RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Duox2A2AQ99 1517 aa16.47■□□□□ 0.23
Lig1-211ENSMUST00000177588 Map3k1P53349 1493 aa16.46■□□□□ 0.23
Lig1-211ENSMUST00000177588 Efcab5A0JP43 1406 aa16.46■□□□□ 0.23
Lig1-211ENSMUST00000177588 CenpbP27790 599 aa16.46■□□□□ 0.22
Lig1-211ENSMUST00000177588 Erich3F6QRE9 1637 aa16.42■□□□□ 0.22
Lig1-211ENSMUST00000177588 Myt1Q8CFC2 1127 aa16.42■□□□□ 0.22
Lig1-211ENSMUST00000177588 Kdm5bQ80Y84 1544 aa16.4■□□□□ 0.22
Lig1-211ENSMUST00000177588 Mroh2bQ7M6Y6 1581 aa16.39■□□□□ 0.21
Lig1-211ENSMUST00000177588 Kif21aQ9QXL2 1672 aa16.39■□□□□ 0.21
Lig1-211ENSMUST00000177588 Arap1Q4LDD4 1452 aa16.37■□□□□ 0.21
Lig1-211ENSMUST00000177588 Ap3b1Q9Z1T1 1105 aa16.35■□□□□ 0.21
Lig1-211ENSMUST00000177588 AqrQ8CFQ3 1481 aaKnown RBP16.34■□□□□ 0.21
Lig1-211ENSMUST00000177588 Gm38655A0A286YDK6 273 aa16.34■□□□□ 0.21
Lig1-211ENSMUST00000177588 Eea1Q8BL66 1411 aa16.33■□□□□ 0.21
Lig1-211ENSMUST00000177588 Crocc2F6XLV1 1638 aa16.33■□□□□ 0.21
Lig1-211ENSMUST00000177588 Arhgef5E9Q7D5 1581 aa16.32■□□□□ 0.2
Lig1-211ENSMUST00000177588 Setd5Q5XJV7 1441 aa16.31■□□□□ 0.2
Lig1-211ENSMUST00000177588 Samd9lQ69Z37 1561 aa16.31■□□□□ 0.2
Lig1-211ENSMUST00000177588 Rad54l2Q99NG0 1466 aa16.3■□□□□ 0.2
Lig1-211ENSMUST00000177588 Plb1Q3TTY0 1478 aa16.28■□□□□ 0.2
Lig1-211ENSMUST00000177588 Carmil1Q6EDY6 1374 aa16.27■□□□□ 0.19
Lig1-211ENSMUST00000177588 TchhA0A0B4J1F9 1599 aa16.27■□□□□ 0.19
Lig1-211ENSMUST00000177588 Eid3Q3V124 375 aa16.26■□□□□ 0.19
Lig1-211ENSMUST00000177588 SynmQ70IV5 1561 aa16.24■□□□□ 0.19
Lig1-211ENSMUST00000177588 Urb2E9Q7L1 1524 aaKnown RBP16.22■□□□□ 0.19
Lig1-211ENSMUST00000177588 Peg3Q3URU2 1571 aa16.21■□□□□ 0.19
Lig1-211ENSMUST00000177588 Tiam1Q60610 1591 aa16.21■□□□□ 0.19
Lig1-211ENSMUST00000177588 Hnrnpul2Q00PI9 745 aaKnown RBP16.21■□□□□ 0.19
Lig1-211ENSMUST00000177588 Tnnt3Q9QZ47 272 aa16.21■□□□□ 0.19
Lig1-211ENSMUST00000177588 Lmo7E9PYF4 1699 aaKnown RBP16.21■□□□□ 0.19
Lig1-211ENSMUST00000177588 Ankrd26Q811D2 1581 aa16.17■□□□□ 0.18
Lig1-211ENSMUST00000177588 Gpatch8A2A6A1 1505 aa16.17■□□□□ 0.18
Lig1-211ENSMUST00000177588 Cux1P53564 1515 aa16.15■□□□□ 0.18
Lig1-211ENSMUST00000177588 Disp1Q3TDN0 1521 aa16.14■□□□□ 0.17
Lig1-211ENSMUST00000177588 Naip1Q9QWK5 1403 aa16.12■□□□□ 0.17
Lig1-211ENSMUST00000177588 SafbD3YXK2 937 aaKnown RBP16.12■□□□□ 0.17
Lig1-211ENSMUST00000177588 Rpap1Q80TE0 1409 aa16.11■□□□□ 0.17
Lig1-211ENSMUST00000177588 Grin2aP35436 1464 aa16.11■□□□□ 0.17
Lig1-211ENSMUST00000177588 Pla2r1Q62028 1487 aa16.11■□□□□ 0.17
Lig1-211ENSMUST00000177588 Magi3Q9EQJ9 1476 aa16.11■□□□□ 0.17
Lig1-211ENSMUST00000177588 Lrriq1Q0P5X1 1673 aa16.11■□□□□ 0.17
Lig1-211ENSMUST00000177588 Ift140E9PY46 1464 aa16.1■□□□□ 0.17
Lig1-211ENSMUST00000177588 Fyco1Q8VDC1 1437 aa16.09■□□□□ 0.17
Lig1-211ENSMUST00000177588 EprsQ8CGC7 1512 aaKnown RBP16.08■□□□□ 0.17
Lig1-211ENSMUST00000177588 Lmod2Q3UHZ5 550 aa16.08■□□□□ 0.16
Lig1-211ENSMUST00000177588 BlmO88700 1416 aa16.07■□□□□ 0.16
Lig1-211ENSMUST00000177588 Polr1aO35134 1717 aaKnown RBP16.07■□□□□ 0.16
Lig1-211ENSMUST00000177588 Fam71e1A1L3C1 212 aa16.06■□□□□ 0.16
Lig1-211ENSMUST00000177588 Aebp1Q640N1 1128 aa16.06■□□□□ 0.16
Lig1-211ENSMUST00000177588 Slx4Q6P1D7 1565 aa16.05■□□□□ 0.16
Lig1-211ENSMUST00000177588 Pcf11G3X9Z4 1553 aa16.05■□□□□ 0.16
Lig1-211ENSMUST00000177588 Znf710Q3U288 666 aa16.04■□□□□ 0.16
Lig1-211ENSMUST00000177588 UacaQ8CGB3 1411 aa16.03■□□□□ 0.16
Lig1-211ENSMUST00000177588 Mapk8ip2Q9ERE9 830 aa16.03■□□□□ 0.16
Lig1-211ENSMUST00000177588 CadpsQ80TJ1 1355 aa16.02■□□□□ 0.15
Lig1-211ENSMUST00000177588 CntlnA2AM05 1397 aa16.01■□□□□ 0.15
Lig1-211ENSMUST00000177588 Nup160Q9Z0W3 1402 aaKnown RBP16■□□□□ 0.15
Lig1-211ENSMUST00000177588 NclP09405 707 aaKnown RBP15.99■□□□□ 0.15
Lig1-211ENSMUST00000177588 Gm7298A0A0N4SVU1 1476 aa15.99■□□□□ 0.15
Lig1-211ENSMUST00000177588 Stra8P70278 393 aa15.98■□□□□ 0.15
Lig1-211ENSMUST00000177588 Setd1bQ8CFT2 1985 aa15.97■□□□□ 0.15
Lig1-211ENSMUST00000177588 Fam50aQ9WV03 339 aaKnown RBP15.97■□□□□ 0.15
Lig1-211ENSMUST00000177588 Arhgap27A2AB59 869 aa15.96■□□□□ 0.15
Lig1-211ENSMUST00000177588 WizO88286 1684 aaKnown RBP15.96■□□□□ 0.15
Lig1-211ENSMUST00000177588 Ankrd36D3Z4K0 1415 aa15.96■□□□□ 0.15
Lig1-211ENSMUST00000177588 3425401B19RikD3Z1D3 1412 aa15.96■□□□□ 0.14
Lig1-211ENSMUST00000177588 Cc2d2bA0A286YDU8 1405 aa15.95■□□□□ 0.14
Lig1-211ENSMUST00000177588 Fhad1A6PWD2 1420 aa15.94■□□□□ 0.14
Lig1-211ENSMUST00000177588 Gm13697A2AK42 830 aa15.93■□□□□ 0.14
Lig1-211ENSMUST00000177588 PxdnQ3UQ28 1475 aa15.93■□□□□ 0.14
Lig1-211ENSMUST00000177588 Pbrm1Q8BSQ9 1634 aaKnown RBP15.93■□□□□ 0.14
Lig1-211ENSMUST00000177588 Adamts12Q811B3 1600 aa15.91■□□□□ 0.14
Lig1-211ENSMUST00000177588 Ccer2J3QPU5 274 aa15.9■□□□□ 0.14
Lig1-211ENSMUST00000177588 Hspa5P20029 655 aaKnown RBP15.9■□□□□ 0.14
Lig1-211ENSMUST00000177588 Mia2Q91ZV0 1396 aa15.89■□□□□ 0.13
Lig1-211ENSMUST00000177588 Kif27Q7M6Z4 1394 aa15.89■□□□□ 0.13
Lig1-211ENSMUST00000177588 Soga1E1U8D0 1418 aa15.88■□□□□ 0.13
Lig1-211ENSMUST00000177588 Abca5Q8K448 1642 aa15.88■□□□□ 0.13
Lig1-211ENSMUST00000177588 Anp32aO35381 247 aa15.88■□□□□ 0.13
Lig1-211ENSMUST00000177588 Vps8Q0P5W1 1427 aa15.88■□□□□ 0.13
Lig1-211ENSMUST00000177588 WrnO09053 1401 aa15.87■□□□□ 0.13
Lig1-211ENSMUST00000177588 Camsap2Q8C1B1 1461 aa15.86■□□□□ 0.13
Lig1-211ENSMUST00000177588 Fhod3Q76LL6 1578 aa15.85■□□□□ 0.13
Lig1-211ENSMUST00000177588 Abca16E9PWJ7 1678 aa15.85■□□□□ 0.13
Lig1-211ENSMUST00000177588 Rusc2Q80U22 1514 aa15.84■□□□□ 0.13
Lig1-211ENSMUST00000177588 Gm1043A0A140LJC2 1431 aa15.83■□□□□ 0.13
Lig1-211ENSMUST00000177588 Eif4g3Q80XI3 1579 aaKnown RBP15.83■□□□□ 0.12
Lig1-211ENSMUST00000177588 Naip2Q9QUK4 1447 aa15.82■□□□□ 0.12
Lig1-211ENSMUST00000177588 Gcc2Q8CHG3 1679 aa15.81■□□□□ 0.12
Lig1-211ENSMUST00000177588 Cul7Q8VE73 1689 aa15.8■□□□□ 0.12
Lig1-211ENSMUST00000177588 Ncoa2Q61026 1462 aa15.79■□□□□ 0.12
Lig1-211ENSMUST00000177588 Calr4Q3TQS0 420 aa15.79■□□□□ 0.12
Lig1-211ENSMUST00000177588 Smg6P61406 1418 aaKnown RBP15.79■□□□□ 0.12
Lig1-211ENSMUST00000177588 Abcc2Q8VI47 1543 aa15.78■□□□□ 0.12
Lig1-211ENSMUST00000177588 Naip5Q9R016 1403 aa15.77■□□□□ 0.11
Lig1-211ENSMUST00000177588 Lmtk2Q3TYD6 1471 aa15.76■□□□□ 0.11
Lig1-211ENSMUST00000177588 Shroom2A2ALU4 1481 aa15.76■□□□□ 0.11
Lig1-211ENSMUST00000177588 AknaQ80VW7 1404 aa15.74■□□□□ 0.11
Lig1-211ENSMUST00000177588 Nolc1E9Q5C9 702 aaKnown RBP15.74■□□□□ 0.11
Lig1-211ENSMUST00000177588 Ccnb3Q810T2 1396 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms