RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 AknaQ80VW7 1404 aa36.09■■■■□ 3.37
Ltb-203ENSMUST00000173600 Gpatch8A2A6A1 1505 aa36.09■■■■□ 3.37
Ltb-203ENSMUST00000173600 PtprtQ99M80 1454 aa36.08■■■■□ 3.37
Ltb-203ENSMUST00000173600 SynmQ70IV5 1561 aa36.07■■■■□ 3.37
Ltb-203ENSMUST00000173600 Abcc1O35379 1528 aa36.04■■■■□ 3.36
Ltb-203ENSMUST00000173600 Chic1Q8CBW7 227 aa35.99■■■■□ 3.35
Ltb-203ENSMUST00000173600 Chd1P40201 1711 aa35.91■■■■□ 3.34
Ltb-203ENSMUST00000173600 Ythdc2B2RR83 1445 aaKnown RBP35.88■■■■□ 3.33
Ltb-203ENSMUST00000173600 CadpsQ80TJ1 1355 aa35.84■■■■□ 3.33
Ltb-203ENSMUST00000173600 Dnmt1P13864 1620 aaKnown RBP35.83■■■■□ 3.33
Ltb-203ENSMUST00000173600 Zeb1Q64318 1117 aa35.82■■■■□ 3.32
Ltb-203ENSMUST00000173600 Pprc1Q6NZN1 1644 aa35.8■■■■□ 3.32
Ltb-203ENSMUST00000173600 Abca16E9PWJ7 1678 aa35.8■■■■□ 3.32
Ltb-203ENSMUST00000173600 Rapgef2Q8CHG7 1496 aa35.8■■■■□ 3.32
Ltb-203ENSMUST00000173600 Abcc2Q8VI47 1543 aa35.78■■■■□ 3.32
Ltb-203ENSMUST00000173600 WizO88286 1684 aaKnown RBP35.74■■■■□ 3.31
Ltb-203ENSMUST00000173600 Neo1P97798 1493 aa35.73■■■■□ 3.31
Ltb-203ENSMUST00000173600 TchhA0A0B4J1F9 1599 aa35.73■■■■□ 3.31
Ltb-203ENSMUST00000173600 BC005561E9Q5E2 1589 aa35.73■■■■□ 3.31
Ltb-203ENSMUST00000173600 Soga1E1U8D0 1418 aa35.72■■■■□ 3.31
Ltb-203ENSMUST00000173600 PxdnQ3UQ28 1475 aa35.72■■■■□ 3.31
Ltb-203ENSMUST00000173600 Arhgap27A2AB59 869 aa35.71■■■■□ 3.31
Ltb-203ENSMUST00000173600 Map3k4O08648 1597 aa35.7■■■■□ 3.31
Ltb-203ENSMUST00000173600 Plekhg3Q4VAC9 1341 aa35.64■■■■□ 3.3
Ltb-203ENSMUST00000173600 Adamts12Q811B3 1600 aa35.64■■■■□ 3.3
Ltb-203ENSMUST00000173600 EprsQ8CGC7 1512 aaKnown RBP35.61■■■■□ 3.29
Ltb-203ENSMUST00000173600 Mroh2bQ7M6Y6 1581 aa35.58■■■■□ 3.29
Ltb-203ENSMUST00000173600 Setbp1Q9Z180 1582 aa35.58■■■■□ 3.29
Ltb-203ENSMUST00000173600 Gm14025A2AP89 1413 aa35.57■■■■□ 3.29
Ltb-203ENSMUST00000173600 Eif4g1Q6NZJ6 1600 aaKnown RBP35.53■■■■□ 3.28
Ltb-203ENSMUST00000173600 Npm2Q80W85 207 aa35.47■■■■□ 3.27
Ltb-203ENSMUST00000173600 Slx4Q6P1D7 1565 aa35.46■■■■□ 3.27
Ltb-203ENSMUST00000173600 Ppp1r18Q8BQ30 594 aa35.45■■■■□ 3.27
Ltb-203ENSMUST00000173600 Ak9G3UYQ4 1894 aa35.44■■■■□ 3.26
Ltb-203ENSMUST00000173600 AI481877A2ALV5 1481 aa35.42■■■■□ 3.26
Ltb-203ENSMUST00000173600 Arhgef12Q8R4H2 1543 aaKnown RBP35.41■■■■□ 3.26
Ltb-203ENSMUST00000173600 Rpap1Q80TE0 1409 aa35.36■■■■□ 3.25
Ltb-203ENSMUST00000173600 Carmil1Q6EDY6 1374 aa35.31■■■■□ 3.24
Ltb-203ENSMUST00000173600 Ifnlr1Q8CGK5 535 aa35.3■■■■□ 3.24
Ltb-203ENSMUST00000173600 Gm7298A0A0N4SVU1 1476 aa35.28■■■■□ 3.24
Ltb-203ENSMUST00000173600 Jph4Q80WT0 628 aa35.25■■■■□ 3.23
Ltb-203ENSMUST00000173600 Map3k1P53349 1493 aa35.24■■■■□ 3.23
Ltb-203ENSMUST00000173600 Abca5Q8K448 1642 aa35.19■■■■□ 3.22
Ltb-203ENSMUST00000173600 Arhgap35Q91YM2 1499 aa35.18■■■■□ 3.22
Ltb-203ENSMUST00000173600 Fkbp15Q6P9Q6 1216 aaKnown RBP35.14■■■■□ 3.22
Ltb-203ENSMUST00000173600 Clasp1Q80TV8 1535 aaKnown RBP35.09■■■■□ 3.21
Ltb-203ENSMUST00000173600 Polr1aO35134 1717 aaKnown RBP35.08■■■■□ 3.21
Ltb-203ENSMUST00000173600 WrnO09053 1401 aa35.05■■■■□ 3.2
Ltb-203ENSMUST00000173600 Ttc37F8VPK0 1563 aa35.04■■■■□ 3.2
Ltb-203ENSMUST00000173600 Gab3Q8BSM5 595 aa35.02■■■■□ 3.2
Ltb-203ENSMUST00000173600 AdgbG3UZ78 1657 aa35■■■■□ 3.19
Ltb-203ENSMUST00000173600 Arid3cA6PWV5 409 aa34.99■■■■□ 3.19
Ltb-203ENSMUST00000173600 Rrbp1Q99PL5 1605 aaKnown RBP34.99■■■■□ 3.19
Ltb-203ENSMUST00000173600 Lrrc9Q8CDN9 1456 aa34.98■■■■□ 3.19
Ltb-203ENSMUST00000173600 Cux1P53564 1515 aa34.97■■■■□ 3.19
Ltb-203ENSMUST00000173600 Mapkbp1Q6NS57 1503 aa34.96■■■■□ 3.19
Ltb-203ENSMUST00000173600 Kdm5bQ80Y84 1544 aa34.93■■■■□ 3.18
Ltb-203ENSMUST00000173600 Znf608Q56A10 1511 aa34.92■■■■□ 3.18
Ltb-203ENSMUST00000173600 Depdc5P61460 1591 aa34.91■■■■□ 3.18
Ltb-203ENSMUST00000173600 Igf1rQ60751 1373 aa34.89■■■■□ 3.18
Ltb-203ENSMUST00000173600 Clip1Q922J3 1391 aa34.87■■■■□ 3.17
Ltb-203ENSMUST00000173600 Plppr3Q7TPB0 716 aa34.82■■■■□ 3.16
Ltb-203ENSMUST00000173600 Wdr7Q920I9 1489 aa34.8■■■■□ 3.16
Ltb-203ENSMUST00000173600 Cul7Q8VE73 1689 aa34.78■■■■□ 3.16
Ltb-203ENSMUST00000173600 Zfyve16Q80U44 1528 aa34.77■■■■□ 3.16
Ltb-203ENSMUST00000173600 Cep162Q6ZQ06 1403 aa34.77■■■■□ 3.16
Ltb-203ENSMUST00000173600 Fyco1Q8VDC1 1437 aa34.77■■■■□ 3.16
Ltb-203ENSMUST00000173600 Alpk3Q924C5 1678 aa34.76■■■■□ 3.16
Ltb-203ENSMUST00000173600 NhsB1AV60 1647 aa34.75■■■■□ 3.15
Ltb-203ENSMUST00000173600 Arhgef11Q68FM7 1552 aa34.74■■■■□ 3.15
Ltb-203ENSMUST00000173600 Arhgap31A6X8Z5 1425 aa34.73■■■■□ 3.15
Ltb-203ENSMUST00000173600 HrcG5E8J6 738 aa34.73■■■■□ 3.15
Ltb-203ENSMUST00000173600 Ccdc141E9Q8Q6 1531 aa34.69■■■■□ 3.14
Ltb-203ENSMUST00000173600 Fndc1E9Q043 1732 aa34.67■■■■□ 3.14
Ltb-203ENSMUST00000173600 Myt1lP97500 1187 aa34.67■■■■□ 3.14
Ltb-203ENSMUST00000173600 Cyb5rlB1AS42 316 aa34.61■■■■□ 3.13
Ltb-203ENSMUST00000173600 Atp10dQ8K2X1 1416 aa34.61■■■■□ 3.13
Ltb-203ENSMUST00000173600 Mroh2aD3Z750 1679 aa34.57■■■■□ 3.12
Ltb-203ENSMUST00000173600 MlecQ6ZQI3 291 aaKnown RBP34.54■■■■□ 3.12
Ltb-203ENSMUST00000173600 Gcc2Q8CHG3 1679 aa34.54■■■■□ 3.12
Ltb-203ENSMUST00000173600 Ankrd26Q811D2 1581 aa34.53■■■■□ 3.12
Ltb-203ENSMUST00000173600 Dnajc5gQ8C632 165 aa34.51■■■■□ 3.12
Ltb-203ENSMUST00000173600 AglF8VPN4 1532 aa34.5■■■■□ 3.11
Ltb-203ENSMUST00000173600 Rapgef6Q5NCJ1 1609 aa34.45■■■■□ 3.11
Ltb-203ENSMUST00000173600 Kiaa1210E9Q0C6 1637 aa34.4■■■■□ 3.1
Ltb-203ENSMUST00000173600 Ncoa2Q61026 1462 aa34.39■■■■□ 3.1
Ltb-203ENSMUST00000173600 Fancd2Q80V62 1450 aa34.39■■■■□ 3.1
Ltb-203ENSMUST00000173600 Abca8bQ8K440 1620 aa34.38■■■■□ 3.09
Ltb-203ENSMUST00000173600 BlmO88700 1416 aa34.38■■■■□ 3.09
Ltb-203ENSMUST00000173600 Aebp1Q640N1 1128 aa34.35■■■■□ 3.09
Ltb-203ENSMUST00000173600 Kif27Q7M6Z4 1394 aa34.33■■■■□ 3.09
Ltb-203ENSMUST00000173600 Arap1Q4LDD4 1452 aa34.31■■■■□ 3.08
Ltb-203ENSMUST00000173600 A2mQ6GQT1 1474 aa34.27■■■■□ 3.08
Ltb-203ENSMUST00000173600 Rnf17Q99MV7 1640 aa34.26■■■■□ 3.08
Ltb-203ENSMUST00000173600 Magi1Q6RHR9 1471 aa34.26■■■■□ 3.07
Ltb-203ENSMUST00000173600 Prex2Q3LAC4 1598 aa34.22■■■■□ 3.07
Ltb-203ENSMUST00000173600 Ercc6l2Q9JIM3 1537 aa34.19■■■■□ 3.06
Ltb-203ENSMUST00000173600 Lmo7E9PYF4 1699 aaKnown RBP34.17■■■■□ 3.06
Ltb-203ENSMUST00000173600 Erich3F6QRE9 1637 aa34.16■■■■□ 3.06
Ltb-203ENSMUST00000173600 Setd5Q5XJV7 1441 aa34.14■■■■□ 3.06
Retrieved 100 of 22,080 RNA–protein pairs in 101.3 ms