RNA–Protein interactions for RNA: ENSMUST00000167721.7

Actb-207, Transcript of Actin, cytoplasmic 1, mousemouse

TSL 5 BASIC

Gene Actb, Length 1,242 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-207ENSMUST00000167721 Pcdh10E9PXQ7 1057 aa17.11■□□□□ 0.33
Actb-207ENSMUST00000167721 Gm156Q58A37 223 aa17.1■□□□□ 0.33
Actb-207ENSMUST00000167721 NrkQ9R0G8 1455 aa17.09■□□□□ 0.33
Actb-207ENSMUST00000167721 PtprtQ99M80 1454 aa17.07■□□□□ 0.32
Actb-207ENSMUST00000167721 Hoxd11P23813 323 aa17.07■□□□□ 0.32
Actb-207ENSMUST00000167721 AknaQ80VW7 1404 aa17.06■□□□□ 0.32
Actb-207ENSMUST00000167721 Fam163aQ8CAA5 168 aa17.06■□□□□ 0.32
Actb-207ENSMUST00000167721 Gpatch8A2A6A1 1505 aa17.06■□□□□ 0.32
Actb-207ENSMUST00000167721 Trap1aP19473 224 aa17.05■□□□□ 0.32
Actb-207ENSMUST00000167721 Abcc1O35379 1528 aa17.05■□□□□ 0.32
Actb-207ENSMUST00000167721 Top2aQ01320 1528 aaKnown RBP17.04■□□□□ 0.32
Actb-207ENSMUST00000167721 Pla2r1Q62028 1487 aa17.03■□□□□ 0.32
Actb-207ENSMUST00000167721 SynmQ70IV5 1561 aa17.01■□□□□ 0.31
Actb-207ENSMUST00000167721 Shroom4Q1W617 1475 aa17■□□□□ 0.31
Actb-207ENSMUST00000167721 Ccdc88bQ4QRL3 1481 aa17■□□□□ 0.31
Actb-207ENSMUST00000167721 CadpsQ80TJ1 1355 aa16.99■□□□□ 0.31
Actb-207ENSMUST00000167721 Ythdc2B2RR83 1445 aaKnown RBP16.97■□□□□ 0.31
Actb-207ENSMUST00000167721 Chd1P40201 1711 aa16.97■□□□□ 0.31
Actb-207ENSMUST00000167721 Pprc1Q6NZN1 1644 aa16.95■□□□□ 0.3
Actb-207ENSMUST00000167721 Rapgef2Q8CHG7 1496 aa16.94■□□□□ 0.3
Actb-207ENSMUST00000167721 Dnmt1P13864 1620 aaKnown RBP16.92■□□□□ 0.3
Actb-207ENSMUST00000167721 Soga1E1U8D0 1418 aa16.91■□□□□ 0.3
Actb-207ENSMUST00000167721 Zeb1Q64318 1117 aa16.9■□□□□ 0.3
Actb-207ENSMUST00000167721 Abca16E9PWJ7 1678 aa16.88■□□□□ 0.29
Actb-207ENSMUST00000167721 TchhA0A0B4J1F9 1599 aa16.87■□□□□ 0.29
Actb-207ENSMUST00000167721 Neo1P97798 1493 aa16.86■□□□□ 0.29
Actb-207ENSMUST00000167721 Abcc2Q8VI47 1543 aa16.86■□□□□ 0.29
Actb-207ENSMUST00000167721 Map3k4O08648 1597 aa16.85■□□□□ 0.29
Actb-207ENSMUST00000167721 Setbp1Q9Z180 1582 aa16.85■□□□□ 0.29
Actb-207ENSMUST00000167721 Arhgap27A2AB59 869 aa16.85■□□□□ 0.29
Actb-207ENSMUST00000167721 BC005561E9Q5E2 1589 aa16.85■□□□□ 0.29
Actb-207ENSMUST00000167721 Gm14025A2AP89 1413 aa16.84■□□□□ 0.29
Actb-207ENSMUST00000167721 WizO88286 1684 aaKnown RBP16.84■□□□□ 0.29
Actb-207ENSMUST00000167721 PxdnQ3UQ28 1475 aa16.81■□□□□ 0.28
Actb-207ENSMUST00000167721 Adamts12Q811B3 1600 aa16.81■□□□□ 0.28
Actb-207ENSMUST00000167721 Ak9G3UYQ4 1894 aa16.78■□□□□ 0.28
Actb-207ENSMUST00000167721 EprsQ8CGC7 1512 aaKnown RBP16.78■□□□□ 0.28
Actb-207ENSMUST00000167721 AI481877A2ALV5 1481 aa16.78■□□□□ 0.28
Actb-207ENSMUST00000167721 Ppp1r18Q8BQ30 594 aa16.77■□□□□ 0.28
Actb-207ENSMUST00000167721 Mroh2bQ7M6Y6 1581 aa16.75■□□□□ 0.27
Actb-207ENSMUST00000167721 Arhgef12Q8R4H2 1543 aaKnown RBP16.75■□□□□ 0.27
Actb-207ENSMUST00000167721 Eif4g1Q6NZJ6 1600 aaKnown RBP16.74■□□□□ 0.27
Actb-207ENSMUST00000167721 Slx4Q6P1D7 1565 aa16.72■□□□□ 0.27
Actb-207ENSMUST00000167721 Npm2Q80W85 207 aa16.69■□□□□ 0.26
Actb-207ENSMUST00000167721 Rpap1Q80TE0 1409 aa16.66■□□□□ 0.26
Actb-207ENSMUST00000167721 Ifnlr1Q8CGK5 535 aa16.66■□□□□ 0.26
Actb-207ENSMUST00000167721 Jph4Q80WT0 628 aa16.65■□□□□ 0.26
Actb-207ENSMUST00000167721 Carmil1Q6EDY6 1374 aa16.64■□□□□ 0.26
Actb-207ENSMUST00000167721 Clasp1Q80TV8 1535 aaKnown RBP16.63■□□□□ 0.25
Actb-207ENSMUST00000167721 Gm7298A0A0N4SVU1 1476 aa16.62■□□□□ 0.25
Actb-207ENSMUST00000167721 AdgbG3UZ78 1657 aa16.62■□□□□ 0.25
Actb-207ENSMUST00000167721 Map3k1P53349 1493 aa16.61■□□□□ 0.25
Actb-207ENSMUST00000167721 Ttc37F8VPK0 1563 aa16.6■□□□□ 0.25
Actb-207ENSMUST00000167721 Plekhg3Q4VAC9 1341 aa16.58■□□□□ 0.24
Actb-207ENSMUST00000167721 Abca5Q8K448 1642 aa16.58■□□□□ 0.24
Actb-207ENSMUST00000167721 Polr1aO35134 1717 aaKnown RBP16.57■□□□□ 0.24
Actb-207ENSMUST00000167721 Mapkbp1Q6NS57 1503 aa16.56■□□□□ 0.24
Actb-207ENSMUST00000167721 Fkbp15Q6P9Q6 1216 aaKnown RBP16.55■□□□□ 0.24
Actb-207ENSMUST00000167721 Rrbp1Q99PL5 1605 aaKnown RBP16.55■□□□□ 0.24
Actb-207ENSMUST00000167721 Igf1rQ60751 1373 aa16.54■□□□□ 0.24
Actb-207ENSMUST00000167721 Arhgef11Q68FM7 1552 aa16.53■□□□□ 0.24
Actb-207ENSMUST00000167721 Arid3cA6PWV5 409 aa16.52■□□□□ 0.24
Actb-207ENSMUST00000167721 Lrrc9Q8CDN9 1456 aa16.52■□□□□ 0.23
Actb-207ENSMUST00000167721 WrnO09053 1401 aa16.52■□□□□ 0.23
Actb-207ENSMUST00000167721 Arhgap35Q91YM2 1499 aa16.51■□□□□ 0.23
Actb-207ENSMUST00000167721 Kdm5bQ80Y84 1544 aa16.5■□□□□ 0.23
Actb-207ENSMUST00000167721 Depdc5P61460 1591 aa16.5■□□□□ 0.23
Actb-207ENSMUST00000167721 Zfyve16Q80U44 1528 aa16.47■□□□□ 0.23
Actb-207ENSMUST00000167721 Wdr7Q920I9 1489 aa16.46■□□□□ 0.23
Actb-207ENSMUST00000167721 Znf608Q56A10 1511 aa16.45■□□□□ 0.22
Actb-207ENSMUST00000167721 Znf219Q6IQX8 726 aa16.43■□□□□ 0.22
Actb-207ENSMUST00000167721 Dmrt2Q8BG36 561 aa16.43■□□□□ 0.22
Actb-207ENSMUST00000167721 Cux1P53564 1515 aa16.42■□□□□ 0.22
Actb-207ENSMUST00000167721 Alpk3Q924C5 1678 aa16.41■□□□□ 0.22
Actb-207ENSMUST00000167721 Fndc1E9Q043 1732 aa16.41■□□□□ 0.22
Actb-207ENSMUST00000167721 NhsB1AV60 1647 aa16.41■□□□□ 0.22
Actb-207ENSMUST00000167721 Clip1Q922J3 1391 aa16.4■□□□□ 0.22
Actb-207ENSMUST00000167721 Fyco1Q8VDC1 1437 aa16.39■□□□□ 0.21
Actb-207ENSMUST00000167721 Cul7Q8VE73 1689 aa16.39■□□□□ 0.21
Actb-207ENSMUST00000167721 Arhgap31A6X8Z5 1425 aa16.38■□□□□ 0.21
Actb-207ENSMUST00000167721 Ccdc141E9Q8Q6 1531 aa16.37■□□□□ 0.21
Actb-207ENSMUST00000167721 Atp10dQ8K2X1 1416 aa16.35■□□□□ 0.21
Actb-207ENSMUST00000167721 AglF8VPN4 1532 aa16.35■□□□□ 0.21
Actb-207ENSMUST00000167721 Cep162Q6ZQ06 1403 aa16.3■□□□□ 0.2
Actb-207ENSMUST00000167721 Gcc2Q8CHG3 1679 aa16.29■□□□□ 0.2
Actb-207ENSMUST00000167721 Kiaa1210E9Q0C6 1637 aa16.27■□□□□ 0.19
Actb-207ENSMUST00000167721 Mroh2aD3Z750 1679 aa16.26■□□□□ 0.19
Actb-207ENSMUST00000167721 Myt1lP97500 1187 aa16.25■□□□□ 0.19
Actb-207ENSMUST00000167721 Ncoa2Q61026 1462 aa16.24■□□□□ 0.19
Actb-207ENSMUST00000167721 Abca8bQ8K440 1620 aa16.24■□□□□ 0.19
Actb-207ENSMUST00000167721 Rnf17Q99MV7 1640 aa16.24■□□□□ 0.19
Actb-207ENSMUST00000167721 Dnajc5gQ8C632 165 aa16.24■□□□□ 0.19
Actb-207ENSMUST00000167721 Rapgef6Q5NCJ1 1609 aa16.23■□□□□ 0.19
Actb-207ENSMUST00000167721 Fancd2Q80V62 1450 aa16.23■□□□□ 0.19
Actb-207ENSMUST00000167721 MlecQ6ZQI3 291 aaKnown RBP16.22■□□□□ 0.19
Actb-207ENSMUST00000167721 BlmO88700 1416 aa16.21■□□□□ 0.19
Actb-207ENSMUST00000167721 A2mQ6GQT1 1474 aa16.2■□□□□ 0.18
Actb-207ENSMUST00000167721 Ankrd26Q811D2 1581 aa16.2■□□□□ 0.18
Actb-207ENSMUST00000167721 Arap1Q4LDD4 1452 aa16.17■□□□□ 0.18
Actb-207ENSMUST00000167721 Chrna2Q91X60 512 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms