185651 Ccdc88bQ4QRL3 1481 aa12.25□□□□□ -0.45
Trav1-202ENSMUST00000185651 Grin2bQ01097 1482 aa12.24□□□□□ -0.45
Trav1-202ENSMUST00000185651 Ifnlr1Q8CGK5 535 aa12.22□□□□□ -0.45
Trav1-202ENSMUST00000185651 Soga1E1U8D0 1418 aa12.21□□□□□ -0.45
Trav1-202ENSMUST00000185651 CadpsQ80TJ1 1355 aa12.21□□□□□ -0.45
Trav1-202ENSMUST00000185651 AdgbG3UZ78 1657 aa12.21□□□□□ -0.45
Trav1-202ENSMUST00000185651 Cyb5rlB1AS42 316 aa12.18□□□□□ -0.46
Trav1-202ENSMUST00000185651 Cypt1Q8CH20 168 aa12.18□□□□□ -0.46
Trav1-202ENSMUST00000185651 Arhgef11Q68FM7 1552 aa12.17□□□□□ -0.46
Trav1-202ENSMUST00000185651 EprsQ8CGC7 1512 aaKnown RBP12.16□□□□□ -0.46
Trav1-202ENSMUST00000185651 AI481877A2ALV5 1481 aa12.16□□□□□ -0.46
Trav1-202ENSMUST00000185651 Dnmt1P13864 1620 aaKnown RBP12.16□□□□□ -0.46
Trav1-202ENSMUST00000185651 Neo1P97798 1493 aa12.15□□□□□ -0.46
Trav1-202ENSMUST00000185651 Cngb1E1AZ71 1325 aa12.15□□□□□ -0.46
Trav1-202ENSMUST00000185651 Ttc37F8VPK0 1563 aa12.15□□□□□ -0.46
Trav1-202ENSMUST00000185651 BC005561E9Q5E2 1589 aa12.14□□□□□ -0.47
Trav1-202ENSMUST00000185651 Mapkbp1Q6NS57 1503 aa12.14□□□□□ -0.47
Trav1-202ENSMUST00000185651 Efcab5A0JP43 1406 aa12.13□□□□□ -0.47
Trav1-202ENSMUST00000185651 MlecQ6ZQI3 291 aaKnown RBP12.13□□□□□ -0.47
Trav1-202ENSMUST00000185651 Dnajc5gQ8C632 165 aa12.12□□□□□ -0.47
Trav1-202ENSMUST00000185651 Pla2r1Q62028 1487 aa12.12□□□□□ -0.47
Trav1-202ENSMUST00000185651 Clasp1Q80TV8 1535 aaKnown RBP12.11□□□□□ -0.47
Trav1-202ENSMUST00000185651 Gm14025A2AP89 1413 aa12.1□□□□□ -0.47
Trav1-202ENSMUST00000185651 Hecw2Q6I6G8 1578 aa12.09□□□□□ -0.47
Trav1-202ENSMUST00000185651 Ercc6l2Q9JIM3 1537 aa12.09□□□□□ -0.47
Trav1-202ENSMUST00000185651 Depdc5P61460 1591 aa12.09□□□□□ -0.47
Trav1-202ENSMUST00000185651 Fmn1Q05860 1466 aa12.08□□□□□ -0.47
Trav1-202ENSMUST00000185651 Brwd3A2AHJ4 1799 aa12.08□□□□□ -0.48
Trav1-202ENSMUST00000185651 Arhgap27A2AB59 869 aa12.08□□□□□ -0.48
Trav1-202ENSMUST00000185651 Abca16E9PWJ7 1678 aa12.06□□□□□ -0.48
Trav1-202ENSMUST00000185651 Abcc2Q8VI47 1543 aa12.06□□□□□ -0.48
Trav1-202ENSMUST00000185651 Fndc1E9Q043 1732 aa12.06□□□□□ -0.48
Trav1-202ENSMUST00000185651 Fbxo41Q6NS60 873 aa12.06□□□□□ -0.48
Trav1-202ENSMUST00000185651 Gpatch8A2A6A1 1505 aa12.06□□□□□ -0.48
Trav1-202ENSMUST00000185651 Map3k4O08648 1597 aa12.05□□□□□ -0.48
Trav1-202ENSMUST00000185651 Arid3cA6PWV5 409 aa12.04□□□□□ -0.48
Trav1-202ENSMUST00000185651 Arhgef12Q8R4H2 1543 aaKnown RBP12.04□□□□□ -0.48
Trav1-202ENSMUST00000185651 WizO88286 1684 aaKnown RBP12.01□□□□□ -0.49
Trav1-202ENSMUST00000185651 PxdnQ3UQ28 1475 aa12.01□□□□□ -0.49
Trav1-202ENSMUST00000185651 SynmQ70IV5 1561 aa12□□□□□ -0.49
Trav1-202ENSMUST00000185651 TchhA0A0B4J1F9 1599 aa11.98□□□□□ -0.49
Trav1-202ENSMUST00000185651 Eif4g1Q6NZJ6 1600 aaKnown RBP11.97□□□□□ -0.49
Trav1-202ENSMUST00000185651 Zfyve16Q80U44 1528 aa11.97□□□□□ -0.49
Trav1-202ENSMUST00000185651 Fkbp15Q6P9Q6 1216 aaKnown RBP11.97□□□□□ -0.49
Trav1-202ENSMUST00000185651 Kdm6bQ5NCY0 1641 aa11.94□□□□□ -0.5
Trav1-202ENSMUST00000185651 Slx4Q6P1D7 1565 aa11.93□□□□□ -0.5
Trav1-202ENSMUST00000185651 Znf608Q56A10 1511 aa11.93□□□□□ -0.5
Trav1-202ENSMUST00000185651 Lrrc9Q8CDN9 1456 aa11.93□□□□□ -0.5
Trav1-202ENSMUST00000185651 Adamts12Q811B3 1600 aa11.9□□□□□ -0.5
Trav1-202ENSMUST00000185651 NrkQ9R0G8 1455 aa11.89□□□□□ -0.51
Trav1-202ENSMUST00000185651 Jph4Q80WT0 628 aa11.89□□□□□ -0.51
Trav1-202ENSMUST00000185651 Zeb1Q64318 1117 aa11.88□□□□□ -0.51
Trav1-202ENSMUST00000185651 Rnf17Q99MV7 1640 aa11.86□□□□□ -0.51
Trav1-202ENSMUST00000185651 Shroom4Q1W617 1475 aa11.85□□□□□ -0.51
Trav1-202ENSMUST00000185651 Ecm2Q5FW85 670 aa11.82□□□□□ -0.52
Trav1-202ENSMUST00000185651 Wdr7Q920I9 1489 aa11.82□□□□□ -0.52
Trav1-202ENSMUST00000185651 Igf1rQ60751 1373 aa11.81□□□□□ -0.52
Trav1-202ENSMUST00000185651 Rpap1Q80TE0 1409 aa11.81□□□□□ -0.52
Trav1-202ENSMUST00000185651 AglF8VPN4 1532 aa11.79□□□□□ -0.52
Trav1-202ENSMUST00000185651 Abca5Q8K448 1642 aa11.78□□□□□ -0.52
Trav1-202ENSMUST00000185651 Naip2Q9QUK4 1447 aa11.78□□□□□ -0.52
Trav1-202ENSMUST00000185651 Kdm5bQ80Y84 1544 aa11.77□□□□□ -0.52
Trav1-202ENSMUST00000185651 Cul7Q8VE73 1689 aa11.77□□□□□ -0.53
Trav1-202ENSMUST00000185651 PtprmP28828 1452 aa11.76□□□□□ -0.53
Trav1-202ENSMUST00000185651 Rrbp1Q99PL5 1605 aaKnown RBP11.75□□□□□ -0.53
Trav1-202ENSMUST00000185651 Qser1A2BIE1 1698 aa11.72□□□□□ -0.53
Trav1-202ENSMUST00000185651 Gm7298A0A0N4SVU1 1476 aa11.72□□□□□ -0.53
Trav1-202ENSMUST00000185651 NhsB1AV60 1647 aa11.71□□□□□ -0.53
Trav1-202ENSMUST00000185651 WrnO09053 1401 aa11.7□□□□□ -0.54
Trav1-202ENSMUST00000185651 GapdhsQ64467 440 aa11.7□□□□□ -0.54
Trav1-202ENSMUST00000185651 Atp10dQ8K2X1 1416 aa11.69□□□□□ -0.54
Trav1-202ENSMUST00000185651 MyclP10166 368 aa11.69□□□□□ -0.54
Trav1-202ENSMUST00000185651 Kif14L0N7N1 1674 aaKnown RBP11.67□□□□□ -0.54
Trav1-202ENSMUST00000185651 Neurl4Q5NCX5 1563 aa11.67□□□□□ -0.54
Trav1-202ENSMUST00000185651 Mroh2bQ7M6Y6 1581 aa11.67□□□□□ -0.54
Trav1-202ENSMUST00000185651 A2mQ6GQT1 1474 aa11.66□□□□□ -0.54
Trav1-202ENSMUST00000185651 SphkapQ6NSW3 1687 aa11.63□□□□□ -0.55
Trav1-202ENSMUST00000185651 Adamtsl3G3UXC7 1706 aa11.63□□□□□ -0.55
Trav1-202ENSMUST00000185651 Ahdc1Q6PAL7 1594 aaKnown RBP11.62□□□□□ -0.55
Trav1-202ENSMUST00000185651 Camsap2Q8C1B1 1461 aa11.61□□□□□ -0.55
Trav1-202ENSMUST00000185651 Arhgap31A6X8Z5 1425 aa11.6□□□□□ -0.55
Trav1-202ENSMUST00000185651 Scn4aQ9ER60 1841 aa11.59□□□□□ -0.55
Trav1-202ENSMUST00000185651 Abca8bQ8K440 1620 aa11.59□□□□□ -0.55
Trav1-202ENSMUST00000185651 Gcc2Q8CHG3 1679 aa11.59□□□□□ -0.55
Trav1-202ENSMUST00000185651 Ccdc141E9Q8Q6 1531 aa11.58□□□□□ -0.56
Trav1-202ENSMUST00000185651 Carmil1Q6EDY6 1374 aa11.57□□□□□ -0.56
Trav1-202ENSMUST00000185651 Supt6hQ62383 1726 aaKnown RBP11.57□□□□□ -0.56
Trav1-202ENSMUST00000185651 Cul9Q80TT8 1865 aa11.57□□□□□ -0.56
Trav1-202ENSMUST00000185651 Npm2Q80W85 207 aa11.56□□□□□ -0.56
Trav1-202ENSMUST00000185651 Mroh2aD3Z750 1679 aa11.55□□□□□ -0.56
Trav1-202ENSMUST00000185651 Safb2Q80YR5 991 aaKnown RBP11.55□□□□□ -0.56
Trav1-202ENSMUST00000185651 Map3k1P53349 1493 aa11.55□□□□□ -0.56
Trav1-202ENSMUST00000185651 Synj2Q9D2G5 1434 aa11.54□□□□□ -0.56
Trav1-202ENSMUST00000185651 Chic1Q8CBW7 227 aa11.54□□□□□ -0.56
Trav1-202ENSMUST00000185651 Polr1aO35134 1717 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms