RNA–Protein interactions for RNA: ENSMUST00000103008.11

Sdcbp-202, Transcript of Syntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sdcbp, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdcbp-202ENSMUST00000103008 EprsQ8CGC7 1512 aaKnown RBP14.33□□□□□ -0.11
Sdcbp-202ENSMUST00000103008 Lamc3Q9R0B6 1581 aa14.33□□□□□ -0.12
Sdcbp-202ENSMUST00000103008 Cc2d2bA0A286YDU8 1405 aa14.32□□□□□ -0.12
Sdcbp-202ENSMUST00000103008 Synj1Q8CHC4 1574 aa14.3□□□□□ -0.12
Sdcbp-202ENSMUST00000103008 Ttc37F8VPK0 1563 aa14.3□□□□□ -0.12
Sdcbp-202ENSMUST00000103008 Nup160Q9Z0W3 1402 aaKnown RBP14.27□□□□□ -0.12
Sdcbp-202ENSMUST00000103008 Setd1bQ8CFT2 1985 aa14.26□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 Clasp1Q80TV8 1535 aaKnown RBP14.26□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 Fndc1E9Q043 1732 aa14.26□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 Kdm6bQ5NCY0 1641 aa14.23□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 Chd1P40201 1711 aa14.23□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 Esf1Q3V1V3 845 aaKnown RBP14.22□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 AI481877A2ALV5 1481 aa14.21□□□□□ -0.13
Sdcbp-202ENSMUST00000103008 CadpsQ80TJ1 1355 aa14.2□□□□□ -0.14
Sdcbp-202ENSMUST00000103008 Depdc5P61460 1591 aa14.2□□□□□ -0.14
Sdcbp-202ENSMUST00000103008 Golga3P55937 1487 aa14.19□□□□□ -0.14
Sdcbp-202ENSMUST00000103008 Soga1E1U8D0 1418 aa14.19□□□□□ -0.14
Sdcbp-202ENSMUST00000103008 AqrQ8CFQ3 1481 aaKnown RBP14.14□□□□□ -0.15
Sdcbp-202ENSMUST00000103008 PogzQ8BZH4 1409 aaKnown RBP14.13□□□□□ -0.15
Sdcbp-202ENSMUST00000103008 PtprmP28828 1452 aa14.13□□□□□ -0.15
Sdcbp-202ENSMUST00000103008 Arid3cA6PWV5 409 aa14.13□□□□□ -0.15
Sdcbp-202ENSMUST00000103008 Ccdc18Q640L5 1455 aa14.13□□□□□ -0.15
Sdcbp-202ENSMUST00000103008 Rhox8Q6VSS7 320 aa14.12□□□□□ -0.15
Sdcbp-202ENSMUST00000103008 Zfyve16Q80U44 1528 aa14.07□□□□□ -0.16
Sdcbp-202ENSMUST00000103008 NrkQ9R0G8 1455 aa14.07□□□□□ -0.16
Sdcbp-202ENSMUST00000103008 Pbrm1Q8BSQ9 1634 aaKnown RBP14.06□□□□□ -0.16
Sdcbp-202ENSMUST00000103008 Ildr2B5TVM2 661 aa14.05□□□□□ -0.16
Sdcbp-202ENSMUST00000103008 Duox2A2AQ99 1517 aa14.05□□□□□ -0.16
Sdcbp-202ENSMUST00000103008 Naip2Q9QUK4 1447 aa14.01□□□□□ -0.17
Sdcbp-202ENSMUST00000103008 Neo1P97798 1493 aa14.01□□□□□ -0.17
Sdcbp-202ENSMUST00000103008 MyclP10166 368 aa14□□□□□ -0.17
Sdcbp-202ENSMUST00000103008 Gm14025A2AP89 1413 aa13.97□□□□□ -0.17
Sdcbp-202ENSMUST00000103008 Rad54l2Q99NG0 1466 aa13.95□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Hspa1lP16627 641 aa13.94□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Brd4Q9ESU6 1400 aaKnown RBP13.93□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Ahdc1Q6PAL7 1594 aaKnown RBP13.92□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Grin2aP35436 1464 aa13.92□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Samd9lQ69Z37 1561 aa13.91□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Fbln2P37889 1221 aa13.91□□□□□ -0.18
Sdcbp-202ENSMUST00000103008 Rnf17Q99MV7 1640 aa13.89□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 Dnmt1P13864 1620 aaKnown RBP13.87□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 Magi3Q9EQJ9 1476 aa13.86□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 Pip4k2bQ80XI4 416 aa13.86□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 Arhgef12Q8R4H2 1543 aaKnown RBP13.85□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 SphkapQ6NSW3 1687 aa13.85□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 Arhgap27A2AB59 869 aa13.84□□□□□ -0.19
Sdcbp-202ENSMUST00000103008 Iqsec2Q5DU25 1478 aa13.83□□□□□ -0.2
Sdcbp-202ENSMUST00000103008 Fkbp15Q6P9Q6 1216 aaKnown RBP13.82□□□□□ -0.2
Sdcbp-202ENSMUST00000103008 BC005561E9Q5E2 1589 aa13.8□□□□□ -0.2
Sdcbp-202ENSMUST00000103008 Scn4aQ9ER60 1841 aa13.78□□□□□ -0.2
Sdcbp-202ENSMUST00000103008 Lrrc9Q8CDN9 1456 aa13.78□□□□□ -0.2
Sdcbp-202ENSMUST00000103008 Ncoa1P70365 1447 aa13.77□□□□□ -0.2
Sdcbp-202ENSMUST00000103008 Neurl4Q5NCX5 1563 aa13.77□□□□□ -0.21
Sdcbp-202ENSMUST00000103008 Znf608Q56A10 1511 aa13.76□□□□□ -0.21
Sdcbp-202ENSMUST00000103008 Atp10aO54827 1508 aa13.69□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 TnnQ80Z71 1560 aa13.68□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Abcc2Q8VI47 1543 aa13.68□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Camsap2Q8C1B1 1461 aa13.68□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 AglF8VPN4 1532 aa13.68□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Map3k4O08648 1597 aa13.67□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Zranb1Q7M760 708 aa13.67□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Dip2aQ8BWT5 1523 aa13.67□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Jph4Q80WT0 628 aa13.65□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Igf1rQ60751 1373 aa13.65□□□□□ -0.22
Sdcbp-202ENSMUST00000103008 Safb2Q80YR5 991 aaKnown RBP13.62□□□□□ -0.23
Sdcbp-202ENSMUST00000103008 Pla2r1Q62028 1487 aa13.62□□□□□ -0.23
Sdcbp-202ENSMUST00000103008 Grin2bQ01097 1482 aa13.61□□□□□ -0.23
Sdcbp-202ENSMUST00000103008 Efcab5A0JP43 1406 aa13.57□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Bcl11bQ99PV8 884 aa13.57□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Qser1A2BIE1 1698 aa13.57□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Shroom4Q1W617 1475 aa13.57□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Ltbp4Q8K4G1 1666 aa13.56□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Adamtsl3G3UXC7 1706 aa13.56□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 PxdnQ3UQ28 1475 aa13.55□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Wdr7Q920I9 1489 aa13.55□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Ccdc136Q3TVA9 1136 aa13.54□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Med1Q925J9 1575 aa13.53□□□□□ -0.24
Sdcbp-202ENSMUST00000103008 Kif14L0N7N1 1674 aaKnown RBP13.52□□□□□ -0.25
Sdcbp-202ENSMUST00000103008 Slx4Q6P1D7 1565 aa13.51□□□□□ -0.25
Sdcbp-202ENSMUST00000103008 Abca16E9PWJ7 1678 aa13.51□□□□□ -0.25
Sdcbp-202ENSMUST00000103008 Rapgefl1Q68EF8 662 aa13.49□□□□□ -0.25
Sdcbp-202ENSMUST00000103008 Gpatch8A2A6A1 1505 aa13.49□□□□□ -0.25
Sdcbp-202ENSMUST00000103008 Eif4g1Q6NZJ6 1600 aaKnown RBP13.46□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 NinlQ6ZQ12 1394 aa13.45□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Gemin5Q8BX17 1502 aaKnown RBP13.44□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 A2mQ6GQT1 1474 aa13.44□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 OvosQ3UU35 1456 aa13.43□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 TchhA0A0B4J1F9 1599 aa13.42□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 WizO88286 1684 aaKnown RBP13.42□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Cypt2Q6P924 180 aa13.41□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Slit2Q9R1B9 1521 aa13.41□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Supt6hQ62383 1726 aaKnown RBP13.41□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Gli3Q61602 1583 aa13.4□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Kdm5bQ80Y84 1544 aa13.4□□□□□ -0.26
Sdcbp-202ENSMUST00000103008 Synj2Q9D2G5 1434 aa13.36□□□□□ -0.27
Sdcbp-202ENSMUST00000103008 Kdm2bQ6P1G2 1309 aa13.36□□□□□ -0.27
Sdcbp-202ENSMUST00000103008 Abca8bQ8K440 1620 aa13.35□□□□□ -0.27
Sdcbp-202ENSMUST00000103008 Atp10dQ8K2X1 1416 aa13.35□□□□□ -0.27
Sdcbp-202ENSMUST00000103008 Nyap1Q6PFX7 833 aa13.35□□□□□ -0.27
Sdcbp-202ENSMUST00000103008 4930407I10RikD3Z5T8 1512 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms