RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 PtprtQ99M80 1454 aa37.77■■■■□ 3.64
Shox2-204ENSMUST00000162439 Shroom4Q1W617 1475 aa37.77■■■■□ 3.64
Shox2-204ENSMUST00000162439 Abcc1O35379 1528 aa37.76■■■■□ 3.63
Shox2-204ENSMUST00000162439 Chic1Q8CBW7 227 aa37.75■■■■□ 3.63
Shox2-204ENSMUST00000162439 SynmQ70IV5 1561 aa37.72■■■■□ 3.63
Shox2-204ENSMUST00000162439 Gpatch8A2A6A1 1505 aa37.71■■■■□ 3.63
Shox2-204ENSMUST00000162439 Ythdc2B2RR83 1445 aaKnown RBP37.67■■■■□ 3.62
Shox2-204ENSMUST00000162439 CadpsQ80TJ1 1355 aa37.62■■■■□ 3.61
Shox2-204ENSMUST00000162439 Chd1P40201 1711 aa37.58■■■■□ 3.61
Shox2-204ENSMUST00000162439 Rapgef2Q8CHG7 1496 aa37.52■■■■□ 3.6
Shox2-204ENSMUST00000162439 Dnmt1P13864 1620 aaKnown RBP37.52■■■■□ 3.6
Shox2-204ENSMUST00000162439 Zeb1Q64318 1117 aa37.52■■■■□ 3.6
Shox2-204ENSMUST00000162439 Pprc1Q6NZN1 1644 aa37.51■■■■□ 3.6
Shox2-204ENSMUST00000162439 Arhgap27A2AB59 869 aa37.49■■■■□ 3.59
Shox2-204ENSMUST00000162439 Soga1E1U8D0 1418 aa37.46■■■■□ 3.59
Shox2-204ENSMUST00000162439 Abcc2Q8VI47 1543 aa37.46■■■■□ 3.59
Shox2-204ENSMUST00000162439 Abca16E9PWJ7 1678 aa37.42■■■■□ 3.58
Shox2-204ENSMUST00000162439 Neo1P97798 1493 aa37.41■■■■□ 3.58
Shox2-204ENSMUST00000162439 PxdnQ3UQ28 1475 aa37.39■■■■□ 3.58
Shox2-204ENSMUST00000162439 WizO88286 1684 aaKnown RBP37.38■■■■□ 3.57
Shox2-204ENSMUST00000162439 BC005561E9Q5E2 1589 aa37.34■■■■□ 3.57
Shox2-204ENSMUST00000162439 Map3k4O08648 1597 aa37.34■■■■□ 3.57
Shox2-204ENSMUST00000162439 TchhA0A0B4J1F9 1599 aa37.33■■■■□ 3.57
Shox2-204ENSMUST00000162439 Gm14025A2AP89 1413 aa37.3■■■■□ 3.56
Shox2-204ENSMUST00000162439 EprsQ8CGC7 1512 aaKnown RBP37.3■■■■□ 3.56
Shox2-204ENSMUST00000162439 Setbp1Q9Z180 1582 aa37.29■■■■□ 3.56
Shox2-204ENSMUST00000162439 Adamts12Q811B3 1600 aa37.28■■■■□ 3.56
Shox2-204ENSMUST00000162439 Mroh2bQ7M6Y6 1581 aa37.27■■■■□ 3.56
Shox2-204ENSMUST00000162439 Npm2Q80W85 207 aa37.15■■■■□ 3.54
Shox2-204ENSMUST00000162439 AI481877A2ALV5 1481 aa37.14■■■■□ 3.54
Shox2-204ENSMUST00000162439 Ppp1r18Q8BQ30 594 aa37.14■■■■□ 3.54
Shox2-204ENSMUST00000162439 Slx4Q6P1D7 1565 aa37.12■■■■□ 3.53
Shox2-204ENSMUST00000162439 Eif4g1Q6NZJ6 1600 aaKnown RBP37.12■■■■□ 3.53
Shox2-204ENSMUST00000162439 Ak9G3UYQ4 1894 aa37.1■■■■□ 3.53
Shox2-204ENSMUST00000162439 Arhgef12Q8R4H2 1543 aaKnown RBP37.06■■■■□ 3.52
Shox2-204ENSMUST00000162439 Ifnlr1Q8CGK5 535 aa37.05■■■■□ 3.52
Shox2-204ENSMUST00000162439 Rpap1Q80TE0 1409 aa37.04■■■■□ 3.52
Shox2-204ENSMUST00000162439 Jph4Q80WT0 628 aa37.04■■■■□ 3.52
Shox2-204ENSMUST00000162439 Carmil1Q6EDY6 1374 aa36.99■■■■□ 3.51
Shox2-204ENSMUST00000162439 Gm7298A0A0N4SVU1 1476 aa36.95■■■■□ 3.51
Shox2-204ENSMUST00000162439 Map3k1P53349 1493 aa36.93■■■■□ 3.5
Shox2-204ENSMUST00000162439 Fkbp15Q6P9Q6 1216 aaKnown RBP36.88■■■■□ 3.49
Shox2-204ENSMUST00000162439 Arhgap35Q91YM2 1499 aa36.82■■■■□ 3.48
Shox2-204ENSMUST00000162439 Clasp1Q80TV8 1535 aaKnown RBP36.77■■■■□ 3.48
Shox2-204ENSMUST00000162439 Abca5Q8K448 1642 aa36.77■■■■□ 3.48
Shox2-204ENSMUST00000162439 WrnO09053 1401 aa36.75■■■■□ 3.47
Shox2-204ENSMUST00000162439 Arid3cA6PWV5 409 aa36.74■■■■□ 3.47
Shox2-204ENSMUST00000162439 Igf1rQ60751 1373 aa36.68■■■■□ 3.46
Shox2-204ENSMUST00000162439 Ttc37F8VPK0 1563 aa36.68■■■■□ 3.46
Shox2-204ENSMUST00000162439 Polr1aO35134 1717 aaKnown RBP36.68■■■■□ 3.46
Shox2-204ENSMUST00000162439 Gab3Q8BSM5 595 aa36.67■■■■□ 3.46
Shox2-204ENSMUST00000162439 Lrrc9Q8CDN9 1456 aa36.63■■■■□ 3.45
Shox2-204ENSMUST00000162439 AdgbG3UZ78 1657 aa36.61■■■■□ 3.45
Shox2-204ENSMUST00000162439 Mapkbp1Q6NS57 1503 aa36.6■■■■□ 3.45
Shox2-204ENSMUST00000162439 Kdm5bQ80Y84 1544 aa36.6■■■■□ 3.45
Shox2-204ENSMUST00000162439 Rrbp1Q99PL5 1605 aaKnown RBP36.59■■■■□ 3.45
Shox2-204ENSMUST00000162439 Cux1P53564 1515 aa36.58■■■■□ 3.45
Shox2-204ENSMUST00000162439 Znf608Q56A10 1511 aa36.58■■■■□ 3.45
Shox2-204ENSMUST00000162439 Depdc5P61460 1591 aa36.56■■■■□ 3.44
Shox2-204ENSMUST00000162439 Clip1Q922J3 1391 aa36.53■■■■□ 3.44
Shox2-204ENSMUST00000162439 Plekhg3Q4VAC9 1341 aa36.52■■■■□ 3.44
Shox2-204ENSMUST00000162439 Zfyve16Q80U44 1528 aa36.45■■■■□ 3.43
Shox2-204ENSMUST00000162439 Wdr7Q920I9 1489 aa36.43■■■■□ 3.42
Shox2-204ENSMUST00000162439 Arhgap31A6X8Z5 1425 aa36.4■■■■□ 3.42
Shox2-204ENSMUST00000162439 Cep162Q6ZQ06 1403 aa36.39■■■■□ 3.42
Shox2-204ENSMUST00000162439 Fyco1Q8VDC1 1437 aa36.39■■■■□ 3.42
Shox2-204ENSMUST00000162439 Arhgef11Q68FM7 1552 aa36.36■■■■□ 3.41
Shox2-204ENSMUST00000162439 NhsB1AV60 1647 aa36.35■■■■□ 3.41
Shox2-204ENSMUST00000162439 Cul7Q8VE73 1689 aa36.34■■■■□ 3.41
Shox2-204ENSMUST00000162439 Fndc1E9Q043 1732 aa36.33■■■■□ 3.41
Shox2-204ENSMUST00000162439 Myt1lP97500 1187 aa36.32■■■■□ 3.4
Shox2-204ENSMUST00000162439 Atp10dQ8K2X1 1416 aa36.26■■■■□ 3.4
Shox2-204ENSMUST00000162439 Ccdc141E9Q8Q6 1531 aa36.26■■■■□ 3.4
Shox2-204ENSMUST00000162439 Plppr3Q7TPB0 716 aa36.26■■■■□ 3.4
Shox2-204ENSMUST00000162439 Dnajc5gQ8C632 165 aa36.26■■■■□ 3.4
Shox2-204ENSMUST00000162439 Alpk3Q924C5 1678 aa36.24■■■■□ 3.39
Shox2-204ENSMUST00000162439 HrcG5E8J6 738 aa36.21■■■■□ 3.39
Shox2-204ENSMUST00000162439 AglF8VPN4 1532 aa36.14■■■■□ 3.38
Shox2-204ENSMUST00000162439 Mroh2aD3Z750 1679 aa36.14■■■■□ 3.38
Shox2-204ENSMUST00000162439 Gcc2Q8CHG3 1679 aa36.1■■■■□ 3.37
Shox2-204ENSMUST00000162439 Aebp1Q640N1 1128 aa36.08■■■■□ 3.37
Shox2-204ENSMUST00000162439 Ankrd26Q811D2 1581 aa36.07■■■■□ 3.37
Shox2-204ENSMUST00000162439 Rapgef6Q5NCJ1 1609 aa36.01■■■■□ 3.35
Shox2-204ENSMUST00000162439 Fancd2Q80V62 1450 aa36■■■■□ 3.35
Shox2-204ENSMUST00000162439 BlmO88700 1416 aa35.99■■■■□ 3.35
Shox2-204ENSMUST00000162439 Ncoa2Q61026 1462 aa35.99■■■■□ 3.35
Shox2-204ENSMUST00000162439 Kiaa1210E9Q0C6 1637 aa35.98■■■■□ 3.35
Shox2-204ENSMUST00000162439 Abca8bQ8K440 1620 aa35.97■■■■□ 3.35
Shox2-204ENSMUST00000162439 Kif27Q7M6Z4 1394 aa35.95■■■■□ 3.35
Shox2-204ENSMUST00000162439 A2mQ6GQT1 1474 aa35.9■■■■□ 3.34
Shox2-204ENSMUST00000162439 MlecQ6ZQI3 291 aaKnown RBP35.87■■■■□ 3.33
Shox2-204ENSMUST00000162439 Rnf17Q99MV7 1640 aa35.86■■■■□ 3.33
Shox2-204ENSMUST00000162439 Arap1Q4LDD4 1452 aa35.86■■■■□ 3.33
Shox2-204ENSMUST00000162439 Magi1Q6RHR9 1471 aa35.86■■■■□ 3.33
Shox2-204ENSMUST00000162439 Prex2Q3LAC4 1598 aa35.77■■■■□ 3.32
Shox2-204ENSMUST00000162439 Setd5Q5XJV7 1441 aa35.76■■■■□ 3.32
Shox2-204ENSMUST00000162439 Ncoa3O09000 1398 aa35.72■■■■□ 3.31
Shox2-204ENSMUST00000162439 Fam163aQ8CAA5 168 aa35.71■■■■□ 3.31
Shox2-204ENSMUST00000162439 Ap3b1Q9Z1T1 1105 aa35.71■■■■□ 3.31
Shox2-204ENSMUST00000162439 Mlh3A0A1Y7VMP7 1443 aa35.7■■■■□ 3.31
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms