RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Ncapd3Q6ZQK0 1506 aa9.28□□□□□ -0.92
Lig4-202ENSMUST00000170033 Peg3Q3URU2 1571 aa9.28□□□□□ -0.92
Lig4-202ENSMUST00000170033 Eea1Q8BL66 1411 aa9.28□□□□□ -0.92
Lig4-202ENSMUST00000170033 Grin2bQ01097 1482 aa9.27□□□□□ -0.93
Lig4-202ENSMUST00000170033 Mroh2bQ7M6Y6 1581 aa9.25□□□□□ -0.93
Lig4-202ENSMUST00000170033 Clip1Q922J3 1391 aa9.25□□□□□ -0.93
Lig4-202ENSMUST00000170033 Ncbp3Q8BZR9 615 aaKnown RBP9.25□□□□□ -0.93
Lig4-202ENSMUST00000170033 Tiam1Q60610 1591 aa9.25□□□□□ -0.93
Lig4-202ENSMUST00000170033 Fam135aQ6NS59 1506 aa9.24□□□□□ -0.93
Lig4-202ENSMUST00000170033 Anks4bQ8K3X6 423 aa9.23□□□□□ -0.93
Lig4-202ENSMUST00000170033 Polr1aO35134 1717 aaKnown RBP9.23□□□□□ -0.93
Lig4-202ENSMUST00000170033 Phldb1Q6PDH0 1371 aaKnown RBP9.22□□□□□ -0.93
Lig4-202ENSMUST00000170033 Lmo7E9PYF4 1699 aaKnown RBP9.22□□□□□ -0.93
Lig4-202ENSMUST00000170033 Kif21aQ9QXL2 1672 aa9.22□□□□□ -0.93
Lig4-202ENSMUST00000170033 Efcab5A0JP43 1406 aa9.22□□□□□ -0.93
Lig4-202ENSMUST00000170033 BccipQ9CWI3 316 aa9.21□□□□□ -0.94
Lig4-202ENSMUST00000170033 Kif15Q6P9L6 1387 aa9.2□□□□□ -0.94
Lig4-202ENSMUST00000170033 Arap1Q4LDD4 1452 aa9.2□□□□□ -0.94
Lig4-202ENSMUST00000170033 PtprkP35822 1457 aa9.19□□□□□ -0.94
Lig4-202ENSMUST00000170033 Gpatch8A2A6A1 1505 aa9.19□□□□□ -0.94
Lig4-202ENSMUST00000170033 Kdm5bQ80Y84 1544 aa9.19□□□□□ -0.94
Lig4-202ENSMUST00000170033 Ankrd26Q811D2 1581 aa9.19□□□□□ -0.94
Lig4-202ENSMUST00000170033 Rpap1Q80TE0 1409 aa9.18□□□□□ -0.94
Lig4-202ENSMUST00000170033 Npm2Q80W85 207 aa9.17□□□□□ -0.94
Lig4-202ENSMUST00000170033 Fam71e1A1L3C1 212 aa9.16□□□□□ -0.94
Lig4-202ENSMUST00000170033 Cux1P53564 1515 aa9.15□□□□□ -0.94
Lig4-202ENSMUST00000170033 Carmil1Q6EDY6 1374 aa9.15□□□□□ -0.95
Lig4-202ENSMUST00000170033 Podxl2Q8CAE9 603 aa9.14□□□□□ -0.95
Lig4-202ENSMUST00000170033 CntlnA2AM05 1397 aa9.13□□□□□ -0.95
Lig4-202ENSMUST00000170033 ClspnQ80YR7 1315 aa9.13□□□□□ -0.95
Lig4-202ENSMUST00000170033 Setd5Q5XJV7 1441 aa9.13□□□□□ -0.95
Lig4-202ENSMUST00000170033 Pcf11G3X9Z4 1553 aa9.12□□□□□ -0.95
Lig4-202ENSMUST00000170033 SynmQ70IV5 1561 aa9.12□□□□□ -0.95
Lig4-202ENSMUST00000170033 PogzQ8BZH4 1409 aaKnown RBP9.12□□□□□ -0.95
Lig4-202ENSMUST00000170033 Samd1D3YXK1 519 aa9.11□□□□□ -0.95
Lig4-202ENSMUST00000170033 Naip1Q9QWK5 1403 aa9.11□□□□□ -0.95
Lig4-202ENSMUST00000170033 Urb2E9Q7L1 1524 aaKnown RBP9.1□□□□□ -0.95
Lig4-202ENSMUST00000170033 Scaf1Q5U4C3 1256 aaKnown RBP9.1□□□□□ -0.95
Lig4-202ENSMUST00000170033 EprsQ8CGC7 1512 aaKnown RBP9.1□□□□□ -0.95
Lig4-202ENSMUST00000170033 Fyco1Q8VDC1 1437 aa9.09□□□□□ -0.95
Lig4-202ENSMUST00000170033 Fhod3Q76LL6 1578 aa9.09□□□□□ -0.95
Lig4-202ENSMUST00000170033 Ccer2J3QPU5 274 aa9.09□□□□□ -0.95
Lig4-202ENSMUST00000170033 Hdac5Q9Z2V6 1113 aa9.09□□□□□ -0.95
Lig4-202ENSMUST00000170033 Camsap2Q8C1B1 1461 aa9.08□□□□□ -0.96
Lig4-202ENSMUST00000170033 TonslQ6NZL6 1363 aa9.08□□□□□ -0.96
Lig4-202ENSMUST00000170033 LrpprcQ6PB66 1392 aaKnown RBP9.08□□□□□ -0.96
Lig4-202ENSMUST00000170033 Ankrd36D3Z4K0 1415 aa9.08□□□□□ -0.96
Lig4-202ENSMUST00000170033 Skap1Q3UUV5 355 aa9.08□□□□□ -0.96
Lig4-202ENSMUST00000170033 Mapk8ip2Q9ERE9 830 aa9.08□□□□□ -0.96
Lig4-202ENSMUST00000170033 Crocc2F6XLV1 1638 aa9.07□□□□□ -0.96
Lig4-202ENSMUST00000170033 Cux2P70298 1426 aa9.07□□□□□ -0.96
Lig4-202ENSMUST00000170033 Pbrm1Q8BSQ9 1634 aaKnown RBP9.07□□□□□ -0.96
Lig4-202ENSMUST00000170033 Fgd1P52734 960 aa9.07□□□□□ -0.96
Lig4-202ENSMUST00000170033 Prdm10Q3UTQ7 1184 aa9.07□□□□□ -0.96
Lig4-202ENSMUST00000170033 Duox2A2AQ99 1517 aa9.06□□□□□ -0.96
Lig4-202ENSMUST00000170033 Slx4Q6P1D7 1565 aa9.06□□□□□ -0.96
Lig4-202ENSMUST00000170033 Sall2Q9QX96 1004 aa9.06□□□□□ -0.96
Lig4-202ENSMUST00000170033 Mia2Q91ZV0 1396 aa9.06□□□□□ -0.96
Lig4-202ENSMUST00000170033 Myt1lP97500 1187 aa9.06□□□□□ -0.96
Lig4-202ENSMUST00000170033 Zfp777B9EKF4 885 aa9.05□□□□□ -0.96
Lig4-202ENSMUST00000170033 Zeb1Q64318 1117 aa9.05□□□□□ -0.96
Lig4-202ENSMUST00000170033 Fhad1A6PWD2 1420 aa9.05□□□□□ -0.96
Lig4-202ENSMUST00000170033 BlmO88700 1416 aa9.05□□□□□ -0.96
Lig4-202ENSMUST00000170033 UacaQ8CGB3 1411 aa9.04□□□□□ -0.96
Lig4-202ENSMUST00000170033 Gcc2Q8CHG3 1679 aa9.04□□□□□ -0.96
Lig4-202ENSMUST00000170033 Cul7Q8VE73 1689 aa9.04□□□□□ -0.96
Lig4-202ENSMUST00000170033 Abca5Q8K448 1642 aa9.03□□□□□ -0.96
Lig4-202ENSMUST00000170033 Vps8Q0P5W1 1427 aa9.02□□□□□ -0.96
Lig4-202ENSMUST00000170033 Samd9lQ69Z37 1561 aa9.01□□□□□ -0.97
Lig4-202ENSMUST00000170033 Lmtk2Q3TYD6 1471 aa9□□□□□ -0.97
Lig4-202ENSMUST00000170033 Adamts12Q811B3 1600 aa8.98□□□□□ -0.97
Lig4-202ENSMUST00000170033 Taok2Q6ZQ29 1240 aa8.98□□□□□ -0.97
Lig4-202ENSMUST00000170033 Npm1Q61937 292 aaKnown RBP8.97□□□□□ -0.97
Lig4-202ENSMUST00000170033 Plekhg3Q4VAC9 1341 aa8.97□□□□□ -0.97
Lig4-202ENSMUST00000170033 Gm1043A0A140LJC2 1431 aa8.96□□□□□ -0.97
Lig4-202ENSMUST00000170033 Irx6Q9ER75 438 aa8.96□□□□□ -0.98
Lig4-202ENSMUST00000170033 Rfx7F8VPJ6 1459 aa8.96□□□□□ -0.98
Lig4-202ENSMUST00000170033 Plcd4Q8K3R3 807 aa8.95□□□□□ -0.98
Lig4-202ENSMUST00000170033 Naip2Q9QUK4 1447 aa8.94□□□□□ -0.98
Lig4-202ENSMUST00000170033 SafbD3YXK2 937 aaKnown RBP8.94□□□□□ -0.98
Lig4-202ENSMUST00000170033 Cdk11bP24788 784 aaKnown RBP8.94□□□□□ -0.98
Lig4-202ENSMUST00000170033 Mrc2Q64449 1479 aa8.93□□□□□ -0.98
Lig4-202ENSMUST00000170033 Dhx29Q6PGC1 1365 aaKnown RBP8.93□□□□□ -0.98
Lig4-202ENSMUST00000170033 Setbp1Q9Z180 1582 aa8.93□□□□□ -0.98
Lig4-202ENSMUST00000170033 Ubl4bQ9CQ84 188 aa8.93□□□□□ -0.98
Lig4-202ENSMUST00000170033 Il27Q8K3I6 234 aa8.92□□□□□ -0.98
Lig4-202ENSMUST00000170033 3425401B19RikD3Z1D3 1412 aa8.91□□□□□ -0.98
Lig4-202ENSMUST00000170033 Gm7298A0A0N4SVU1 1476 aa8.91□□□□□ -0.98
Lig4-202ENSMUST00000170033 Pla2r1Q62028 1487 aa8.91□□□□□ -0.98
Lig4-202ENSMUST00000170033 Kif21bQ9QXL1 1668 aa8.91□□□□□ -0.98
Lig4-202ENSMUST00000170033 Lamc1P02468 1607 aaKnown RBP8.91□□□□□ -0.98
Lig4-202ENSMUST00000170033 Nop58Q6DFW4 536 aaKnown RBP8.9□□□□□ -0.98
Lig4-202ENSMUST00000170033 Aebp2Q9Z248 504 aaKnown RBP8.9□□□□□ -0.98
Lig4-202ENSMUST00000170033 Magi3Q9EQJ9 1476 aa8.9□□□□□ -0.98
Lig4-202ENSMUST00000170033 Soga1E1U8D0 1418 aa8.9□□□□□ -0.98
Lig4-202ENSMUST00000170033 Znf692Q3U381 531 aa8.9□□□□□ -0.98
Lig4-202ENSMUST00000170033 Wdr66E9Q743 1299 aa8.89□□□□□ -0.99
Lig4-202ENSMUST00000170033 Setd1bQ8CFT2 1985 aa8.89□□□□□ -0.99
Lig4-202ENSMUST00000170033 Igsf3Q6ZQA6 1194 aa8.89□□□□□ -0.99
Lig4-202ENSMUST00000170033 Znf316Q6PGE4 1016 aa8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms