RNA–Protein interactions for RNA: ENSMUST00000176745.7

Cux1-211, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-211ENSMUST00000176745 TonslQ6NZL6 1363 aa14.54□□□□□ -0.08
Cux1-211ENSMUST00000176745 Rapgef2Q8CHG7 1496 aa14.52□□□□□ -0.08
Cux1-211ENSMUST00000176745 Kif21aQ9QXL2 1672 aa14.52□□□□□ -0.09
Cux1-211ENSMUST00000176745 LrpprcQ6PB66 1392 aaKnown RBP14.49□□□□□ -0.09
Cux1-211ENSMUST00000176745 Shroom4Q1W617 1475 aa14.48□□□□□ -0.09
Cux1-211ENSMUST00000176745 PogzQ8BZH4 1409 aaKnown RBP14.48□□□□□ -0.09
Cux1-211ENSMUST00000176745 Eif4g1Q6NZJ6 1600 aaKnown RBP14.48□□□□□ -0.09
Cux1-211ENSMUST00000176745 Npm1Q61937 292 aaKnown RBP14.47□□□□□ -0.09
Cux1-211ENSMUST00000176745 Tnnt3Q9QZ47 272 aa14.45□□□□□ -0.1
Cux1-211ENSMUST00000176745 Efcab5A0JP43 1406 aa14.44□□□□□ -0.1
Cux1-211ENSMUST00000176745 Crocc2F6XLV1 1638 aa14.42□□□□□ -0.1
Cux1-211ENSMUST00000176745 Gtf3c3Q3TMP1 882 aa14.41□□□□□ -0.1
Cux1-211ENSMUST00000176745 Dhx29Q6PGC1 1365 aaKnown RBP14.4□□□□□ -0.1
Cux1-211ENSMUST00000176745 Duox2A2AQ99 1517 aa14.4□□□□□ -0.1
Cux1-211ENSMUST00000176745 Anp32aO35381 247 aa14.4□□□□□ -0.1
Cux1-211ENSMUST00000176745 Plcd4Q8K3R3 807 aa14.39□□□□□ -0.11
Cux1-211ENSMUST00000176745 PtprkP35822 1457 aa14.39□□□□□ -0.11
Cux1-211ENSMUST00000176745 Pelp1Q9DBD5 1123 aaKnown RBP14.38□□□□□ -0.11
Cux1-211ENSMUST00000176745 Map3k1P53349 1493 aa14.37□□□□□ -0.11
Cux1-211ENSMUST00000176745 Ap3b1Q9Z1T1 1105 aa14.36□□□□□ -0.11
Cux1-211ENSMUST00000176745 Cep162Q6ZQ06 1403 aa14.36□□□□□ -0.11
Cux1-211ENSMUST00000176745 Lrriq1Q0P5X1 1673 aa14.35□□□□□ -0.11
Cux1-211ENSMUST00000176745 Gpatch8A2A6A1 1505 aa14.34□□□□□ -0.11
Cux1-211ENSMUST00000176745 Il27Q8K3I6 234 aa14.34□□□□□ -0.11
Cux1-211ENSMUST00000176745 Samd9lQ69Z37 1561 aa14.32□□□□□ -0.12
Cux1-211ENSMUST00000176745 Ttbk1Q6PCN3 1308 aa14.31□□□□□ -0.12
Cux1-211ENSMUST00000176745 Mroh2bQ7M6Y6 1581 aa14.31□□□□□ -0.12
Cux1-211ENSMUST00000176745 Plppr3Q7TPB0 716 aa14.31□□□□□ -0.12
Cux1-211ENSMUST00000176745 Arhgap35Q91YM2 1499 aa14.31□□□□□ -0.12
Cux1-211ENSMUST00000176745 AqrQ8CFQ3 1481 aaKnown RBP14.3□□□□□ -0.12
Cux1-211ENSMUST00000176745 CatipB9EKE5 520 aa14.3□□□□□ -0.12
Cux1-211ENSMUST00000176745 Pbrm1Q8BSQ9 1634 aaKnown RBP14.3□□□□□ -0.12
Cux1-211ENSMUST00000176745 Urb2E9Q7L1 1524 aaKnown RBP14.29□□□□□ -0.12
Cux1-211ENSMUST00000176745 SynmQ70IV5 1561 aa14.27□□□□□ -0.13
Cux1-211ENSMUST00000176745 Plb1Q3TTY0 1478 aa14.26□□□□□ -0.13
Cux1-211ENSMUST00000176745 Upf2A2AT37 1269 aaKnown RBP14.25□□□□□ -0.13
Cux1-211ENSMUST00000176745 Ift140E9PY46 1464 aa14.25□□□□□ -0.13
Cux1-211ENSMUST00000176745 Irx3P81067 507 aa14.21□□□□□ -0.13
Cux1-211ENSMUST00000176745 Znf710Q3U288 666 aa14.21□□□□□ -0.14
Cux1-211ENSMUST00000176745 Eif4g3Q80XI3 1579 aaKnown RBP14.2□□□□□ -0.14
Cux1-211ENSMUST00000176745 Myt1lP97500 1187 aa14.19□□□□□ -0.14
Cux1-211ENSMUST00000176745 Npm2Q80W85 207 aa14.19□□□□□ -0.14
Cux1-211ENSMUST00000176745 Disp1Q3TDN0 1521 aa14.19□□□□□ -0.14
Cux1-211ENSMUST00000176745 Setd1bQ8CFT2 1985 aa14.18□□□□□ -0.14
Cux1-211ENSMUST00000176745 Ncapd3Q6ZQK0 1506 aa14.18□□□□□ -0.14
Cux1-211ENSMUST00000176745 Nolc1E9Q5C9 702 aaKnown RBP14.18□□□□□ -0.14
Cux1-211ENSMUST00000176745 Magi3Q9EQJ9 1476 aa14.17□□□□□ -0.14
Cux1-211ENSMUST00000176745 Gtf3c5Q8R2T8 520 aa14.17□□□□□ -0.14
Cux1-211ENSMUST00000176745 Plekhg3Q4VAC9 1341 aa14.16□□□□□ -0.14
Cux1-211ENSMUST00000176745 Carmil1Q6EDY6 1374 aa14.16□□□□□ -0.14
Cux1-211ENSMUST00000176745 Nup160Q9Z0W3 1402 aaKnown RBP14.16□□□□□ -0.14
Cux1-211ENSMUST00000176745 Ipo4Q8VI75 1082 aa14.15□□□□□ -0.14
Cux1-211ENSMUST00000176745 Polr1aO35134 1717 aaKnown RBP14.14□□□□□ -0.15
Cux1-211ENSMUST00000176745 Eid3Q3V124 375 aa14.14□□□□□ -0.15
Cux1-211ENSMUST00000176745 Ccdc9Q8VC31 543 aaKnown RBP14.14□□□□□ -0.15
Cux1-211ENSMUST00000176745 Pla2r1Q62028 1487 aa14.13□□□□□ -0.15
Cux1-211ENSMUST00000176745 Grin2aP35436 1464 aa14.13□□□□□ -0.15
Cux1-211ENSMUST00000176745 Clip1Q922J3 1391 aa14.13□□□□□ -0.15
Cux1-211ENSMUST00000176745 Erich3F6QRE9 1637 aa14.12□□□□□ -0.15
Cux1-211ENSMUST00000176745 Rad54l2Q99NG0 1466 aa14.11□□□□□ -0.15
Cux1-211ENSMUST00000176745 Rusc2Q80U22 1514 aa14.1□□□□□ -0.15
Cux1-211ENSMUST00000176745 Zfp777B9EKF4 885 aa14.1□□□□□ -0.15
Cux1-211ENSMUST00000176745 Stra8P70278 393 aa14.09□□□□□ -0.15
Cux1-211ENSMUST00000176745 Calr4Q3TQS0 420 aa14.09□□□□□ -0.15
Cux1-211ENSMUST00000176745 Supt16hQ920B9 1047 aa14.09□□□□□ -0.15
Cux1-211ENSMUST00000176745 Cc2d2bA0A286YDU8 1405 aa14.09□□□□□ -0.15
Cux1-211ENSMUST00000176745 Rpap1Q80TE0 1409 aa14.09□□□□□ -0.15
Cux1-211ENSMUST00000176745 BccipQ9CWI3 316 aa14.08□□□□□ -0.16
Cux1-211ENSMUST00000176745 EprsQ8CGC7 1512 aaKnown RBP14.08□□□□□ -0.16
Cux1-211ENSMUST00000176745 Adamts12Q811B3 1600 aa14.07□□□□□ -0.16
Cux1-211ENSMUST00000176745 Ankrd26Q811D2 1581 aa14.06□□□□□ -0.16
Cux1-211ENSMUST00000176745 Ccdc27Q3V036 639 aa14.06□□□□□ -0.16
Cux1-211ENSMUST00000176745 Eea1Q8BL66 1411 aa14.02□□□□□ -0.17
Cux1-211ENSMUST00000176745 Cux1P53564 1515 aa14.01□□□□□ -0.17
Cux1-211ENSMUST00000176745 Lmo7E9PYF4 1699 aaKnown RBP14.01□□□□□ -0.17
Cux1-211ENSMUST00000176745 Abca5Q8K448 1642 aa14.01□□□□□ -0.17
Cux1-211ENSMUST00000176745 Fyco1Q8VDC1 1437 aa14.01□□□□□ -0.17
Cux1-211ENSMUST00000176745 Kdm5bQ80Y84 1544 aa14□□□□□ -0.17
Cux1-211ENSMUST00000176745 TchhA0A0B4J1F9 1599 aa13.99□□□□□ -0.17
Cux1-211ENSMUST00000176745 Abca16E9PWJ7 1678 aa13.99□□□□□ -0.17
Cux1-211ENSMUST00000176745 WizO88286 1684 aaKnown RBP13.97□□□□□ -0.17
Cux1-211ENSMUST00000176745 Arhgef5E9Q7D5 1581 aa13.96□□□□□ -0.18
Cux1-211ENSMUST00000176745 Arap1Q4LDD4 1452 aa13.95□□□□□ -0.18
Cux1-211ENSMUST00000176745 Kcnn1Q9EQR3 537 aa13.95□□□□□ -0.18
Cux1-211ENSMUST00000176745 AampJ3QN89 436 aa13.94□□□□□ -0.18
Cux1-211ENSMUST00000176745 CadpsQ80TJ1 1355 aa13.94□□□□□ -0.18
Cux1-211ENSMUST00000176745 Soga1E1U8D0 1418 aa13.94□□□□□ -0.18
Cux1-211ENSMUST00000176745 Setd5Q5XJV7 1441 aa13.93□□□□□ -0.18
Cux1-211ENSMUST00000176745 Peg3Q3URU2 1571 aa13.93□□□□□ -0.18
Cux1-211ENSMUST00000176745 Gm7298A0A0N4SVU1 1476 aa13.92□□□□□ -0.18
Cux1-211ENSMUST00000176745 Pcf11G3X9Z4 1553 aa13.92□□□□□ -0.18
Cux1-211ENSMUST00000176745 Ppp4r2Q0VGB7 417 aa13.92□□□□□ -0.18
Cux1-211ENSMUST00000176745 NclP09405 707 aaKnown RBP13.91□□□□□ -0.18
Cux1-211ENSMUST00000176745 Abcc2Q8VI47 1543 aa13.91□□□□□ -0.18
Cux1-211ENSMUST00000176745 Scaf1Q5U4C3 1256 aaKnown RBP13.91□□□□□ -0.18
Cux1-211ENSMUST00000176745 Hsp90aa1P07901 733 aaKnown RBP13.9□□□□□ -0.18
Cux1-211ENSMUST00000176745 Map3k4O08648 1597 aa13.89□□□□□ -0.19
Cux1-211ENSMUST00000176745 Tiam1Q60610 1591 aa13.89□□□□□ -0.19
Cux1-211ENSMUST00000176745 Wdr43Q6ZQL4 677 aaKnown RBP13.89□□□□□ -0.19
Cux1-211ENSMUST00000176745 PxdnQ3UQ28 1475 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms