RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Rad21Q61550 635 aaKnown RBP21.33■■□□□ 1.01
Sptbn4-204ENSMUST00000108364 Hspa5P20029 655 aaKnown RBP21.32■■□□□ 1
Sptbn4-204ENSMUST00000108364 Gm13697A2AK42 830 aa21.3■■□□□ 1
Sptbn4-204ENSMUST00000108364 Upf2A2AT37 1269 aaKnown RBP21.28■■□□□ 1
Sptbn4-204ENSMUST00000108364 Smarca2Q6DIC0 1577 aa21.28■■□□□ 1
Sptbn4-204ENSMUST00000108364 Ofd1Q80Z25 1017 aa21.28■■□□□ 1
Sptbn4-204ENSMUST00000108364 Ccdc9Q8VC31 543 aaKnown RBP21.27■■□□□ 1
Sptbn4-204ENSMUST00000108364 Ccdc27Q3V036 639 aa21.26■□□□□ 0.99
Sptbn4-204ENSMUST00000108364 Nlrp6Q91WS2 869 aa21.23■□□□□ 0.99
Sptbn4-204ENSMUST00000108364 Supt16hQ920B9 1047 aa21.21■□□□□ 0.99
Sptbn4-204ENSMUST00000108364 Prdm10Q3UTQ7 1184 aa21.2■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Crybg2B7ZCC2 1516 aa21.19■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Fmn1Q05860 1466 aa21.18■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Polr3glQ8R0C0 218 aa21.17■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Sin3aQ60520 1274 aaKnown RBP21.17■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Slc4a3P16283 1227 aa21.16■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Rgl3Q3UYI5 709 aa21.16■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Cecr2E9Q2Z1 1453 aa21.16■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Wwc2Q6NXJ0 1187 aa21.15■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 CanxP35564 591 aaKnown RBP21.14■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Kif15Q6P9L6 1387 aa21.14■□□□□ 0.98
Sptbn4-204ENSMUST00000108364 Erich6D3Z6S9 713 aa21.14■□□□□ 0.97
Sptbn4-204ENSMUST00000108364 Nolc1E9Q5C9 702 aaKnown RBP21.14■□□□□ 0.97
Sptbn4-204ENSMUST00000108364 Rapgef2Q8CHG7 1496 aa21.11■□□□□ 0.97
Sptbn4-204ENSMUST00000108364 Mia2Q91ZV0 1396 aa21.11■□□□□ 0.97
Sptbn4-204ENSMUST00000108364 CftrP26361 1476 aa21.09■□□□□ 0.97
Sptbn4-204ENSMUST00000108364 ScribQ80U72 1612 aa21.09■□□□□ 0.97
Sptbn4-204ENSMUST00000108364 Baz1bQ9Z277 1479 aa21.07■□□□□ 0.96
Sptbn4-204ENSMUST00000108364 Ubl4bQ9CQ84 188 aa21.07■□□□□ 0.96
Sptbn4-204ENSMUST00000108364 Fkbp15Q6P9Q6 1216 aaKnown RBP21.06■□□□□ 0.96
Sptbn4-204ENSMUST00000108364 Synj1Q8CHC4 1574 aa21.04■□□□□ 0.96
Sptbn4-204ENSMUST00000108364 Sycp2Q9CUU3 1500 aa21.02■□□□□ 0.96
Sptbn4-204ENSMUST00000108364 Grwd1Q810D6 446 aaKnown RBP20.98■□□□□ 0.95
Sptbn4-204ENSMUST00000108364 Exoc6Q8R313 802 aa20.98■□□□□ 0.95
Sptbn4-204ENSMUST00000108364 Ccdc18Q640L5 1455 aa20.97■□□□□ 0.95
Sptbn4-204ENSMUST00000108364 Cwc22Q8C5N3 908 aaKnown RBP20.96■□□□□ 0.95
Sptbn4-204ENSMUST00000108364 Card11Q8CIS0 1159 aa20.96■□□□□ 0.95
Sptbn4-204ENSMUST00000108364 Tcerg1Q8CGF7 1100 aaKnown RBP20.95■□□□□ 0.94
Sptbn4-204ENSMUST00000108364 Trim30dE9PWL0 497 aa20.95■□□□□ 0.94
Sptbn4-204ENSMUST00000108364 Irx3P81067 507 aa20.94■□□□□ 0.94
Sptbn4-204ENSMUST00000108364 Hsp90ab1P11499 724 aaKnown RBP20.9■□□□□ 0.94
Sptbn4-204ENSMUST00000108364 Rangap1P46061 589 aaKnown RBP20.87■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Apbb1Q9QXJ1 710 aa20.87■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Znf710Q3U288 666 aa20.86■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 B4galnt3Q6L8S8 986 aa20.86■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Dbr1Q923B1 550 aa20.86■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Ifnlr1Q8CGK5 535 aa20.85■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Arhgap35Q91YM2 1499 aa20.85■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Ipo9Q91YE6 1041 aa20.84■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Smg6P61406 1418 aaKnown RBP20.84■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Hdac5Q9Z2V6 1113 aa20.83■□□□□ 0.93
Sptbn4-204ENSMUST00000108364 Pkd2O35245 966 aa20.83■□□□□ 0.92
Sptbn4-204ENSMUST00000108364 Gm13695A2AK44 830 aa20.81■□□□□ 0.92
Sptbn4-204ENSMUST00000108364 Fyco1Q8VDC1 1437 aa20.81■□□□□ 0.92
Sptbn4-204ENSMUST00000108364 Clstn2Q9ER65 966 aa20.8■□□□□ 0.92
Sptbn4-204ENSMUST00000108364 Ppm1gQ61074 542 aa20.78■□□□□ 0.92
Sptbn4-204ENSMUST00000108364 Mphosph9A6H5Y1 991 aa20.76■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Aebp1Q640N1 1128 aa20.76■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 PrkcshO08795 521 aa20.75■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Trim26Q99PN3 545 aa20.74■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 CntlnA2AM05 1397 aa20.74■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Rundc1Q0VDN7 615 aa20.73■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Mtus2Q3UHD3 1353 aa20.73■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Atp1b4Q99ME6 356 aa20.72■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Neurod2Q62414 383 aa20.72■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 DekQ7TNV0 380 aaKnown RBP20.71■□□□□ 0.91
Sptbn4-204ENSMUST00000108364 Htatsf1Q8BGC0 757 aa20.69■□□□□ 0.9
Sptbn4-204ENSMUST00000108364 Vsig10D3YX43 558 aa20.69■□□□□ 0.9
Sptbn4-204ENSMUST00000108364 Ncapd3Q6ZQK0 1506 aa20.66■□□□□ 0.9
Sptbn4-204ENSMUST00000108364 Cabp1Q9JLK7 227 aa20.66■□□□□ 0.9
Sptbn4-204ENSMUST00000108364 ChgaP26339 463 aaKnown RBP20.64■□□□□ 0.9
Sptbn4-204ENSMUST00000108364 Chmp5Q9D7S9 219 aa20.63■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Arid4bA2CG63 1314 aaKnown RBP20.63■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Kdm2aP59997 1161 aa20.63■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Spryd3E9Q9B3 442 aa20.63■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Trim44Q9QXA7 346 aa20.63■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Cttnbp2B9EJA2 1648 aa20.62■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Dnai1Q8C0M8 701 aa20.62■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Kif27Q7M6Z4 1394 aa20.62■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Zscan21Q07231 555 aa20.62■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Ercc6F8VPZ5 1481 aa20.61■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Rwdd1Q9CQK7 243 aa20.61■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Mbd3Q9Z2D8 285 aaKnown RBP20.6■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Gtf3c3Q3TMP1 882 aa20.6■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Mak16Q8BGS0 296 aaKnown RBP20.59■□□□□ 0.89
Sptbn4-204ENSMUST00000108364 Mroh3A0A1D5RM54 893 aa20.57■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Armcx1Q9CX83 456 aa20.57■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Plcb2A3KGF7 1181 aa20.56■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Arhgap27A2AB59 869 aa20.55■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Cc2d2aQ8CFW7 1633 aa20.55■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 EspnQ9ET47 871 aa20.55■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Trak1Q6PD31 939 aa20.54■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Top2aQ01320 1528 aaKnown RBP20.53■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Pak3Q61036 559 aa20.52■□□□□ 0.88
Sptbn4-204ENSMUST00000108364 Rrp7aQ9D1C9 280 aaKnown RBP20.51■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Usp47Q8BY87 1376 aa20.49■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Carmil1Q6EDY6 1374 aa20.49■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 AU015836B2RUM3 263 aa20.49■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Smarca4Q3TKT4 1613 aaKnown RBP20.49■□□□□ 0.87
Sptbn4-204ENSMUST00000108364 Ccnb3Q810T2 1396 aa20.49■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms