RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Grin2bQ01097 1482 aa16.36■□□□□ 0.21
Ccdc28a-205ENSMUST00000174592 Soga1E1U8D0 1418 aa16.36■□□□□ 0.21
Ccdc28a-205ENSMUST00000174592 Cngb1E1AZ71 1325 aa16.35■□□□□ 0.21
Ccdc28a-205ENSMUST00000174592 Efcab5A0JP43 1406 aa16.35■□□□□ 0.21
Ccdc28a-205ENSMUST00000174592 Top2aQ01320 1528 aaKnown RBP16.33■□□□□ 0.2
Ccdc28a-205ENSMUST00000174592 Magi3Q9EQJ9 1476 aa16.3■□□□□ 0.2
Ccdc28a-205ENSMUST00000174592 Ifnlr1Q8CGK5 535 aa16.29■□□□□ 0.2
Ccdc28a-205ENSMUST00000174592 Ccdc88bQ4QRL3 1481 aa16.28■□□□□ 0.2
Ccdc28a-205ENSMUST00000174592 Chd1P40201 1711 aa16.28■□□□□ 0.2
Ccdc28a-205ENSMUST00000174592 Cyb5rlB1AS42 316 aa16.26■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 Plppr3Q7TPB0 716 aa16.26■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 Ak9G3UYQ4 1894 aa16.25■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 AI481877A2ALV5 1481 aa16.24■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 Fmn1Q05860 1466 aa16.23■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 EprsQ8CGC7 1512 aaKnown RBP16.22■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 Gm14025A2AP89 1413 aa16.21■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 Arhgap27A2AB59 869 aa16.21■□□□□ 0.19
Ccdc28a-205ENSMUST00000174592 Alpk3Q924C5 1678 aa16.2■□□□□ 0.18
Ccdc28a-205ENSMUST00000174592 Arhgef11Q68FM7 1552 aa16.19■□□□□ 0.18
Ccdc28a-205ENSMUST00000174592 Neo1P97798 1493 aa16.19■□□□□ 0.18
Ccdc28a-205ENSMUST00000174592 MlecQ6ZQI3 291 aaKnown RBP16.17■□□□□ 0.18
Ccdc28a-205ENSMUST00000174592 AdgbG3UZ78 1657 aa16.15■□□□□ 0.18
Ccdc28a-205ENSMUST00000174592 Dnmt1P13864 1620 aaKnown RBP16.14■□□□□ 0.17
Ccdc28a-205ENSMUST00000174592 Pla2r1Q62028 1487 aa16.14■□□□□ 0.17
Ccdc28a-205ENSMUST00000174592 Clasp1Q80TV8 1535 aaKnown RBP16.14■□□□□ 0.17
Ccdc28a-205ENSMUST00000174592 Mapkbp1Q6NS57 1503 aa16.1■□□□□ 0.17
Ccdc28a-205ENSMUST00000174592 Arid3cA6PWV5 409 aa16.09■□□□□ 0.17
Ccdc28a-205ENSMUST00000174592 Ttc37F8VPK0 1563 aa16.09■□□□□ 0.17
Ccdc28a-205ENSMUST00000174592 Gpatch8A2A6A1 1505 aa16.05■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 Fbxo41Q6NS60 873 aa16.05■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 Cypt1Q8CH20 168 aa16.05■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 BC005561E9Q5E2 1589 aa16.04■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 Map3k4O08648 1597 aa16.03■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 Arhgef12Q8R4H2 1543 aaKnown RBP16.03■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 Zeb1Q64318 1117 aa16.02■□□□□ 0.16
Ccdc28a-205ENSMUST00000174592 Depdc5P61460 1591 aa16.01■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 SynmQ70IV5 1561 aa16.01■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Abcc2Q8VI47 1543 aa16.01■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Jph4Q80WT0 628 aa16.01■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Fkbp15Q6P9Q6 1216 aaKnown RBP16■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Ercc6l2Q9JIM3 1537 aa15.99■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 NrkQ9R0G8 1455 aa15.99■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Dnajc5gQ8C632 165 aa15.99■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Fndc1E9Q043 1732 aa15.99■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 Zfyve16Q80U44 1528 aa15.98■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 PxdnQ3UQ28 1475 aa15.97■□□□□ 0.15
Ccdc28a-205ENSMUST00000174592 TchhA0A0B4J1F9 1599 aa15.96■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 Hecw2Q6I6G8 1578 aa15.95■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 Abca16E9PWJ7 1678 aa15.95■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 Igf1rQ60751 1373 aa15.94■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 Brwd3A2AHJ4 1799 aa15.92■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 WizO88286 1684 aaKnown RBP15.91■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 Slx4Q6P1D7 1565 aa15.9■□□□□ 0.14
Ccdc28a-205ENSMUST00000174592 Shroom4Q1W617 1475 aa15.88■□□□□ 0.13
Ccdc28a-205ENSMUST00000174592 Lrrc9Q8CDN9 1456 aa15.87■□□□□ 0.13
Ccdc28a-205ENSMUST00000174592 Adamts12Q811B3 1600 aa15.85■□□□□ 0.13
Ccdc28a-205ENSMUST00000174592 Eif4g1Q6NZJ6 1600 aaKnown RBP15.84■□□□□ 0.13
Ccdc28a-205ENSMUST00000174592 Kdm6bQ5NCY0 1641 aa15.82■□□□□ 0.12
Ccdc28a-205ENSMUST00000174592 Rpap1Q80TE0 1409 aa15.81■□□□□ 0.12
Ccdc28a-205ENSMUST00000174592 Znf608Q56A10 1511 aa15.8■□□□□ 0.12
Ccdc28a-205ENSMUST00000174592 Wdr7Q920I9 1489 aa15.78■□□□□ 0.12
Ccdc28a-205ENSMUST00000174592 Kdm5bQ80Y84 1544 aa15.74■□□□□ 0.11
Ccdc28a-205ENSMUST00000174592 Naip2Q9QUK4 1447 aa15.74■□□□□ 0.11
Ccdc28a-205ENSMUST00000174592 Rnf17Q99MV7 1640 aa15.73■□□□□ 0.11
Ccdc28a-205ENSMUST00000174592 AglF8VPN4 1532 aa15.73■□□□□ 0.11
Ccdc28a-205ENSMUST00000174592 Gm7298A0A0N4SVU1 1476 aa15.7■□□□□ 0.1
Ccdc28a-205ENSMUST00000174592 WrnO09053 1401 aa15.68■□□□□ 0.1
Ccdc28a-205ENSMUST00000174592 Rrbp1Q99PL5 1605 aaKnown RBP15.65■□□□□ 0.1
Ccdc28a-205ENSMUST00000174592 Mroh2bQ7M6Y6 1581 aa15.65■□□□□ 0.1
Ccdc28a-205ENSMUST00000174592 MyclP10166 368 aa15.64■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 Atp10dQ8K2X1 1416 aa15.64■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 PtprmP28828 1452 aa15.63■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 Npm2Q80W85 207 aa15.62■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 Abca5Q8K448 1642 aa15.61■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 Ecm2Q5FW85 670 aa15.61■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 Carmil1Q6EDY6 1374 aa15.59■□□□□ 0.09
Ccdc28a-205ENSMUST00000174592 A2mQ6GQT1 1474 aa15.58■□□□□ 0.08
Ccdc28a-205ENSMUST00000174592 NhsB1AV60 1647 aa15.57■□□□□ 0.08
Ccdc28a-205ENSMUST00000174592 GapdhsQ64467 440 aa15.56■□□□□ 0.08
Ccdc28a-205ENSMUST00000174592 Arhgap31A6X8Z5 1425 aa15.54■□□□□ 0.08
Ccdc28a-205ENSMUST00000174592 Map3k1P53349 1493 aa15.52■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Safb2Q80YR5 991 aaKnown RBP15.51■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Chic1Q8CBW7 227 aa15.51■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Synj2Q9D2G5 1434 aa15.48■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Cul7Q8VE73 1689 aa15.48■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Camsap2Q8C1B1 1461 aa15.47■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Ccdc141E9Q8Q6 1531 aa15.47■□□□□ 0.07
Ccdc28a-205ENSMUST00000174592 Neurl4Q5NCX5 1563 aa15.45■□□□□ 0.06
Ccdc28a-205ENSMUST00000174592 Polr1aO35134 1717 aaKnown RBP15.45■□□□□ 0.06
Ccdc28a-205ENSMUST00000174592 Ahdc1Q6PAL7 1594 aaKnown RBP15.45■□□□□ 0.06
Ccdc28a-205ENSMUST00000174592 Kif14L0N7N1 1674 aaKnown RBP15.43■□□□□ 0.06
Ccdc28a-205ENSMUST00000174592 Qser1A2BIE1 1698 aa15.39■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Abca8bQ8K440 1620 aa15.39■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 SphkapQ6NSW3 1687 aa15.38■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Mlh3A0A1Y7VMP7 1443 aa15.37■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Fancd2Q80V62 1450 aa15.36■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Mapk8ip2Q9ERE9 830 aa15.36■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Adamtsl3G3UXC7 1706 aa15.35■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Kiaa1210E9Q0C6 1637 aa15.34■□□□□ 0.05
Ccdc28a-205ENSMUST00000174592 Gcc2Q8CHG3 1679 aa15.34■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms