RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Polr1aO35134 1717 aaKnown RBP16.76■□□□□ 0.27
Ebf3-202ENSMUST00000106118 Supt5hO55201 1082 aaKnown RBP16.75■□□□□ 0.27
Ebf3-202ENSMUST00000106118 Samd9lQ69Z37 1561 aa16.74■□□□□ 0.27
Ebf3-202ENSMUST00000106118 Rpap1Q80TE0 1409 aa16.74■□□□□ 0.27
Ebf3-202ENSMUST00000106118 Erich3F6QRE9 1637 aa16.72■□□□□ 0.27
Ebf3-202ENSMUST00000106118 Ankrd26Q811D2 1581 aa16.71■□□□□ 0.27
Ebf3-202ENSMUST00000106118 Fyco1Q8VDC1 1437 aa16.7■□□□□ 0.26
Ebf3-202ENSMUST00000106118 Rad54l2Q99NG0 1466 aa16.68■□□□□ 0.26
Ebf3-202ENSMUST00000106118 CntlnA2AM05 1397 aa16.67■□□□□ 0.26
Ebf3-202ENSMUST00000106118 Tiam1Q60610 1591 aa16.67■□□□□ 0.26
Ebf3-202ENSMUST00000106118 BlmO88700 1416 aa16.65■□□□□ 0.26
Ebf3-202ENSMUST00000106118 Plb1Q3TTY0 1478 aa16.65■□□□□ 0.26
Ebf3-202ENSMUST00000106118 Cux1P53564 1515 aa16.64■□□□□ 0.25
Ebf3-202ENSMUST00000106118 Pcf11G3X9Z4 1553 aa16.62■□□□□ 0.25
Ebf3-202ENSMUST00000106118 Naip1Q9QWK5 1403 aa16.61■□□□□ 0.25
Ebf3-202ENSMUST00000106118 Urb2E9Q7L1 1524 aaKnown RBP16.61■□□□□ 0.25
Ebf3-202ENSMUST00000106118 Ift140E9PY46 1464 aa16.6■□□□□ 0.25
Ebf3-202ENSMUST00000106118 EprsQ8CGC7 1512 aaKnown RBP16.59■□□□□ 0.25
Ebf3-202ENSMUST00000106118 Lmo7E9PYF4 1699 aaKnown RBP16.57■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Aebp1Q640N1 1128 aa16.57■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Grin2aP35436 1464 aa16.57■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Pla2r1Q62028 1487 aa16.56■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Ncapd3Q6ZQK0 1506 aa16.56■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Disp1Q3TDN0 1521 aa16.55■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Magi3Q9EQJ9 1476 aa16.54■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Lmod2Q3UHZ5 550 aa16.53■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Pbrm1Q8BSQ9 1634 aaKnown RBP16.52■□□□□ 0.24
Ebf3-202ENSMUST00000106118 Ppargc1bQ8VHJ7 1014 aa16.52■□□□□ 0.23
Ebf3-202ENSMUST00000106118 Peg3Q3URU2 1571 aa16.51■□□□□ 0.23
Ebf3-202ENSMUST00000106118 CadpsQ80TJ1 1355 aa16.5■□□□□ 0.23
Ebf3-202ENSMUST00000106118 Slx4Q6P1D7 1565 aa16.49■□□□□ 0.23
Ebf3-202ENSMUST00000106118 Gm7298A0A0N4SVU1 1476 aa16.49■□□□□ 0.23
Ebf3-202ENSMUST00000106118 Neurod1Q60867 357 aa16.47■□□□□ 0.23
Ebf3-202ENSMUST00000106118 Cc2d2bA0A286YDU8 1405 aa16.46■□□□□ 0.23
Ebf3-202ENSMUST00000106118 Nup160Q9Z0W3 1402 aaKnown RBP16.45■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Lrriq1Q0P5X1 1673 aa16.45■□□□□ 0.22
Ebf3-202ENSMUST00000106118 TchhA0A0B4J1F9 1599 aa16.45■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Kif27Q7M6Z4 1394 aa16.44■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Abca5Q8K448 1642 aa16.44■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Adamts12Q811B3 1600 aa16.43■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Soga1E1U8D0 1418 aa16.42■□□□□ 0.22
Ebf3-202ENSMUST00000106118 WizO88286 1684 aaKnown RBP16.41■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Gpatch8A2A6A1 1505 aa16.4■□□□□ 0.22
Ebf3-202ENSMUST00000106118 Fam50aQ9WV03 339 aaKnown RBP16.39■□□□□ 0.21
Ebf3-202ENSMUST00000106118 TonslQ6NZL6 1363 aa16.39■□□□□ 0.21
Ebf3-202ENSMUST00000106118 Gm1043A0A140LJC2 1431 aa16.37■□□□□ 0.21
Ebf3-202ENSMUST00000106118 Arhgap27A2AB59 869 aa16.35■□□□□ 0.21
Ebf3-202ENSMUST00000106118 Mia2Q91ZV0 1396 aa16.35■□□□□ 0.21
Ebf3-202ENSMUST00000106118 Setd1bQ8CFT2 1985 aa16.34■□□□□ 0.21
Ebf3-202ENSMUST00000106118 Ccer2J3QPU5 274 aa16.33■□□□□ 0.2
Ebf3-202ENSMUST00000106118 PxdnQ3UQ28 1475 aa16.33■□□□□ 0.2
Ebf3-202ENSMUST00000106118 WrnO09053 1401 aa16.32■□□□□ 0.2
Ebf3-202ENSMUST00000106118 CenpbP27790 599 aa16.31■□□□□ 0.2
Ebf3-202ENSMUST00000106118 Abca16E9PWJ7 1678 aa16.3■□□□□ 0.2
Ebf3-202ENSMUST00000106118 Gm38655A0A286YDK6 273 aa16.3■□□□□ 0.2
Ebf3-202ENSMUST00000106118 Ccnb3Q810T2 1396 aa16.28■□□□□ 0.2
Ebf3-202ENSMUST00000106118 Rusc2Q80U22 1514 aa16.27■□□□□ 0.2
Ebf3-202ENSMUST00000106118 Fhad1A6PWD2 1420 aa16.26■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Lmtk2Q3TYD6 1471 aa16.25■□□□□ 0.19
Ebf3-202ENSMUST00000106118 3425401B19RikD3Z1D3 1412 aa16.24■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Eif4g3Q80XI3 1579 aaKnown RBP16.24■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Kdm5bQ80Y84 1544 aa16.23■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Shroom2A2ALU4 1481 aa16.22■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Rapgef6Q5NCJ1 1609 aa16.21■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Vps8Q0P5W1 1427 aa16.21■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Dhx57Q6P5D3 1388 aaKnown RBP16.21■□□□□ 0.19
Ebf3-202ENSMUST00000106118 Ncoa2Q61026 1462 aa16.21■□□□□ 0.19
Ebf3-202ENSMUST00000106118 NexmifQ5DTT1 1515 aa16.21■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Ube2uB1AUC4 352 aa16.2■□□□□ 0.18
Ebf3-202ENSMUST00000106118 UacaQ8CGB3 1411 aa16.19■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Abcc2Q8VI47 1543 aa16.19■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Gcc2Q8CHG3 1679 aa16.18■□□□□ 0.18
Ebf3-202ENSMUST00000106118 BC005561E9Q5E2 1589 aa16.18■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Naip2Q9QUK4 1447 aa16.18■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Mug1P28665 1476 aa16.18■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Csrnp3P59055 597 aa16.17■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Eid3Q3V124 375 aa16.17■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Fgd6Q69ZL1 1399 aa16.16■□□□□ 0.18
Ebf3-202ENSMUST00000106118 NclP09405 707 aaKnown RBP16.15■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Arhgap31A6X8Z5 1425 aa16.15■□□□□ 0.18
Ebf3-202ENSMUST00000106118 A2mQ6GQT1 1474 aa16.15■□□□□ 0.18
Ebf3-202ENSMUST00000106118 Map3k4O08648 1597 aa16.14■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Ccdc141E9Q8Q6 1531 aa16.13■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Cdk11bP24788 784 aaKnown RBP16.13■□□□□ 0.17
Ebf3-202ENSMUST00000106118 ClspnQ80YR7 1315 aa16.13■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Ankrd36D3Z4K0 1415 aa16.12■□□□□ 0.17
Ebf3-202ENSMUST00000106118 AknaQ80VW7 1404 aa16.12■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Chic2Q9D9G3 165 aa16.11■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Jph4Q80WT0 628 aa16.11■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Sall2Q9QX96 1004 aa16.11■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Ncoa3O09000 1398 aa16.11■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Fam163aQ8CAA5 168 aa16.1■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Plekhh2Q8C115 1491 aa16.09■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Arhgef11Q68FM7 1552 aa16.09■□□□□ 0.17
Ebf3-202ENSMUST00000106118 Magi1Q6RHR9 1471 aa16.08■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Neo1P97798 1493 aa16.07■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Mtus2Q3UHD3 1353 aa16.07■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Dnmt1P13864 1620 aaKnown RBP16.07■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Rfx7F8VPJ6 1459 aa16.06■□□□□ 0.16
Ebf3-202ENSMUST00000106118 Aebp2Q9Z248 504 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms