RNA–Protein interactions for RNA: ENSMUST00000108677.1

Usp43-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp43, Length 4,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-202ENSMUST00000108677 Rad21Q61550 635 aaKnown RBP21.64■■□□□ 1.06
Usp43-202ENSMUST00000108677 Nlrp6Q91WS2 869 aa21.62■■□□□ 1.05
Usp43-202ENSMUST00000108677 Hspa5P20029 655 aaKnown RBP21.62■■□□□ 1.05
Usp43-202ENSMUST00000108677 Gm13697A2AK42 830 aa21.61■■□□□ 1.05
Usp43-202ENSMUST00000108677 Polr3glQ8R0C0 218 aa21.61■■□□□ 1.05
Usp43-202ENSMUST00000108677 CftrP26361 1476 aa21.61■■□□□ 1.05
Usp43-202ENSMUST00000108677 P3h3Q8CG70 732 aa21.6■■□□□ 1.05
Usp43-202ENSMUST00000108677 Ccdc18Q640L5 1455 aa21.59■■□□□ 1.05
Usp43-202ENSMUST00000108677 Grwd1Q810D6 446 aaKnown RBP21.56■■□□□ 1.04
Usp43-202ENSMUST00000108677 Arhgap27A2AB59 869 aa21.53■■□□□ 1.04
Usp43-202ENSMUST00000108677 Smarca2Q6DIC0 1577 aa21.53■■□□□ 1.04
Usp43-202ENSMUST00000108677 Fmn1Q05860 1466 aa21.52■■□□□ 1.04
Usp43-202ENSMUST00000108677 Ercc6F8VPZ5 1481 aa21.51■■□□□ 1.03
Usp43-202ENSMUST00000108677 ArxO35085 564 aa21.5■■□□□ 1.03
Usp43-202ENSMUST00000108677 Rangap1P46061 589 aaKnown RBP21.5■■□□□ 1.03
Usp43-202ENSMUST00000108677 Plppr3Q7TPB0 716 aa21.49■■□□□ 1.03
Usp43-202ENSMUST00000108677 SafbD3YXK2 937 aaKnown RBP21.48■■□□□ 1.03
Usp43-202ENSMUST00000108677 Crybg2B7ZCC2 1516 aa21.48■■□□□ 1.03
Usp43-202ENSMUST00000108677 Rtl5Q5DTT4 599 aa21.45■■□□□ 1.03
Usp43-202ENSMUST00000108677 Synj1Q8CHC4 1574 aa21.45■■□□□ 1.02
Usp43-202ENSMUST00000108677 DaxxO35613 739 aa21.44■■□□□ 1.02
Usp43-202ENSMUST00000108677 Wdr43Q6ZQL4 677 aaKnown RBP21.44■■□□□ 1.02
Usp43-202ENSMUST00000108677 Rapgef2Q8CHG7 1496 aa21.43■■□□□ 1.02
Usp43-202ENSMUST00000108677 Sin3aQ60520 1274 aaKnown RBP21.43■■□□□ 1.02
Usp43-202ENSMUST00000108677 Aebp1Q640N1 1128 aa21.37■■□□□ 1.01
Usp43-202ENSMUST00000108677 Fam71e1A1L3C1 212 aa21.36■■□□□ 1.01
Usp43-202ENSMUST00000108677 Pds5bQ4VA53 1446 aaKnown RBP21.35■■□□□ 1.01
Usp43-202ENSMUST00000108677 Kdm2aP59997 1161 aa21.35■■□□□ 1.01
Usp43-202ENSMUST00000108677 Wwc2Q6NXJ0 1187 aa21.34■■□□□ 1.01
Usp43-202ENSMUST00000108677 Clstn2Q9ER65 966 aa21.34■■□□□ 1.01
Usp43-202ENSMUST00000108677 Gm13695A2AK44 830 aa21.32■■□□□ 1
Usp43-202ENSMUST00000108677 Ofd1Q80Z25 1017 aa21.3■■□□□ 1
Usp43-202ENSMUST00000108677 Card11Q8CIS0 1159 aa21.29■■□□□ 1
Usp43-202ENSMUST00000108677 Rrp7aQ9D1C9 280 aaKnown RBP21.28■■□□□ 1
Usp43-202ENSMUST00000108677 Cabp1Q9JLK7 227 aa21.24■□□□□ 0.99
Usp43-202ENSMUST00000108677 Mia2Q91ZV0 1396 aa21.24■□□□□ 0.99
Usp43-202ENSMUST00000108677 Mtus2Q3UHD3 1353 aa21.23■□□□□ 0.99
Usp43-202ENSMUST00000108677 Hdac5Q9Z2V6 1113 aa21.23■□□□□ 0.99
Usp43-202ENSMUST00000108677 Pkd2O35245 966 aa21.22■□□□□ 0.99
Usp43-202ENSMUST00000108677 Kif27Q7M6Z4 1394 aa21.22■□□□□ 0.99
Usp43-202ENSMUST00000108677 Mroh3A0A1D5RM54 893 aa21.2■□□□□ 0.98
Usp43-202ENSMUST00000108677 Trim26Q99PN3 545 aa21.2■□□□□ 0.98
Usp43-202ENSMUST00000108677 Baz1bQ9Z277 1479 aa21.19■□□□□ 0.98
Usp43-202ENSMUST00000108677 Cux2P70298 1426 aa21.19■□□□□ 0.98
Usp43-202ENSMUST00000108677 Apbb1Q9QXJ1 710 aa21.15■□□□□ 0.98
Usp43-202ENSMUST00000108677 Upf2A2AT37 1269 aaKnown RBP21.13■□□□□ 0.97
Usp43-202ENSMUST00000108677 Slc4a3P16283 1227 aa21.11■□□□□ 0.97
Usp43-202ENSMUST00000108677 Mphosph9A6H5Y1 991 aa21.11■□□□□ 0.97
Usp43-202ENSMUST00000108677 Trak1Q6PD31 939 aa21.11■□□□□ 0.97
Usp43-202ENSMUST00000108677 DiexfQ8BTT6 772 aaKnown RBP21.1■□□□□ 0.97
Usp43-202ENSMUST00000108677 Rpap1Q80TE0 1409 aa21.09■□□□□ 0.97
Usp43-202ENSMUST00000108677 Cwc22Q8C5N3 908 aaKnown RBP21.08■□□□□ 0.96
Usp43-202ENSMUST00000108677 Neurod2Q62414 383 aa21.07■□□□□ 0.96
Usp43-202ENSMUST00000108677 Atad2bE9Q166 1460 aaKnown RBP21.06■□□□□ 0.96
Usp43-202ENSMUST00000108677 Fyco1Q8VDC1 1437 aa21.06■□□□□ 0.96
Usp43-202ENSMUST00000108677 Map4P27546 1125 aaKnown RBP21.06■□□□□ 0.96
Usp43-202ENSMUST00000108677 Rundc1Q0VDN7 615 aa21.06■□□□□ 0.96
Usp43-202ENSMUST00000108677 Exoc6Q8R313 802 aa21.06■□□□□ 0.96
Usp43-202ENSMUST00000108677 Stk24Q99KH8 431 aa21.05■□□□□ 0.96
Usp43-202ENSMUST00000108677 CntlnA2AM05 1397 aa21.04■□□□□ 0.96
Usp43-202ENSMUST00000108677 Smarca4Q3TKT4 1613 aaKnown RBP21.04■□□□□ 0.96
Usp43-202ENSMUST00000108677 Gm20521D3Z5F7 333 aa21.03■□□□□ 0.96
Usp43-202ENSMUST00000108677 Srpk2O54781 681 aaKnown RBP20.98■□□□□ 0.95
Usp43-202ENSMUST00000108677 Arhgap35Q91YM2 1499 aa20.97■□□□□ 0.95
Usp43-202ENSMUST00000108677 Cnga1P29974 684 aa20.97■□□□□ 0.95
Usp43-202ENSMUST00000108677 Carmil1Q6EDY6 1374 aa20.96■□□□□ 0.95
Usp43-202ENSMUST00000108677 Trim30dE9PWL0 497 aa20.94■□□□□ 0.94
Usp43-202ENSMUST00000108677 Cttnbp2B9EJA2 1648 aa20.94■□□□□ 0.94
Usp43-202ENSMUST00000108677 Arid3cA6PWV5 409 aa20.93■□□□□ 0.94
Usp43-202ENSMUST00000108677 Dbr1Q923B1 550 aa20.93■□□□□ 0.94
Usp43-202ENSMUST00000108677 Phldb1Q6PDH0 1371 aaKnown RBP20.93■□□□□ 0.94
Usp43-202ENSMUST00000108677 LrpprcQ6PB66 1392 aaKnown RBP20.92■□□□□ 0.94
Usp43-202ENSMUST00000108677 Ccnb3Q810T2 1396 aa20.92■□□□□ 0.94
Usp43-202ENSMUST00000108677 CanxP35564 591 aaKnown RBP20.92■□□□□ 0.94
Usp43-202ENSMUST00000108677 Ecm2Q5FW85 670 aa20.91■□□□□ 0.94
Usp43-202ENSMUST00000108677 Ifit1bl1D3Z6F0 470 aa20.9■□□□□ 0.94
Usp43-202ENSMUST00000108677 AknaQ80VW7 1404 aa20.89■□□□□ 0.93
Usp43-202ENSMUST00000108677 B4galnt3Q6L8S8 986 aa20.87■□□□□ 0.93
Usp43-202ENSMUST00000108677 Exosc9Q9JHI7 438 aaKnown RBP20.85■□□□□ 0.93
Usp43-202ENSMUST00000108677 Dhx29Q6PGC1 1365 aaKnown RBP20.82■□□□□ 0.92
Usp43-202ENSMUST00000108677 Iqgap2Q3UQ44 1575 aa20.82■□□□□ 0.92
Usp43-202ENSMUST00000108677 IqubQ8CDK3 788 aa20.81■□□□□ 0.92
Usp43-202ENSMUST00000108677 Safb2Q80YR5 991 aaKnown RBP20.8■□□□□ 0.92
Usp43-202ENSMUST00000108677 Armcx1Q9CX83 456 aa20.8■□□□□ 0.92
Usp43-202ENSMUST00000108677 Arid4bA2CG63 1314 aaKnown RBP20.8■□□□□ 0.92
Usp43-202ENSMUST00000108677 Stag3O70576 1240 aa20.79■□□□□ 0.92
Usp43-202ENSMUST00000108677 Irx6Q9ER75 438 aa20.78■□□□□ 0.92
Usp43-202ENSMUST00000108677 Cc2d2aQ8CFW7 1633 aa20.77■□□□□ 0.91
Usp43-202ENSMUST00000108677 Hsp90ab1P11499 724 aaKnown RBP20.76■□□□□ 0.91
Usp43-202ENSMUST00000108677 Vsig10D3YX43 558 aa20.75■□□□□ 0.91
Usp43-202ENSMUST00000108677 Supt16hQ920B9 1047 aa20.74■□□□□ 0.91
Usp43-202ENSMUST00000108677 Zscan21Q07231 555 aa20.73■□□□□ 0.91
Usp43-202ENSMUST00000108677 Usp47Q8BY87 1376 aa20.73■□□□□ 0.91
Usp43-202ENSMUST00000108677 Nup155Q99P88 1391 aaKnown RBP20.7■□□□□ 0.9
Usp43-202ENSMUST00000108677 Sart1Q9Z315 806 aaKnown RBP20.7■□□□□ 0.9
Usp43-202ENSMUST00000108677 4930567H17RikQ3V0K5 233 aa20.69■□□□□ 0.9
Usp43-202ENSMUST00000108677 WrnO09053 1401 aa20.69■□□□□ 0.9
Usp43-202ENSMUST00000108677 Zfp644E9QA22 1323 aa20.69■□□□□ 0.9
Usp43-202ENSMUST00000108677 Gm6268A2A3U9 297 aa20.68■□□□□ 0.9
Usp43-202ENSMUST00000108677 Fgd1P52734 960 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms