RNA–Protein interactions for RNA: ENSMUST00000175898.3

Six3-202, Transcript of Homeobox protein SIX3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Six3, Length 2,419 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six3-202ENSMUST00000175898 Arhgef5E9Q7D5 1581 aa38.57■■■■□ 3.76
Six3-202ENSMUST00000175898 Stra8P70278 393 aa38.53■■■■□ 3.76
Six3-202ENSMUST00000175898 Anp32aO35381 247 aa38.52■■■■□ 3.76
Six3-202ENSMUST00000175898 Baz1bQ9Z277 1479 aa38.5■■■■□ 3.75
Six3-202ENSMUST00000175898 Il27Q8K3I6 234 aa38.5■■■■□ 3.75
Six3-202ENSMUST00000175898 NrkQ9R0G8 1455 aa38.44■■■■□ 3.74
Six3-202ENSMUST00000175898 PtprkP35822 1457 aa38.39■■■■□ 3.74
Six3-202ENSMUST00000175898 Thoc2B1AZI6 1594 aaKnown RBP38.36■■■■□ 3.73
Six3-202ENSMUST00000175898 Camsap1A2AHC3 1581 aa38.32■■■■□ 3.73
Six3-202ENSMUST00000175898 Phldb1Q6PDH0 1371 aaKnown RBP38.32■■■■□ 3.72
Six3-202ENSMUST00000175898 Setd5Q5XJV7 1441 aa38.32■■■■□ 3.72
Six3-202ENSMUST00000175898 Tiam1Q60610 1591 aa38.31■■■■□ 3.72
Six3-202ENSMUST00000175898 UacaQ8CGB3 1411 aa38.24■■■■□ 3.71
Six3-202ENSMUST00000175898 Rtl5Q5DTT4 599 aa38.22■■■■□ 3.71
Six3-202ENSMUST00000175898 Map3k1P53349 1493 aa38.2■■■■□ 3.71
Six3-202ENSMUST00000175898 NclP09405 707 aaKnown RBP38.16■■■■□ 3.7
Six3-202ENSMUST00000175898 Shroom4Q1W617 1475 aa38.14■■■■□ 3.7
Six3-202ENSMUST00000175898 Ubl4bQ9CQ84 188 aa38.14■■■■□ 3.7
Six3-202ENSMUST00000175898 Calr4Q3TQS0 420 aa38.1■■■■□ 3.69
Six3-202ENSMUST00000175898 Naip1Q9QWK5 1403 aa38.1■■■■□ 3.69
Six3-202ENSMUST00000175898 Gm13697A2AK42 830 aa38.08■■■■□ 3.69
Six3-202ENSMUST00000175898 Grin2bQ01097 1482 aa38.07■■■■□ 3.69
Six3-202ENSMUST00000175898 Cux2P70298 1426 aa38.05■■■■□ 3.68
Six3-202ENSMUST00000175898 Nolc1E9Q5C9 702 aaKnown RBP38.04■■■■□ 3.68
Six3-202ENSMUST00000175898 Erich3F6QRE9 1637 aa38.01■■■■□ 3.68
Six3-202ENSMUST00000175898 BlmO88700 1416 aa37.99■■■■□ 3.67
Six3-202ENSMUST00000175898 Ankrd36D3Z4K0 1415 aa37.98■■■■□ 3.67
Six3-202ENSMUST00000175898 AqrQ8CFQ3 1481 aaKnown RBP37.94■■■■□ 3.66
Six3-202ENSMUST00000175898 Fam135aQ6NS59 1506 aa37.93■■■■□ 3.66
Six3-202ENSMUST00000175898 Npm1Q61937 292 aaKnown RBP37.9■■■■□ 3.66
Six3-202ENSMUST00000175898 Ankrd26Q811D2 1581 aa37.86■■■■□ 3.65
Six3-202ENSMUST00000175898 Ccer2J3QPU5 274 aa37.86■■■■□ 3.65
Six3-202ENSMUST00000175898 Pelp1Q9DBD5 1123 aaKnown RBP37.85■■■■□ 3.65
Six3-202ENSMUST00000175898 Camsap2Q8C1B1 1461 aa37.84■■■■□ 3.65
Six3-202ENSMUST00000175898 Slx4Q6P1D7 1565 aa37.84■■■■□ 3.65
Six3-202ENSMUST00000175898 Fam50aQ9WV03 339 aaKnown RBP37.83■■■■□ 3.65
Six3-202ENSMUST00000175898 Fhad1A6PWD2 1420 aa37.82■■■■□ 3.65
Six3-202ENSMUST00000175898 Smg6P61406 1418 aaKnown RBP37.79■■■■□ 3.64
Six3-202ENSMUST00000175898 Supt16hQ920B9 1047 aa37.79■■■■□ 3.64
Six3-202ENSMUST00000175898 Pcf11G3X9Z4 1553 aa37.79■■■■□ 3.64
Six3-202ENSMUST00000175898 Mroh2bQ7M6Y6 1581 aa37.79■■■■□ 3.64
Six3-202ENSMUST00000175898 Hspa5P20029 655 aaKnown RBP37.78■■■■□ 3.64
Six3-202ENSMUST00000175898 Mia2Q91ZV0 1396 aa37.74■■■■□ 3.63
Six3-202ENSMUST00000175898 Washc2Q6PGL7 1334 aa37.74■■■■□ 3.63
Six3-202ENSMUST00000175898 Dhx29Q6PGC1 1365 aaKnown RBP37.74■■■■□ 3.63
Six3-202ENSMUST00000175898 3425401B19RikD3Z1D3 1412 aa37.72■■■■□ 3.63
Six3-202ENSMUST00000175898 LrpprcQ6PB66 1392 aaKnown RBP37.71■■■■□ 3.63
Six3-202ENSMUST00000175898 Ncoa2Q61026 1462 aa37.7■■■■□ 3.63
Six3-202ENSMUST00000175898 Ifnlr1Q8CGK5 535 aa37.68■■■■□ 3.62
Six3-202ENSMUST00000175898 Vps8Q0P5W1 1427 aa37.68■■■■□ 3.62
Six3-202ENSMUST00000175898 Efcab5A0JP43 1406 aa37.64■■■■□ 3.62
Six3-202ENSMUST00000175898 Lmo7E9PYF4 1699 aaKnown RBP37.62■■■■□ 3.61
Six3-202ENSMUST00000175898 CntlnA2AM05 1397 aa37.61■■■■□ 3.61
Six3-202ENSMUST00000175898 PogzQ8BZH4 1409 aaKnown RBP37.61■■■■□ 3.61
Six3-202ENSMUST00000175898 Duox2A2AQ99 1517 aa37.57■■■■□ 3.61
Six3-202ENSMUST00000175898 Crocc2F6XLV1 1638 aa37.54■■■■□ 3.6
Six3-202ENSMUST00000175898 Fyco1Q8VDC1 1437 aa37.54■■■■□ 3.6
Six3-202ENSMUST00000175898 Wdr43Q6ZQL4 677 aaKnown RBP37.53■■■■□ 3.6
Six3-202ENSMUST00000175898 Naip5Q9R016 1403 aa37.49■■■■□ 3.59
Six3-202ENSMUST00000175898 Peg3Q3URU2 1571 aa37.48■■■■□ 3.59
Six3-202ENSMUST00000175898 Ppp4r2Q0VGB7 417 aa37.48■■■■□ 3.59
Six3-202ENSMUST00000175898 Naip2Q9QUK4 1447 aa37.46■■■■□ 3.59
Six3-202ENSMUST00000175898 Sin3aQ60520 1274 aaKnown RBP37.45■■■■□ 3.59
Six3-202ENSMUST00000175898 Lmod2Q3UHZ5 550 aa37.42■■■■□ 3.58
Six3-202ENSMUST00000175898 PrkcshO08795 521 aa37.4■■■■□ 3.58
Six3-202ENSMUST00000175898 Slc24a1Q91WD8 1130 aa37.4■■■■□ 3.58
Six3-202ENSMUST00000175898 Carmil1Q6EDY6 1374 aa37.38■■■■□ 3.57
Six3-202ENSMUST00000175898 Cul7Q8VE73 1689 aa37.34■■■■□ 3.57
Six3-202ENSMUST00000175898 Dnajc5bQ9CQ94 199 aa37.33■■■■□ 3.57
Six3-202ENSMUST00000175898 Cux1P53564 1515 aa37.32■■■■□ 3.56
Six3-202ENSMUST00000175898 Samd9lQ69Z37 1561 aa37.29■■■■□ 3.56
Six3-202ENSMUST00000175898 Pprc1Q6NZN1 1644 aa37.28■■■■□ 3.56
Six3-202ENSMUST00000175898 Gm7298A0A0N4SVU1 1476 aa37.25■■■■□ 3.55
Six3-202ENSMUST00000175898 SynmQ70IV5 1561 aa37.22■■■■□ 3.55
Six3-202ENSMUST00000175898 Mrc2Q64449 1479 aa37.19■■■■□ 3.54
Six3-202ENSMUST00000175898 Eif5bQ05D44 1216 aaKnown RBP37.19■■■■□ 3.54
Six3-202ENSMUST00000175898 Liat1Q810M6 228 aa37.19■■■■□ 3.54
Six3-202ENSMUST00000175898 Urb2E9Q7L1 1524 aaKnown RBP37.19■■■■□ 3.54
Six3-202ENSMUST00000175898 Dennd4bQ3U1Y4 1499 aa37.19■■■■□ 3.54
Six3-202ENSMUST00000175898 Fhod3Q76LL6 1578 aa37.19■■■■□ 3.54
Six3-202ENSMUST00000175898 Rad54l2Q99NG0 1466 aa37.18■■■■□ 3.54
Six3-202ENSMUST00000175898 Gm1043A0A140LJC2 1431 aa37.17■■■■□ 3.54
Six3-202ENSMUST00000175898 A2mQ6GQT1 1474 aa37.15■■■■□ 3.54
Six3-202ENSMUST00000175898 Kif21aQ9QXL2 1672 aa37.14■■■■□ 3.54
Six3-202ENSMUST00000175898 Pak3Q61036 559 aa37.14■■■■□ 3.54
Six3-202ENSMUST00000175898 Mrs2Q5NCE8 434 aa37.12■■■■□ 3.53
Six3-202ENSMUST00000175898 Slc4a2P13808 1237 aaKnown RBP37.09■■■■□ 3.53
Six3-202ENSMUST00000175898 Gm13695A2AK44 830 aa37.07■■■■□ 3.53
Six3-202ENSMUST00000175898 Ncoa1P70365 1447 aa37.07■■■■□ 3.52
Six3-202ENSMUST00000175898 Egfem1Q8C088 590 aa37.03■■■■□ 3.52
Six3-202ENSMUST00000175898 Aebp1Q640N1 1128 aa37■■■■□ 3.51
Six3-202ENSMUST00000175898 Ube2uB1AUC4 352 aa36.97■■■■□ 3.51
Six3-202ENSMUST00000175898 Ccdc27Q3V036 639 aa36.97■■■■□ 3.51
Six3-202ENSMUST00000175898 NrdcQ8BHG1 1161 aa36.94■■■■□ 3.5
Six3-202ENSMUST00000175898 Setbp1Q9Z180 1582 aa36.92■■■■□ 3.5
Six3-202ENSMUST00000175898 Polr1aO35134 1717 aaKnown RBP36.91■■■■□ 3.5
Six3-202ENSMUST00000175898 P3h3Q8CG70 732 aa36.91■■■■□ 3.5
Six3-202ENSMUST00000175898 Wwc2Q6NXJ0 1187 aa36.89■■■■□ 3.5
Six3-202ENSMUST00000175898 Upf2A2AT37 1269 aaKnown RBP36.89■■■■□ 3.5
Six3-202ENSMUST00000175898 Exoc6Q8R313 802 aa36.88■■■■□ 3.49
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms