RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Fam135aQ6NS59 1506 aa19.47■□□□□ 0.71
Usf1-208ENSMUST00000161241 Frmpd1A2AKB4 1549 aa19.46■□□□□ 0.71
Usf1-208ENSMUST00000161241 Erich3F6QRE9 1637 aa19.46■□□□□ 0.71
Usf1-208ENSMUST00000161241 Camsap1A2AHC3 1581 aa19.41■□□□□ 0.7
Usf1-208ENSMUST00000161241 Gm38655A0A286YDK6 273 aa19.39■□□□□ 0.69
Usf1-208ENSMUST00000161241 Eid3Q3V124 375 aa19.39■□□□□ 0.69
Usf1-208ENSMUST00000161241 Naip1Q9QWK5 1403 aa19.36■□□□□ 0.69
Usf1-208ENSMUST00000161241 Hnrnpul2Q00PI9 745 aaKnown RBP19.36■□□□□ 0.69
Usf1-208ENSMUST00000161241 Phldb1Q6PDH0 1371 aaKnown RBP19.35■□□□□ 0.69
Usf1-208ENSMUST00000161241 Ankrd26Q811D2 1581 aa19.33■□□□□ 0.68
Usf1-208ENSMUST00000161241 Ap3b1Q9Z1T1 1105 aa19.33■□□□□ 0.68
Usf1-208ENSMUST00000161241 AqrQ8CFQ3 1481 aaKnown RBP19.32■□□□□ 0.68
Usf1-208ENSMUST00000161241 Stra8P70278 393 aa19.32■□□□□ 0.68
Usf1-208ENSMUST00000161241 Mroh2bQ7M6Y6 1581 aa19.31■□□□□ 0.68
Usf1-208ENSMUST00000161241 UacaQ8CGB3 1411 aa19.31■□□□□ 0.68
Usf1-208ENSMUST00000161241 Rpap1Q80TE0 1409 aa19.31■□□□□ 0.68
Usf1-208ENSMUST00000161241 BlmO88700 1416 aa19.28■□□□□ 0.68
Usf1-208ENSMUST00000161241 Pcf11G3X9Z4 1553 aa19.27■□□□□ 0.67
Usf1-208ENSMUST00000161241 Grin2bQ01097 1482 aa19.26■□□□□ 0.67
Usf1-208ENSMUST00000161241 Kif15Q6P9L6 1387 aa19.26■□□□□ 0.67
Usf1-208ENSMUST00000161241 Slx4Q6P1D7 1565 aa19.26■□□□□ 0.67
Usf1-208ENSMUST00000161241 Ankrd36D3Z4K0 1415 aa19.25■□□□□ 0.67
Usf1-208ENSMUST00000161241 Lmo7E9PYF4 1699 aaKnown RBP19.24■□□□□ 0.67
Usf1-208ENSMUST00000161241 Unc13aQ4KUS2 1712 aa19.23■□□□□ 0.67
Usf1-208ENSMUST00000161241 Ccer2J3QPU5 274 aa19.22■□□□□ 0.67
Usf1-208ENSMUST00000161241 Ubl4bQ9CQ84 188 aa19.22■□□□□ 0.67
Usf1-208ENSMUST00000161241 Znf710Q3U288 666 aa19.21■□□□□ 0.67
Usf1-208ENSMUST00000161241 Fhad1A6PWD2 1420 aa19.2■□□□□ 0.66
Usf1-208ENSMUST00000161241 Fam71e1A1L3C1 212 aa19.19■□□□□ 0.66
Usf1-208ENSMUST00000161241 SafbD3YXK2 937 aaKnown RBP19.19■□□□□ 0.66
Usf1-208ENSMUST00000161241 Peg3Q3URU2 1571 aa19.19■□□□□ 0.66
Usf1-208ENSMUST00000161241 CntlnA2AM05 1397 aa19.19■□□□□ 0.66
Usf1-208ENSMUST00000161241 Il27Q8K3I6 234 aa19.18■□□□□ 0.66
Usf1-208ENSMUST00000161241 NclP09405 707 aaKnown RBP19.17■□□□□ 0.66
Usf1-208ENSMUST00000161241 Mia2Q91ZV0 1396 aa19.17■□□□□ 0.66
Usf1-208ENSMUST00000161241 Camsap2Q8C1B1 1461 aa19.17■□□□□ 0.66
Usf1-208ENSMUST00000161241 Gm13697A2AK42 830 aa19.17■□□□□ 0.66
Usf1-208ENSMUST00000161241 Senp3Q9EP97 568 aaKnown RBP19.17■□□□□ 0.66
Usf1-208ENSMUST00000161241 Vps8Q0P5W1 1427 aa19.13■□□□□ 0.65
Usf1-208ENSMUST00000161241 3425401B19RikD3Z1D3 1412 aa19.12■□□□□ 0.65
Usf1-208ENSMUST00000161241 Fyco1Q8VDC1 1437 aa19.12■□□□□ 0.65
Usf1-208ENSMUST00000161241 Anp32aO35381 247 aa19.11■□□□□ 0.65
Usf1-208ENSMUST00000161241 Fam50aQ9WV03 339 aaKnown RBP19.1■□□□□ 0.65
Usf1-208ENSMUST00000161241 Crocc2F6XLV1 1638 aa19.09■□□□□ 0.65
Usf1-208ENSMUST00000161241 Carmil1Q6EDY6 1374 aa19.08■□□□□ 0.65
Usf1-208ENSMUST00000161241 Dhx29Q6PGC1 1365 aaKnown RBP19.08■□□□□ 0.64
Usf1-208ENSMUST00000161241 Efcab5A0JP43 1406 aa19.07■□□□□ 0.64
Usf1-208ENSMUST00000161241 Cux1P53564 1515 aa19.05■□□□□ 0.64
Usf1-208ENSMUST00000161241 Mrc2Q64449 1479 aa19.04■□□□□ 0.64
Usf1-208ENSMUST00000161241 Urb2E9Q7L1 1524 aaKnown RBP19.02■□□□□ 0.64
Usf1-208ENSMUST00000161241 Naip2Q9QUK4 1447 aa19.02■□□□□ 0.64
Usf1-208ENSMUST00000161241 Hspa5P20029 655 aaKnown RBP19.01■□□□□ 0.63
Usf1-208ENSMUST00000161241 Ncoa2Q61026 1462 aa19■□□□□ 0.63
Usf1-208ENSMUST00000161241 Cul7Q8VE73 1689 aa18.99■□□□□ 0.63
Usf1-208ENSMUST00000161241 Smg6P61406 1418 aaKnown RBP18.97■□□□□ 0.63
Usf1-208ENSMUST00000161241 Calr4Q3TQS0 420 aa18.96■□□□□ 0.63
Usf1-208ENSMUST00000161241 Rtl5Q5DTT4 599 aa18.96■□□□□ 0.63
Usf1-208ENSMUST00000161241 Lmod2Q3UHZ5 550 aa18.95■□□□□ 0.62
Usf1-208ENSMUST00000161241 Fhod3Q76LL6 1578 aa18.95■□□□□ 0.62
Usf1-208ENSMUST00000161241 Gm7298A0A0N4SVU1 1476 aa18.95■□□□□ 0.62
Usf1-208ENSMUST00000161241 Naip5Q9R016 1403 aa18.94■□□□□ 0.62
Usf1-208ENSMUST00000161241 Gm1043A0A140LJC2 1431 aa18.93■□□□□ 0.62
Usf1-208ENSMUST00000161241 Polr1aO35134 1717 aaKnown RBP18.93■□□□□ 0.62
Usf1-208ENSMUST00000161241 A2mQ6GQT1 1474 aa18.88■□□□□ 0.61
Usf1-208ENSMUST00000161241 Aebp1Q640N1 1128 aa18.86■□□□□ 0.61
Usf1-208ENSMUST00000161241 Pprc1Q6NZN1 1644 aa18.86■□□□□ 0.61
Usf1-208ENSMUST00000161241 SynmQ70IV5 1561 aa18.85■□□□□ 0.61
Usf1-208ENSMUST00000161241 PogzQ8BZH4 1409 aaKnown RBP18.85■□□□□ 0.61
Usf1-208ENSMUST00000161241 Dennd4bQ3U1Y4 1499 aa18.85■□□□□ 0.61
Usf1-208ENSMUST00000161241 Cux2P70298 1426 aa18.84■□□□□ 0.61
Usf1-208ENSMUST00000161241 Duox2A2AQ99 1517 aa18.83■□□□□ 0.61
Usf1-208ENSMUST00000161241 LrpprcQ6PB66 1392 aaKnown RBP18.83■□□□□ 0.6
Usf1-208ENSMUST00000161241 Washc2Q6PGL7 1334 aa18.81■□□□□ 0.6
Usf1-208ENSMUST00000161241 Nolc1E9Q5C9 702 aaKnown RBP18.81■□□□□ 0.6
Usf1-208ENSMUST00000161241 Lmtk2Q3TYD6 1471 aa18.81■□□□□ 0.6
Usf1-208ENSMUST00000161241 DiexfQ8BTT6 772 aaKnown RBP18.81■□□□□ 0.6
Usf1-208ENSMUST00000161241 Kif21aQ9QXL2 1672 aa18.79■□□□□ 0.6
Usf1-208ENSMUST00000161241 Pelp1Q9DBD5 1123 aaKnown RBP18.79■□□□□ 0.6
Usf1-208ENSMUST00000161241 Npm1Q61937 292 aaKnown RBP18.78■□□□□ 0.6
Usf1-208ENSMUST00000161241 Sin3aQ60520 1274 aaKnown RBP18.77■□□□□ 0.6
Usf1-208ENSMUST00000161241 Setbp1Q9Z180 1582 aa18.77■□□□□ 0.6
Usf1-208ENSMUST00000161241 Bcl11aQ9QYE3 773 aa18.76■□□□□ 0.59
Usf1-208ENSMUST00000161241 Ccnb3Q810T2 1396 aa18.74■□□□□ 0.59
Usf1-208ENSMUST00000161241 Gcc2Q8CHG3 1679 aa18.74■□□□□ 0.59
Usf1-208ENSMUST00000161241 Samd9lQ69Z37 1561 aa18.73■□□□□ 0.59
Usf1-208ENSMUST00000161241 Rfx7F8VPJ6 1459 aa18.71■□□□□ 0.59
Usf1-208ENSMUST00000161241 Supt16hQ920B9 1047 aa18.7■□□□□ 0.58
Usf1-208ENSMUST00000161241 Ncoa1P70365 1447 aa18.7■□□□□ 0.58
Usf1-208ENSMUST00000161241 Ube2uB1AUC4 352 aa18.69■□□□□ 0.58
Usf1-208ENSMUST00000161241 Lrriq1Q0P5X1 1673 aa18.66■□□□□ 0.58
Usf1-208ENSMUST00000161241 Mphosph9A6H5Y1 991 aa18.66■□□□□ 0.58
Usf1-208ENSMUST00000161241 Wdr43Q6ZQL4 677 aaKnown RBP18.66■□□□□ 0.58
Usf1-208ENSMUST00000161241 Gm13695A2AK44 830 aa18.65■□□□□ 0.58
Usf1-208ENSMUST00000161241 Abca5Q8K448 1642 aa18.65■□□□□ 0.58
Usf1-208ENSMUST00000161241 Slc24a1Q91WD8 1130 aa18.65■□□□□ 0.58
Usf1-208ENSMUST00000161241 Chic2Q9D9G3 165 aa18.64■□□□□ 0.57
Usf1-208ENSMUST00000161241 Gpatch8A2A6A1 1505 aa18.61■□□□□ 0.57
Usf1-208ENSMUST00000161241 EprsQ8CGC7 1512 aaKnown RBP18.61■□□□□ 0.57
Usf1-208ENSMUST00000161241 Mug1P28665 1476 aa18.61■□□□□ 0.57
Usf1-208ENSMUST00000161241 Rprd2Q6NXI6 1469 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms