RNA–Protein interactions for RNA: ENSMUST00000108460.7

Ercc2-202, Transcript of General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

TSL 1 (best) BASIC

Gene Ercc2, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2-202ENSMUST00000108460 Fam50aQ9WV03 339 aaKnown RBP16.8■□□□□ 0.28
Ercc2-202ENSMUST00000108460 Kif15Q6P9L6 1387 aa16.79■□□□□ 0.28
Ercc2-202ENSMUST00000108460 Cep162Q6ZQ06 1403 aa16.74■□□□□ 0.27
Ercc2-202ENSMUST00000108460 Frmpd1A2AKB4 1549 aa16.72■□□□□ 0.27
Ercc2-202ENSMUST00000108460 Top2aQ01320 1528 aaKnown RBP16.71■□□□□ 0.27
Ercc2-202ENSMUST00000108460 Ube2uB1AUC4 352 aa16.71■□□□□ 0.26
Ercc2-202ENSMUST00000108460 P3h3Q8CG70 732 aa16.71■□□□□ 0.26
Ercc2-202ENSMUST00000108460 Ubl4bQ9CQ84 188 aa16.68■□□□□ 0.26
Ercc2-202ENSMUST00000108460 Upf2A2AT37 1269 aaKnown RBP16.67■□□□□ 0.26
Ercc2-202ENSMUST00000108460 4933416C03RikQ3V063 378 aa16.66■□□□□ 0.26
Ercc2-202ENSMUST00000108460 Pak3Q61036 559 aa16.66■□□□□ 0.26
Ercc2-202ENSMUST00000108460 Ccdc27Q3V036 639 aa16.65■□□□□ 0.26
Ercc2-202ENSMUST00000108460 Ercc6F8VPZ5 1481 aa16.64■□□□□ 0.26
Ercc2-202ENSMUST00000108460 PtprkP35822 1457 aa16.63■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Rpap1Q80TE0 1409 aa16.63■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Slc4a3P16283 1227 aa16.62■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Ncapd3Q6ZQK0 1506 aa16.62■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Npm1Q61937 292 aaKnown RBP16.59■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Wdr62Q3U3T8 1523 aa16.59■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Gtf3c3Q3TMP1 882 aa16.58■□□□□ 0.25
Ercc2-202ENSMUST00000108460 Lmod2Q3UHZ5 550 aa16.57■□□□□ 0.24
Ercc2-202ENSMUST00000108460 NrdcQ8BHG1 1161 aa16.57■□□□□ 0.24
Ercc2-202ENSMUST00000108460 DaxxO35613 739 aa16.55■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Sin3aQ60520 1274 aaKnown RBP16.55■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Plcd4Q8K3R3 807 aa16.55■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Mrs2Q5NCE8 434 aa16.54■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Irx3P81067 507 aa16.54■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Hsp90aa1P07901 733 aaKnown RBP16.53■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Hspa5P20029 655 aaKnown RBP16.53■□□□□ 0.24
Ercc2-202ENSMUST00000108460 Gm13697A2AK42 830 aa16.49■□□□□ 0.23
Ercc2-202ENSMUST00000108460 Washc2Q6PGL7 1334 aa16.47■□□□□ 0.23
Ercc2-202ENSMUST00000108460 Cux2P70298 1426 aa16.45■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Setd5Q5XJV7 1441 aa16.45■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Arhgap35Q91YM2 1499 aa16.44■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Ccdc9Q8VC31 543 aaKnown RBP16.44■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Dnajc5bQ9CQ94 199 aa16.43■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Liat1Q810M6 228 aa16.42■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Ccdc18Q640L5 1455 aa16.41■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Baz1bQ9Z277 1479 aa16.4■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Unc13aQ4KUS2 1712 aa16.4■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Wwc2Q6NXJ0 1187 aa16.4■□□□□ 0.22
Ercc2-202ENSMUST00000108460 Smg6P61406 1418 aaKnown RBP16.39■□□□□ 0.22
Ercc2-202ENSMUST00000108460 BlmO88700 1416 aa16.39■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Ipo9Q91YE6 1041 aa16.39■□□□□ 0.21
Ercc2-202ENSMUST00000108460 TnnQ80Z71 1560 aa16.38■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Eea1Q8BL66 1411 aa16.37■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Phldb1Q6PDH0 1371 aaKnown RBP16.37■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Lamc3Q9R0B6 1581 aa16.37■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Ccer2J3QPU5 274 aa16.37■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Pknox2Q8BG99 474 aa16.37■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Fgd1P52734 960 aa16.36■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Camsap1A2AHC3 1581 aa16.36■□□□□ 0.21
Ercc2-202ENSMUST00000108460 Egfem1Q8C088 590 aa16.33■□□□□ 0.2
Ercc2-202ENSMUST00000108460 Arap1Q4LDD4 1452 aa16.32■□□□□ 0.2
Ercc2-202ENSMUST00000108460 Shroom4Q1W617 1475 aa16.31■□□□□ 0.2
Ercc2-202ENSMUST00000108460 ChgaP26339 463 aaKnown RBP16.29■□□□□ 0.2
Ercc2-202ENSMUST00000108460 Grin2bQ01097 1482 aa16.28■□□□□ 0.2
Ercc2-202ENSMUST00000108460 Tcerg1Q8CGF7 1100 aaKnown RBP16.28■□□□□ 0.2
Ercc2-202ENSMUST00000108460 Kcnh8P59111 1102 aa16.26■□□□□ 0.19
Ercc2-202ENSMUST00000108460 Exoc6Q8R313 802 aa16.26■□□□□ 0.19
Ercc2-202ENSMUST00000108460 Ofd1Q80Z25 1017 aa16.25■□□□□ 0.19
Ercc2-202ENSMUST00000108460 NrkQ9R0G8 1455 aa16.25■□□□□ 0.19
Ercc2-202ENSMUST00000108460 Eif4g1Q6NZJ6 1600 aaKnown RBP16.24■□□□□ 0.19
Ercc2-202ENSMUST00000108460 Slc4a2P13808 1237 aaKnown RBP16.23■□□□□ 0.19
Ercc2-202ENSMUST00000108460 LrpprcQ6PB66 1392 aaKnown RBP16.23■□□□□ 0.19
Ercc2-202ENSMUST00000108460 NeflP08551 543 aa16.22■□□□□ 0.19
Ercc2-202ENSMUST00000108460 AqrQ8CFQ3 1481 aaKnown RBP16.22■□□□□ 0.19
Ercc2-202ENSMUST00000108460 Arhgap27A2AB59 869 aa16.21■□□□□ 0.19
Ercc2-202ENSMUST00000108460 Chic2Q9D9G3 165 aa16.19■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Rad54l2Q99NG0 1466 aa16.19■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Iqcf3Q9D498 203 aa16.18■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Mroh2bQ7M6Y6 1581 aa16.17■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Dhx29Q6PGC1 1365 aaKnown RBP16.16■□□□□ 0.18
Ercc2-202ENSMUST00000108460 CanxP35564 591 aaKnown RBP16.16■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Thoc2B1AZI6 1594 aaKnown RBP16.16■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Duox2A2AQ99 1517 aa16.16■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Kdm5bQ80Y84 1544 aa16.15■□□□□ 0.18
Ercc2-202ENSMUST00000108460 UacaQ8CGB3 1411 aa16.15■□□□□ 0.18
Ercc2-202ENSMUST00000108460 Ipo4Q8VI75 1082 aa16.14■□□□□ 0.17
Ercc2-202ENSMUST00000108460 Arhgef5E9Q7D5 1581 aa16.11■□□□□ 0.17
Ercc2-202ENSMUST00000108460 Zbtb7cQ8VCZ7 619 aa16.1■□□□□ 0.17
Ercc2-202ENSMUST00000108460 Anp32bQ9EST5 272 aaKnown RBP16.1■□□□□ 0.17
Ercc2-202ENSMUST00000108460 Cux1P53564 1515 aa16.09■□□□□ 0.17
Ercc2-202ENSMUST00000108460 PogzQ8BZH4 1409 aaKnown RBP16.09■□□□□ 0.17
Ercc2-202ENSMUST00000108460 Gm13695A2AK44 830 aa16.09■□□□□ 0.17
Ercc2-202ENSMUST00000108460 Aebp1Q640N1 1128 aa16.08■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Naip1Q9QWK5 1403 aa16.08■□□□□ 0.16
Ercc2-202ENSMUST00000108460 B4galnt3Q6L8S8 986 aa16.06■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Ankrd26Q811D2 1581 aa16.05■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Rad21Q61550 635 aaKnown RBP16.04■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Carmil1Q6EDY6 1374 aa16.04■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Efcab5A0JP43 1406 aa16.04■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Pcf11G3X9Z4 1553 aa16.03■□□□□ 0.16
Ercc2-202ENSMUST00000108460 ArxO35085 564 aa16.03■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Map3k1P53349 1493 aa16.03■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Mia2Q91ZV0 1396 aa16.03■□□□□ 0.16
Ercc2-202ENSMUST00000108460 L3mbtl2P59178 703 aa16.03■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Slx4Q6P1D7 1565 aa16.02■□□□□ 0.16
Ercc2-202ENSMUST00000108460 Fkbp15Q6P9Q6 1216 aaKnown RBP16.02■□□□□ 0.15
Ercc2-202ENSMUST00000108460 Dbr1Q923B1 550 aa16.02■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms