RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Abcc9P70170 1546 aa11.13□□□□□ -0.63
Clk4-203ENSMUST00000109113 Krtap28-13A0A087WQP5 138 aa11.09□□□□□ -0.63
Clk4-203ENSMUST00000109113 CrebzfQ91ZR3 358 aa11.09□□□□□ -0.63
Clk4-203ENSMUST00000109113 EdaraddQ8VHX2 208 aa11.08□□□□□ -0.64
Clk4-203ENSMUST00000109113 ZxdbA2CE44 873 aa11.06□□□□□ -0.64
Clk4-203ENSMUST00000109113 Sra1Q80VJ2 232 aa11.06□□□□□ -0.64
Clk4-203ENSMUST00000109113 Fam71e1A1L3C1 212 aa11.03□□□□□ -0.64
Clk4-203ENSMUST00000109113 Hnrnpul2Q00PI9 745 aaKnown RBP11.02□□□□□ -0.64
Clk4-203ENSMUST00000109113 Prm3Q62100 101 aa10.98□□□□□ -0.65
Clk4-203ENSMUST00000109113 Styxl1Q9DAR2 321 aa10.98□□□□□ -0.65
Clk4-203ENSMUST00000109113 AcrbpQ3V140 540 aa10.97□□□□□ -0.65
Clk4-203ENSMUST00000109113 Ppp1r37Q8BKR5 712 aa10.95□□□□□ -0.66
Clk4-203ENSMUST00000109113 Gm45233A0A0N4SVE0 221 aa10.94□□□□□ -0.66
Clk4-203ENSMUST00000109113 Abcc8B2RUS7 1588 aa10.94□□□□□ -0.66
Clk4-203ENSMUST00000109113 Znf516Q7TSH3 1157 aa10.94□□□□□ -0.66
Clk4-203ENSMUST00000109113 Pde4cQ3UEI1 686 aa10.91□□□□□ -0.66
Clk4-203ENSMUST00000109113 A030005K14RikA0A1Y7VNY1 122 aa10.91□□□□□ -0.66
Clk4-203ENSMUST00000109113 Krtap4-2B1AQ85 167 aa10.89□□□□□ -0.67
Clk4-203ENSMUST00000109113 Fam181bQ80VF6 417 aa10.87□□□□□ -0.67
Clk4-203ENSMUST00000109113 Rnf166Q3U9F6 237 aa10.86□□□□□ -0.67
Clk4-203ENSMUST00000109113 ScribQ80U72 1612 aa10.85□□□□□ -0.67
Clk4-203ENSMUST00000109113 Thap8E9Q695 213 aa10.84□□□□□ -0.67
Clk4-203ENSMUST00000109113 PygbQ8CI94 843 aaKnown RBP10.84□□□□□ -0.67
Clk4-203ENSMUST00000109113 ElnP54320 860 aa10.81□□□□□ -0.68
Clk4-203ENSMUST00000109113 Gm36176A0A1W2P8D5 158 aa10.79□□□□□ -0.68
Clk4-203ENSMUST00000109113 Ano8Q6PB70 1060 aa10.79□□□□□ -0.68
Clk4-203ENSMUST00000109113 Suz12Q80U70 741 aaKnown RBP10.78□□□□□ -0.68
Clk4-203ENSMUST00000109113 Sall2Q9QX96 1004 aa10.78□□□□□ -0.68
Clk4-203ENSMUST00000109113 Axin1O35625 863 aa10.74□□□□□ -0.69
Clk4-203ENSMUST00000109113 Kank4Q6P9J5 1016 aa10.66□□□□□ -0.7
Clk4-203ENSMUST00000109113 Lce1mQ9CR91 182 aa10.66□□□□□ -0.7
Clk4-203ENSMUST00000109113 Myt1lP97500 1187 aa10.65□□□□□ -0.7
Clk4-203ENSMUST00000109113 Ndufv2Q9D6J6 248 aa10.65□□□□□ -0.7
Clk4-203ENSMUST00000109113 Zbtb7bQ64321 544 aa10.62□□□□□ -0.71
Clk4-203ENSMUST00000109113 Prim1P20664 417 aa10.59□□□□□ -0.71
Clk4-203ENSMUST00000109113 Atad2Q8CDM1 1040 aa10.58□□□□□ -0.72
Clk4-203ENSMUST00000109113 Tcf3P15806 651 aa10.55□□□□□ -0.72
Clk4-203ENSMUST00000109113 Irx5Q9JKQ4 484 aa10.55□□□□□ -0.72
Clk4-203ENSMUST00000109113 Dkk1O54908 272 aa10.54□□□□□ -0.72
Clk4-203ENSMUST00000109113 Pak3Q61036 559 aa10.53□□□□□ -0.72
Clk4-203ENSMUST00000109113 Rtn4Q99P72 1162 aaKnown RBP10.52□□□□□ -0.73
Clk4-203ENSMUST00000109113 Pde4dQ01063 747 aa10.51□□□□□ -0.73
Clk4-203ENSMUST00000109113 RragcQ99K70 398 aa10.51□□□□□ -0.73
Clk4-203ENSMUST00000109113 Adnp2Q8CHC8 1165 aaKnown RBP10.51□□□□□ -0.73
Clk4-203ENSMUST00000109113 C1qbpO35658 278 aa10.49□□□□□ -0.73
Clk4-203ENSMUST00000109113 Msh5Q9QUM7 833 aa10.49□□□□□ -0.73
Clk4-203ENSMUST00000109113 Znf579Q80VM4 562 aa10.48□□□□□ -0.73
Clk4-203ENSMUST00000109113 Jph4Q80WT0 628 aa10.47□□□□□ -0.73
Clk4-203ENSMUST00000109113 Bclaf1Q8K019 919 aaKnown RBP10.47□□□□□ -0.73
Clk4-203ENSMUST00000109113 Tulp1Q9Z273 543 aa10.47□□□□□ -0.73
Clk4-203ENSMUST00000109113 Pdap1Q3UHX2 181 aaKnown RBP10.47□□□□□ -0.73
Clk4-203ENSMUST00000109113 Repin1Q5U4E2 545 aa10.44□□□□□ -0.74
Clk4-203ENSMUST00000109113 Tshz2Q68FE9 1030 aa10.44□□□□□ -0.74
Clk4-203ENSMUST00000109113 Ier5lQ99J55 406 aa10.44□□□□□ -0.74
Clk4-203ENSMUST00000109113 Smpd1Q04519 627 aa10.44□□□□□ -0.74
Clk4-203ENSMUST00000109113 Arhgef1Q61210 920 aaKnown RBP10.44□□□□□ -0.74
Clk4-203ENSMUST00000109113 NacadQ5SWP3 1504 aa10.4□□□□□ -0.74
Clk4-203ENSMUST00000109113 Hdac5Q9Z2V6 1113 aa10.37□□□□□ -0.75
Clk4-203ENSMUST00000109113 PsdQ5DTT2 1024 aa10.36□□□□□ -0.75
Clk4-203ENSMUST00000109113 Hyal3Q8VEI3 412 aa10.36□□□□□ -0.75
Clk4-203ENSMUST00000109113 Kdm5dQ62240 1548 aa10.36□□□□□ -0.75
Clk4-203ENSMUST00000109113 Fndc3aQ8BX90 1198 aa10.35□□□□□ -0.75
Clk4-203ENSMUST00000109113 2310050C09RikG5E8Z3 280 aa10.33□□□□□ -0.76
Clk4-203ENSMUST00000109113 MycnP03966 462 aaKnown RBP10.33□□□□□ -0.76
Clk4-203ENSMUST00000109113 Setdb2Q8C267 713 aa10.32□□□□□ -0.76
Clk4-203ENSMUST00000109113 Gm13697A2AK42 830 aa10.31□□□□□ -0.76
Clk4-203ENSMUST00000109113 Fam117bQ3U3E2 584 aa10.3□□□□□ -0.76
Clk4-203ENSMUST00000109113 Gga1Q8R0H9 635 aa10.25□□□□□ -0.77
Clk4-203ENSMUST00000109113 Sycp2Q9CUU3 1500 aa10.22□□□□□ -0.77
Clk4-203ENSMUST00000109113 Cdca7lQ922M5 438 aa10.2□□□□□ -0.78
Clk4-203ENSMUST00000109113 Cacna1iE9Q7P2 2199 aa10.17□□□□□ -0.78
Clk4-203ENSMUST00000109113 BicraF8VPZ9 1578 aa10.16□□□□□ -0.78
Clk4-203ENSMUST00000109113 Scnn1bQ9WU38 638 aa10.15□□□□□ -0.78
Clk4-203ENSMUST00000109113 A030005L19RikA0A1Y7VIU2 113 aa10.15□□□□□ -0.79
Clk4-203ENSMUST00000109113 Evi5P97366 809 aa10.15□□□□□ -0.79
Clk4-203ENSMUST00000109113 Fbxo31Q3TQF0 507 aa10.14□□□□□ -0.79
Clk4-203ENSMUST00000109113 Pcdhb17Q91VD8 799 aa10.12□□□□□ -0.79
Clk4-203ENSMUST00000109113 Thoc2B1AZI6 1594 aaKnown RBP10.11□□□□□ -0.79
Clk4-203ENSMUST00000109113 Actn4P57780 912 aaKnown RBP10.08□□□□□ -0.8
Clk4-203ENSMUST00000109113 Saxo1B1AXP3 476 aa10.05□□□□□ -0.8
Clk4-203ENSMUST00000109113 Dcaf1Q80TR8 1506 aa10.04□□□□□ -0.8
Clk4-203ENSMUST00000109113 Gm11939A2A592 99 aa10.04□□□□□ -0.8
Clk4-203ENSMUST00000109113 E9Q0B3 247 aa10.03□□□□□ -0.8
Clk4-203ENSMUST00000109113 Hoxa2P31245 372 aa10.03□□□□□ -0.8
Clk4-203ENSMUST00000109113 Chrm1P12657 460 aa10.02□□□□□ -0.81
Clk4-203ENSMUST00000109113 Dnm1lQ8K1M6 742 aa10□□□□□ -0.81
Clk4-203ENSMUST00000109113 Gabbr2Q80T41 940 aa9.99□□□□□ -0.81
Clk4-203ENSMUST00000109113 Fmr1nbQ80ZA7 238 aa9.99□□□□□ -0.81
Clk4-203ENSMUST00000109113 A0A1Y7VJ07 166 aa9.96□□□□□ -0.81
Clk4-203ENSMUST00000109113 Fkbp4P30416 458 aa9.95□□□□□ -0.82
Clk4-203ENSMUST00000109113 Pds5bQ4VA53 1446 aaKnown RBP9.95□□□□□ -0.82
Clk4-203ENSMUST00000109113 Gm7544A0A1Y7VJ58 118 aa9.93□□□□□ -0.82
Clk4-203ENSMUST00000109113 Apba1B2RUJ5 842 aa9.92□□□□□ -0.82
Clk4-203ENSMUST00000109113 Myt1Q8CFC2 1127 aa9.92□□□□□ -0.82
Clk4-203ENSMUST00000109113 Pbx2O35984 430 aa9.9□□□□□ -0.82
Clk4-203ENSMUST00000109113 Krtap3-2Q9D638 99 aa9.9□□□□□ -0.82
Clk4-203ENSMUST00000109113 Krtap3-3Q9D7P0 99 aa9.9□□□□□ -0.82
Clk4-203ENSMUST00000109113 Ankrd65F6YK91 380 aa9.89□□□□□ -0.83
Clk4-203ENSMUST00000109113 Ufsp1Q9CZP0 217 aa9.89□□□□□ -0.83
Clk4-203ENSMUST00000109113 Dnajc5P60904 198 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms